Structure analysis

SDCBP PanDDA analysis group deposition -- The PDZ domans of SDCBP in complex with Z254580486

X-ray diffraction
2.4Å resolution
Source organism: Homo sapiens
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

Assemblies

Assembly 1
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Multimeric state: monomeric
Accessible surface area: 10466.09 Å2
Buried surface area: 214.71 Å2
Dissociation area: 107.36 Å2
Dissociation energy (ΔGdiss): -2.3 kcal/mol
Dissociation entropy (TΔSdiss): -0.29 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-126342
Assembly 2
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Multimeric state: monomeric
Accessible surface area: 10066.77 Å2
Buried surface area: 452.69 Å2
Dissociation area: 107.27 Å2
Dissociation energy (ΔGdiss): -3.07 kcal/mol
Dissociation entropy (TΔSdiss): -0.29 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-126342
Assembly 3
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Multimeric state: monomeric
Accessible surface area: 10194.16 Å2
Buried surface area: 630.75 Å2
Dissociation area: 107.28 Å2
Dissociation energy (ΔGdiss): -2.47 kcal/mol
Dissociation entropy (TΔSdiss): -0.28 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-126342
Assembly 4 (preferred)
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Multimeric state: monomeric
Accessible surface area: 10182.08 Å2
Buried surface area: 808.3 Å2
Dissociation area: 109.97 Å2
Dissociation energy (ΔGdiss): -3.07 kcal/mol
Dissociation entropy (TΔSdiss): -0.3 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-126342

Macromolecules

Chains: A, B, C, D
Length: 195 amino acids
Theoretical weight: 21.43 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: O00560 (Residues: 106-298; Coverage: 65%)
Gene names: MDA9, SDCBP, SYCL
Pfam: PDZ domain
InterPro:

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