Assemblies
Assembly Name:
ribosomal protein and RNA
Multimeric state:
hetero 52-mer
Accessible surface area:
775750.36 Å2
Buried surface area:
250909.85 Å2
Dissociation area:
762
Å2
Dissociation energy (ΔGdiss):
4.02
kcal/mol
Dissociation entropy (TΔSdiss):
10.88
kcal/mol
Symmetry number:
1
PDBe Complex ID:
PDB-CPX-135535
Macromolecules
Chain: b
Length: 271 amino acids
Theoretical weight: 29.66 KDa
Source organism: Escherichia coli
UniProt:
Pfam:
InterPro:
Length: 271 amino acids
Theoretical weight: 29.66 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P60422 (Residues: 2-272; Coverage: 99%)
Pfam:
InterPro:
- Nucleic acid-binding, OB-fold
- Large ribosomal subunit protein uL2, bacterial/organellar-type
- Large ribosomal subunit protein uL2
- Large ribosomal subunit protein uL2, RNA-binding domain
- Large ribosomal subunit protein uL2, domain 2
- Large ribosomal subunit protein uL2, C-terminal
- Translation protein SH3-like domain superfamily
- Large ribosomal subunit protein uL2, domain 3
- Large ribosomal subunit protein uL2, conserved site
Chain: c
Length: 209 amino acids
Theoretical weight: 22.28 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L3
InterPro:
Length: 209 amino acids
Theoretical weight: 22.28 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P60438 (Residues: 1-209; Coverage: 100%)
Pfam: Ribosomal protein L3
InterPro:
Chain: d
Length: 201 amino acids
Theoretical weight: 22.12 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L4/L1 family
InterPro:
Length: 201 amino acids
Theoretical weight: 22.12 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P60723 (Residues: 1-201; Coverage: 100%)
Pfam: Ribosomal protein L4/L1 family
InterPro:
Chain: e
Length: 177 amino acids
Theoretical weight: 20.07 KDa
Source organism: Escherichia coli
UniProt:
Pfam:
InterPro:
Length: 177 amino acids
Theoretical weight: 20.07 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P62399 (Residues: 2-178; Coverage: 99%)
Pfam:
InterPro:
Chain: f
Length: 176 amino acids
Theoretical weight: 18.8 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L6
InterPro:
Length: 176 amino acids
Theoretical weight: 18.8 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0AG55 (Residues: 2-177; Coverage: 99%)
Pfam: Ribosomal protein L6
InterPro:
Chain: g
Length: 149 amino acids
Theoretical weight: 15.79 KDa
Source organism: Escherichia coli
UniProt:
Pfam:
InterPro:
Length: 149 amino acids
Theoretical weight: 15.79 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7R1 (Residues: 1-149; Coverage: 100%)
Pfam:
InterPro:
- Large ribosomal subunit protein bL9
- Large ribosomal subunit protein bL9/RNase H1, N-terminal
- Large ribosomal subunit protein bL9, N-terminal
- Large ribosomal subunit protein bL9, bacteria/chloroplast
- Large ribosomal subunit protein bL9, N-terminal domain superfamily
- Large ribosomal subunit protein bL9, C-terminal domain superfamily
- Large ribosomal subunit protein bL9, C-terminal
Chain: h
Length: 131 amino acids
Theoretical weight: 14.11 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L10
InterPro:
Length: 131 amino acids
Theoretical weight: 14.11 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7J3 (Residues: 1-131; Coverage: 79%)
Pfam: Ribosomal protein L10
InterPro:
Chain: i
Length: 141 amino acids
Theoretical weight: 14.76 KDa
Source organism: Escherichia coli
UniProt:
Pfam:
InterPro:
Length: 141 amino acids
Theoretical weight: 14.76 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7J7 (Residues: 2-142; Coverage: 99%)
Pfam:
InterPro:
- Large ribosomal subunit protein uL11, N-terminal domain superfamily
- Ribosomal protein uL11
- Large ribosomal subunit protein uL11, bacterial-type
- Large ribosomal subunit protein uL11, N-terminal
- Large ribosomal subunit protein uL11, C-terminal domain superfamily
- Large ribosomal subunit protein uL11, C-terminal
- Large ribosomal subunit protein uL11, conserved site
Chain: j
Length: 142 amino acids
Theoretical weight: 16.05 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L13
InterPro:
Length: 142 amino acids
Theoretical weight: 16.05 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0AA10 (Residues: 1-142; Coverage: 100%)
Pfam: Ribosomal protein L13
InterPro:
Chain: k
Length: 122 amino acids
Theoretical weight: 13.45 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L14p/L23e
InterPro:
Length: 122 amino acids
Theoretical weight: 13.45 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0ADY3 (Residues: 1-122; Coverage: 99%)
