7p6z

Electron Microscopy
3.5Å resolution

Mycoplasma pneumoniae 70S ribosome in untreated cells

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero 55-mer (preferred)
PDBe Complex ID:
PDB-CPX-154308 (preferred)
Entry contents:
50 distinct polypeptide molecules
5 distinct RNA molecules
Macromolecules (55 distinct):
Large ribosomal subunit protein uL29 Chain: w
Molecule details ›
Chain: w
Length: 111 amino acids
Theoretical weight: 13 KDa
Source organism: Mycoplasmoides pneumoniae M129
UniProt:
  • Canonical: Q50310 (Residues: 1-111; Coverage: 100%)
Gene names: MP658, MPN_173, rpmC
Sequence domains: Ribosomal L29 protein
Large ribosomal subunit protein uL2 Chain: a
Molecule details ›
Chain: a
Length: 287 amino acids
Theoretical weight: 31.97 KDa
Source organism: Mycoplasmoides pneumoniae M129
UniProt:
  • Canonical: P75577 (Residues: 1-287; Coverage: 100%)
Gene names: MP663, MPN_168, rplB
Sequence domains:
Large ribosomal subunit protein uL4 Chain: c
Large ribosomal subunit protein uL6 Chain: e
Large ribosomal subunit protein uL15 Chain: k
Large ribosomal subunit protein uL13 Chain: i
Large ribosomal subunit protein bL17 Chain: m
Large ribosomal subunit protein bL21 Chain: q
Large ribosomal subunit protein bL27 Chain: u
Large ribosomal subunit protein bL32 Chain: y
Large ribosomal subunit protein bL34 Chain: 0
Large ribosomal subunit protein bL36 Chain: 2
Large ribosomal subunit protein bL35 Chain: 1
Large ribosomal subunit protein bL19 Chain: o
Large ribosomal subunit protein uL23 Chain: s
Large ribosomal subunit protein bL28 Chain: v
Large ribosomal subunit protein bL31 Chain: x
Large ribosomal subunit protein bL33A Chain: z
Large ribosomal subunit protein uL5 Chain: d
Large ribosomal subunit protein uL3 Chain: b
Large ribosomal subunit protein uL16 Chain: l
Large ribosomal subunit protein bL20 Chain: p
Large ribosomal subunit protein uL14 Chain: j
Large ribosomal subunit protein uL18 Chain: n
Large ribosomal subunit protein uL24 Chain: t
Large ribosomal subunit protein uL22 Chain: r
Small ribosomal subunit protein uS3 Chain: B
Small ribosomal subunit protein uS5 Chain: D
Small ribosomal subunit protein uS7 Chain: F
Small ribosomal subunit protein uS2 Chain: A
Small ribosomal subunit protein uS9 Chain: H
Small ribosomal subunit protein uS11 Chain: J
Small ribosomal subunit protein uS4 Chain: C
Small ribosomal subunit protein bS20 Chain: S
Small ribosomal subunit protein bS16 Chain: O
Small ribosomal subunit protein uS12 Chain: K
Small ribosomal subunit protein uS14 Chain: M
Small ribosomal subunit protein uS10 Chain: I
Small ribosomal subunit protein uS13 Chain: L
Small ribosomal subunit protein uS15 Chain: N
Small ribosomal subunit protein uS19 Chain: R
Small ribosomal subunit protein bS21 Chain: T
Small ribosomal subunit protein uS8 Chain: G
Small ribosomal subunit protein bS18 Chain: Q
Small ribosomal subunit protein bS6 Chain: E
Small ribosomal subunit protein uS17 Chain: P
nascent peptide Chain: Z
Large ribosomal subunit protein bL9 Chain: f
Large ribosomal subunit protein uL11 Chain: h
Large ribosomal subunit protein uL10 Chain: g
23S ribosomal RNA Chain: 3
5S ribosomal RNA Chain: 4
16S ribosomal RNA Chain: 5
tRNA-Phe Chain: 7
Messenger RNA Chain: Y

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.5Å
Relevant EMDB volumes: EMD-13234