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GUANOSINE-5'-TRIPHOSPHATE

GTP model coordinates provided in the wwPDB chemical component dictionary
GUANOSINE-5'-TRIPHOSPHATE in PDB entry 7dvq, assembly 1, side view.
GUANOSINE-5'-TRIPHOSPHATE in PDB entry 7dvq, assembly 1, top view.
Formula: C10 H16 N5 O14 P3
Molecular weight: 523 Da
One-letter code: G

Environment details NEW

GTP 1500 bound to chain C
Ligands and residuesInteractions
 hydrophobic
negatively charged
aromatic
polar
cystein
water
positively charged
other
glycine
bound molecule
glycans (SNFG)
aromatic
clashes
covalent
electrostatic
metal hydrophobic
vdw
HIS139GLY141LYS142THR143CYS144GLY180GLY207LYS259ASP261SER311SER312GLN313MG1501HOH1601HOH1602HOH1603

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The above 2D and 3D (Mol*) views of ligand interactions use quaternary structure derived from the PDB entry.
Please note:
  • Some chain IDs in the tooltip are followed by a number in square brackets. This number corresponds to the operation ID (mmCIF ‘oper_expression’) used to transform the chain.
  • The structure seen in Mol* (3D view) was protonated using ChimeraX.
  • Interactions were calculated using Arpeggio (see details for interaction types).
  • The colour scheme used is consistent with Clustal X.

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