6ub0 Citations

Structural insights into β-1,3-glucan cleavage by a glycoside hydrolase family.

Abstract

The fundamental and assorted roles of β-1,3-glucans in nature are underpinned on diverse chemistry and molecular structures, demanding sophisticated and intricate enzymatic systems for their processing. In this work, the selectivity and modes of action of a glycoside hydrolase family active on β-1,3-glucans were systematically investigated combining sequence similarity network, phylogeny, X-ray crystallography, enzyme kinetics, mutagenesis and molecular dynamics. This family exhibits a minimalist and versatile (α/β)-barrel scaffold, which can harbor distinguishing exo or endo modes of action, including an ancillary-binding site for the anchoring of triple-helical β-1,3-glucans. The substrate binding occurs via a hydrophobic knuckle complementary to the canonical curved conformation of β-1,3-glucans or through a substrate conformational change imposed by the active-site topology of some fungal enzymes. Together, these findings expand our understanding of the enzymatic arsenal of bacteria and fungi for the breakdown and modification of β-1,3-glucans, which can be exploited for biotechnological applications.

Reviews citing this publication (5)

  1. Discovery of new enzymatic functions and metabolic pathways using genomic enzymology web tools. Zallot R, Oberg N, Gerlt JA. Curr Opin Biotechnol 69 77-90 (2021)
  2. Fungal Biofilms as a Valuable Target for the Discovery of Natural Products That Cope with the Resistance of Medically Important Fungi-Latest Findings. Butassi E, Svetaz L, Carpinella MC, Efferth T, Zacchino S. Antibiotics (Basel) 10 1053 (2021)
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  1. Gut microbiome of the largest living rodent harbors unprecedented enzymatic systems to degrade plant polysaccharides. Cabral L, Persinoti GF, Paixão DAA, Martins MP, Morais MAB, Chinaglia M, Domingues MN, Sforca ML, Pirolla RAS, Generoso WC, Santos CA, Maciel LF, Terrapon N, Lombard V, Henrissat B, Murakami MT. Nat Commun 13 629 (2022)
  2. An objective criterion to evaluate sequence-similarity networks helps in dividing the protein family sequence space. Hornung BVH, Terrapon N. PLoS Comput Biol 19 e1010881 (2023)
  3. Structural basis for glucosylsucrose synthesis by a member of the α-1,2-glucosyltransferase family. Han Q, Yao Y, Liu Y, Zhang W, Yu J, Na H, Liu T, Mayo KH, Su J. Acta Biochim Biophys Sin (Shanghai) 54 537-547 (2022)