PDB 6yp9 biological assemblies and structure analysis ‹ Protein Data Bank in Europe (PDBe)

6yp9 › Structure analysis

Rabbit muscle actin in complex with ADF-H and ATP-ATTO-488

X-ray diffraction

2.564Å resolution

Source organisms:

Assembly composition:

hetero dimer (preferred)

Entry contents: 2 distinct polypeptide molecules

Assembly 1 (preferred)

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Assembly Name: Twinfilin-1 and Actin, alpha skeletal muscle

Multimeric state: hetero dimer

Accessible surface area: 20828.88 Å²

Buried surface area: 3419.03 Å²

Dissociation area: 1,172.84 Å²

Dissociation energy (ΔG^diss): 6.41 kcal/mol

Dissociation entropy (TΔS^diss): 12.4 kcal/mol

Symmetry number: 1

PDBe Complex ID: PDB-CPX-159310

Chain: A
Length: 375 amino acids
Theoretical weight: 41.88 KDa
Source organism: Oryctolagus cuniculus
UniProt:

Canonical: P68135 (Residues: 3-377; Coverage: 100%)

Gene names: ACTA, ACTA1
Pfam: Actin
InterPro:

FASTA Sequence


    >pdb|6yp9|A

DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF

PDBe-KB: UniProt Coverage View: P68135

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	UniProt
	Chains
	Domains
	Secondary structure
	Ligand binding sites
	Interaction interfaces
	Sequence conservation

UniProt

P68135

Chains

Domains

Secondary structure

Ligand binding sites

Interaction interfaces

Sequence conservation

Amino acid probabilities

Data displayed by

Property

Probability

Amino acid properties

Aromatic

Polar

Hydrophobic

Negative charge

Proline

Positive charge

Cysteine

Glycine

Twinfilin-1

Chain: B
Length: 140 amino acids
Theoretical weight: 16.44 KDa
Source organism: Mus musculus
Expression system: Escherichia coli BL21(DE3)
UniProt: