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Crystal structure of human BCL6 BTB domain in complex with compound 1

X-ray diffraction
1.9Å resolution
PDB entry 6tom coloured by chain, front view.
PDB entry 6tom coloured by chain, side view.
PDB entry 6tom coloured by chain, top view.
Source organism: Homo sapiens
Assembly composition:
homo dimer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: B-cell lymphoma 6 protein
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Multimeric state: homo dimer
Accessible surface area: 13355.46 Å2
Buried surface area: 5290.62 Å2
Dissociation area: 2,098.6 Å2
Dissociation energy (ΔGdiss): 31.56 kcal/mol
Dissociation entropy (TΔSdiss): 12.48 kcal/mol
Symmetry number: 2
PDBe Complex ID: PDB-CPX-154263

Macromolecules

B-cell lymphoma 6 protein
Chain: A
Length: 144 amino acids
Theoretical weight: 16.5 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P41182 (Residues: 5-129; Coverage: 18%)
Gene names: BCL5, BCL6, LAZ3, ZBTB27, ZNF51
Pfam: BTB/POZ domain
InterPro:
B-cell lymphoma 6 protein in PDB entry 6tom, assembly 1, front view.
B-cell lymphoma 6 protein in PDB entry 6tom, assembly 1, side view.
B-cell lymphoma 6 protein in PDB entry 6tom, assembly 1, top view.
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