6um5

Electron Microscopy
4.2Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dodecamer (preferred)
PDBe Complex ID:
PDB-CPX-207411 (preferred)
Entry contents:
4 distinct polypeptide molecules
Macromolecules (8 distinct):
Envelope glycoprotein gp160 Chains: A, E, I
Molecule details ›
Chains: A, E, I
Length: 462 amino acids
Theoretical weight: 51.69 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:
  • Canonical: A0A1W6IPB2 (Residues: 30-489; Coverage: 54%)
Gene name: env
Sequence domains: Envelope glycoprotein GP120
Transmembrane protein gp41 Chains: B, F, J
Molecule details ›
Chains: B, F, J
Length: 153 amino acids
Theoretical weight: 17.16 KDa
Source organism: Human immunodeficiency virus 1
Expression system: Homo sapiens
UniProt:
  • Canonical: Q2N0S7 (Residues: 509-661; Coverage: 18%)
Gene name: env
Sequence domains: Retroviral envelope protein
DH270 UCA3 Fab Heavy Chain Chains: C, G, K
Molecule details ›
Chains: C, G, K
Length: 238 amino acids
Theoretical weight: 25.78 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
DH270 UCA3 Fab Light Chain Chains: D, H, L
Molecule details ›
Chains: D, H, L
Length: 216 amino acids
Theoretical weight: 22.65 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
Carbohydrate polymer : NEW Components: NAG, BMA, MAN
Carbohydrate polymer : NEW Components: NAG, BMA
Carbohydrate polymer : NEW Components: NAG, BMA
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 4.2Å
Relevant EMDB volumes: EMD-20817
Expression system: Homo sapiens