Pfam: Ribosomal protein L14p/L23e
InterPro:
Chain: l
Length: 143 amino acids
Theoretical weight: 14.88 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
InterPro:
Length: 143 amino acids
Theoretical weight: 14.88 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P02413 (Residues: 2-144; Coverage: 99%)
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
InterPro:
Chain: n
Length: 120 amino acids
Theoretical weight: 13.72 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L17
InterPro:
Length: 120 amino acids
Theoretical weight: 13.72 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0AG44 (Residues: 1-120; Coverage: 95%)
Pfam: Ribosomal protein L17
InterPro:
Chain: o
Length: 116 amino acids
Theoretical weight: 12.66 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
InterPro:
Length: 116 amino acids
Theoretical weight: 12.66 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0C018 (Residues: 2-117; Coverage: 99%)
Pfam: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
InterPro:
Chain: p
Length: 114 amino acids
Theoretical weight: 13.03 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L19
InterPro:
Length: 114 amino acids
Theoretical weight: 13.03 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7K6 (Residues: 2-115; Coverage: 99%)
Pfam: Ribosomal protein L19
InterPro:
Chain: q
Length: 117 amino acids
Theoretical weight: 13.4 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L20
InterPro:
Length: 117 amino acids
Theoretical weight: 13.4 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7L3 (Residues: 2-118; Coverage: 99%)
Pfam: Ribosomal protein L20
InterPro:
Chain: r
Length: 103 amino acids
Theoretical weight: 11.59 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal prokaryotic L21 protein
InterPro:
Length: 103 amino acids
Theoretical weight: 11.59 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0AG48 (Residues: 1-103; Coverage: 100%)
Pfam: Ribosomal prokaryotic L21 protein
InterPro:
Chain: s
Length: 110 amino acids
Theoretical weight: 12.25 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L22p/L17e
InterPro:
Length: 110 amino acids
Theoretical weight: 12.25 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P61175 (Residues: 1-110; Coverage: 100%)
Pfam: Ribosomal protein L22p/L17e
InterPro:
Chain: t
Length: 93 amino acids
Theoretical weight: 10.55 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L23
InterPro:
Length: 93 amino acids
Theoretical weight: 10.55 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0ADZ0 (Residues: 1-93; Coverage: 93%)
Pfam: Ribosomal protein L23
InterPro:
Chain: u
Length: 102 amino acids
Theoretical weight: 11.08 KDa
Source organism: Escherichia coli
UniProt:
Pfam:
InterPro:
Length: 102 amino acids
Theoretical weight: 11.08 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P60624 (Residues: 2-103; Coverage: 98%)
Pfam:
InterPro:
Chain: v
Length: 94 amino acids
Theoretical weight: 10.71 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal L25p family
InterPro:
Length: 94 amino acids
Theoretical weight: 10.71 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P68919 (Residues: 1-94; Coverage: 100%)
Pfam: Ribosomal L25p family
InterPro:
Chain: w
Length: 75 amino acids
Theoretical weight: 8.17 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal L27 protein
InterPro:
Length: 75 amino acids
Theoretical weight: 8.17 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7L8 (Residues: 11-85; Coverage: 88%)
Pfam: Ribosomal L27 protein
InterPro:
Chain: x
Length: 77 amino acids
Theoretical weight: 8.9 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal L28 family
InterPro:
Length: 77 amino acids
Theoretical weight: 8.9 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7M2 (Residues: 2-78; Coverage: 99%)
Pfam: Ribosomal L28 family
InterPro:
Chain: y
Length: 63 amino acids
Theoretical weight: 7.29 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal L29 protein
InterPro:
Length: 63 amino acids
Theoretical weight: 7.29 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7M6 (Residues: 1-63; Coverage: 100%)
Pfam: Ribosomal L29 protein
InterPro:
Chain: z
Length: 58 amino acids
Theoretical weight: 6.42 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L30p/L7e
InterPro:
Length: 58 amino acids
Theoretical weight: 6.42 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0AG51 (Residues: 2-59; Coverage: 98%)
Pfam: Ribosomal protein L30p/L7e
