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The structure of a Ty3 retrotransposon icosahedral capsid

Electron Microscopy
7.5Å resolution
PDB entry 6r24 coloured by chain, front view.
PDB entry 6r24 coloured by chain, side view.
PDB entry 6r24 coloured by chain, top view.
Source organism: Saccharomyces cerevisiae S288C
Assembly composition:
homo 540-mer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Capsid protein
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Multimeric state: homo 540-mer
PDBe Complex ID: PDB-CPX-181653

Macromolecules

Capsid protein
Chains: A, B, C, D, E, F, G, H, I
Length: 309 amino acids
Theoretical weight: 36.38 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Saccharomyces cerevisiae
UniProt:
  • Canonical: Q7LHG5 (Residues: 1-309; Coverage: 21%)
Gene names: TY3B-I, YIL082W-A, YILWTy3-1 POL
Pfam: Ty3 transposon capsid-like protein
InterPro:
Capsid protein in PDB entry 6r24, assembly 1, front view.
Capsid protein in PDB entry 6r24, assembly 1, side view.
Capsid protein in PDB entry 6r24, assembly 1, top view.
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