› › Structure analysis

Cryo-EM structure of Coxsackievirus B1 mature virion

Electron Microscopy
3.2Å resolution
PDB entry 7dpf coloured by chain, front view.
PDB entry 7dpf coloured by chain, side view.
PDB entry 7dpf coloured by chain, top view.
Source organism: Coxsackievirus B1
Assembly composition:
hetero 240-mer (preferred)
Entry contents: 4 distinct polypeptide molecules

Quick links

Assemblies

Assembly 1 (preferred)
Download    3D Visualisation
Multimeric state: hetero 240-mer
PDBe Complex ID: PDB-CPX-104454

Macromolecules

Virion protein 1
Chain: 1
Length: 278 amino acids
Theoretical weight: 31.21 KDa
Source organism: Coxsackievirus B1
UniProt:
  • Canonical: A0A7T7KAA0 (Residues: 571-848; Coverage: 33%)
Pfam: picornavirus capsid protein
InterPro:
Virion protein 1 in PDB entry 7dpf, assembly 1, front view.
Virion protein 1 in PDB entry 7dpf, assembly 1, side view.
Virion protein 1 in PDB entry 7dpf, assembly 1, top view.
Molecule details ›

Search similar proteins

VP2
Chain: 2
Length: 263 amino acids
Theoretical weight: 29.12 KDa
Source organism: Coxsackievirus B1
UniProt:
  • Canonical: A0A2S0RQC2 (Residues: 70-332; Coverage: 12%)
Pfam: picornavirus capsid protein
InterPro:
VP2 in PDB entry 7dpf, assembly 1, front view.
VP2 in PDB entry 7dpf, assembly 1, side view.
VP2 in PDB entry 7dpf, assembly 1, top view.
Molecule details ›

Search similar proteins

VP3
Chain: 3
Length: 238 amino acids
Theoretical weight: 26.33 KDa
Source organism: Coxsackievirus B1
UniProt:
  • Canonical: A0A7T7KAA0 (Residues: 333-570; Coverage: 28%)
Pfam: picornavirus capsid protein
InterPro:
VP3 in PDB entry 7dpf, assembly 1, front view.
VP3 in PDB entry 7dpf, assembly 1, side view.
VP3 in PDB entry 7dpf, assembly 1, top view.
Molecule details ›

Search similar proteins

VP4
Chain: 4
Length: 69 amino acids
Theoretical weight: 7.48 KDa
Source organism: Coxsackievirus B1
UniProt:
  • Canonical: A0A7T7KB31 (Residues: 1-69; Coverage: 100%)
Pfam: Picornavirus coat protein (VP4)
InterPro:
VP4 in PDB entry 7dpf, assembly 1, front view.
VP4 in PDB entry 7dpf, assembly 1, side view.
VP4 in PDB entry 7dpf, assembly 1, top view.
Molecule details ›

Search similar proteins

Quick links