InterPro:
Chain: A
Length: 70 amino acids
Theoretical weight: 7.89 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L31
InterPro:
Length: 70 amino acids
Theoretical weight: 7.89 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7M9 (Residues: 1-70; Coverage: 100%)
Pfam: Ribosomal protein L31
InterPro:
Chain: B
Length: 56 amino acids
Theoretical weight: 6.33 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal L32p protein family
InterPro:
Length: 56 amino acids
Theoretical weight: 6.33 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7N4 (Residues: 2-57; Coverage: 98%)
Pfam: Ribosomal L32p protein family
InterPro:
Chain: D
Length: 46 amino acids
Theoretical weight: 5.4 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L34
InterPro:
Length: 46 amino acids
Theoretical weight: 5.4 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7P5 (Residues: 1-46; Coverage: 100%)
Pfam: Ribosomal protein L34
InterPro:
Chain: E
Length: 64 amino acids
Theoretical weight: 7.18 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L35
InterPro:
Length: 64 amino acids
Theoretical weight: 7.18 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7Q1 (Residues: 2-65; Coverage: 99%)
Pfam: Ribosomal protein L35
InterPro:
Chain: F
Length: 38 amino acids
Theoretical weight: 4.38 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L36
InterPro:
Length: 38 amino acids
Theoretical weight: 4.38 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7Q6 (Residues: 1-38; Coverage: 100%)
Pfam: Ribosomal protein L36
InterPro:
Chain: G
Length: 225 amino acids
Theoretical weight: 25.02 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S2
InterPro:
Length: 225 amino acids
Theoretical weight: 25.02 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7V0 (Residues: 2-226; Coverage: 93%)
Pfam: Ribosomal protein S2
InterPro:
Chain: H
Length: 206 amino acids
Theoretical weight: 23.08 KDa
Source organism: Escherichia coli
UniProt:
Pfam:
InterPro:
Length: 206 amino acids
Theoretical weight: 23.08 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7V3 (Residues: 2-207; Coverage: 88%)
Pfam:
InterPro:
- Small ribosomal subunit protein uS3, bacterial-type
- K homology domain superfamily, prokaryotic type
- K homology domain-like, alpha/beta
- K Homology domain, type 2
- K Homology domain
- Ribosomal protein S3, C-terminal domain superfamily
- Small ribosomal subunit protein uS3, C-terminal
- Small ribosomal subunit protein uS3, conserved site
Chain: J
Length: 157 amino acids
Theoretical weight: 16.53 KDa
Source organism: Escherichia coli
UniProt:
Pfam:
InterPro:
Length: 157 amino acids
Theoretical weight: 16.53 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7W1 (Residues: 10-166; Coverage: 94%)
Pfam:
InterPro:
- Small ribosomal subunit protein uS5, bacterial-type
- Small ribosomal subunit protein uS5, N-terminal
- Small ribosomal subunit protein uS5
- Small ribosomal subunit protein uS5, N-terminal, conserved site
- Small ribosomal subunit protein uS5 domain 2-type fold, subgroup
- Ribosomal protein uS5 domain 2-type superfamily
- Small ribosomal subunit protein uS5, C-terminal
Chain: K
Length: 100 amino acids
Theoretical weight: 11.67 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S6
InterPro:
Length: 100 amino acids
Theoretical weight: 11.67 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P02358 (Residues: 1-100; Coverage: 74%)
Pfam: Ribosomal protein S6
InterPro:
Chain: L
Length: 151 amino acids
Theoretical weight: 16.86 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S7p/S5e
InterPro:
Length: 151 amino acids
Theoretical weight: 16.86 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P02359 (Residues: 2-152; Coverage: 84%)
Pfam: Ribosomal protein S7p/S5e
InterPro:
Chain: M
Length: 129 amino acids
Theoretical weight: 14.02 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S8
InterPro:
Length: 129 amino acids
Theoretical weight: 14.02 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7W7 (Residues: 2-130; Coverage: 99%)
Pfam: Ribosomal protein S8
InterPro:
Chain: N
Length: 127 amino acids
Theoretical weight: 14.55 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S9/S16
InterPro:
Length: 127 amino acids
Theoretical weight: 14.55 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7X3 (Residues: 4-130; Coverage: 98%)
Pfam: Ribosomal protein S9/S16
InterPro:
Chain: O
Length: 98 amino acids
Theoretical weight: 11.2 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S10p/S20e
