6roj

Electron Microscopy
2.9Å resolution

Cryo-EM structure of the activated Drs2p-Cdc50p

Released:

Function and Biology Details

Reactions catalysed:
Oxaloacetate + 2 Na(+)(Side 1) = pyruvate + CO(2) + 2 Na(+)(Side 2)
ATP + H(2)O + phospholipid(Side 1) = ADP + phosphate + phospholipid(Side 2)
Biochemical function:
Biological process:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-146492 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (4 distinct):
Oxaloacetate decarboxylase alpha chain; Phospholipid-transporting ATPase DRS2 Chain: A
Molecule details ›
Chain: A
Length: 1465 amino acids
Theoretical weight: 164.24 KDa
Source organisms: Expression system: Saccharomyces cerevisiae S288C
UniProt:
  • Canonical: P39524 (Residues: 1-1246, 1247-1355; Coverage: 100%)
  • Canonical: P13187 (Residues: 508-593; Coverage: 14%)
Gene names: DRS2, FUN38, SWA3, YAL026C, oadA
Sequence domains:
Phospholipid-transporting ATPase accessory subunit CDC50 Chain: C
Molecule details ›
Chain: C
Length: 413 amino acids
Theoretical weight: 47.37 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Saccharomyces cerevisiae S288C
UniProt:
  • Canonical: P25656 (Residues: 1-391; Coverage: 100%)
Gene names: CDC50, SWA4, YCR094W, YCR94W
Sequence domains: LEM3 (ligand-effect modulator 3) family / CDC50 family

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG
2 bound ligands:
1 modified residue:

Experiments and Validation Details

Entry percentile scores
Resolution: 2.9Å
Relevant EMDB volumes: EMD-4974
Expression system: Saccharomyces cerevisiae S288C