InterPro:
Length: 98 amino acids
Theoretical weight: 11.2 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7R5 (Residues: 5-102; Coverage: 95%)
Pfam: Ribosomal protein S10p/S20e
InterPro:
Chain: P
Length: 116 amino acids
Theoretical weight: 12.39 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S11
InterPro:
Length: 116 amino acids
Theoretical weight: 12.39 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7R9 (Residues: 13-128; Coverage: 90%)
Pfam: Ribosomal protein S11
InterPro:
Chain: Q
Length: 123 amino acids
Theoretical weight: 13.64 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S12/S23
InterPro:
Length: 123 amino acids
Theoretical weight: 13.64 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7S3 (Residues: 2-124; Coverage: 99%)
Pfam: Ribosomal protein S12/S23
InterPro:
Chain: R
Length: 114 amino acids
Theoretical weight: 12.63 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S13/S18
InterPro:
Length: 114 amino acids
Theoretical weight: 12.63 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7S9 (Residues: 2-115; Coverage: 97%)
Pfam: Ribosomal protein S13/S18
InterPro:
Chain: S
Length: 100 amino acids
Theoretical weight: 11.48 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S14p/S29e
InterPro:
Length: 100 amino acids
Theoretical weight: 11.48 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0AG59 (Residues: 2-101; Coverage: 99%)
Pfam: Ribosomal protein S14p/S29e
InterPro:
Chain: T
Length: 88 amino acids
Theoretical weight: 10.16 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S15
InterPro:
Length: 88 amino acids
Theoretical weight: 10.16 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0ADZ4 (Residues: 2-89; Coverage: 99%)
Pfam: Ribosomal protein S15
InterPro:
Chain: U
Length: 82 amino acids
Theoretical weight: 9.21 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S16
InterPro:
Length: 82 amino acids
Theoretical weight: 9.21 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7T3 (Residues: 1-82; Coverage: 100%)
Pfam: Ribosomal protein S16
InterPro:
Chain: V
Length: 80 amino acids
Theoretical weight: 9.26 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S17
InterPro:
Length: 80 amino acids
Theoretical weight: 9.26 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0AG63 (Residues: 4-83; Coverage: 95%)
Pfam: Ribosomal protein S17
InterPro:
Chain: W
Length: 65 amino acids
Theoretical weight: 7.61 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S18
InterPro:
Length: 65 amino acids
Theoretical weight: 7.61 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7T7 (Residues: 10-74; Coverage: 87%)
Pfam: Ribosomal protein S18
InterPro:
Chain: X
Length: 79 amino acids
Theoretical weight: 9.06 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S19
InterPro:
Length: 79 amino acids
Theoretical weight: 9.06 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7U3 (Residues: 3-81; Coverage: 86%)
Pfam: Ribosomal protein S19
InterPro:
Chain: Y
Length: 85 amino acids
Theoretical weight: 9.51 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S20
InterPro:
Length: 85 amino acids
Theoretical weight: 9.51 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7U7 (Residues: 3-87; Coverage: 98%)
Pfam: Ribosomal protein S20
InterPro:
Chain: Z
Length: 65 amino acids
Theoretical weight: 7.76 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein S21
InterPro:
Length: 65 amino acids
Theoretical weight: 7.76 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P68679 (Residues: 4-68; Coverage: 92%)
Pfam: Ribosomal protein S21
InterPro:
Chain: a
Length: 223 amino acids
Theoretical weight: 23.74 KDa
Source organism: Escherichia coli
UniProt:
Pfam: Ribosomal protein L1p/L10e family
InterPro:
Length: 223 amino acids
Theoretical weight: 23.74 KDa
Source organism: Escherichia coli
UniProt:
- Canonical:
P0A7L0 (Residues: 3-225; Coverage: 95%)
Pfam: Ribosomal protein L1p/L10e family
InterPro:
Name:
16S ribosomal RNA
Representative chains: 3
Length: 1539 nucleotides
Theoretical weight: 498.73 KDa
Rfam: Bacterial small subunit ribosomal RNA
Representative chains: 3
Length: 1539 nucleotides
Theoretical weight: 498.73 KDa
Rfam: Bacterial small subunit ribosomal RNA
Name:
23s-5s joint ribosomal RNA
Representative chains: 4
Length: 3031 nucleotides
Theoretical weight: 982.73 KDa
Rfam:
Bacterial large subunit ribosomal RNA
5S ribosomal RNA
Representative chains: 4
Length: 3031 nucleotides
Theoretical weight: 982.73 KDa
Rfam: