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Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)

Electron Microscopy
3.1Å resolution
PDB entry 7pjv coloured by chain, front view.
PDB entry 7pjv coloured by chain, side view.
PDB entry 7pjv coloured by chain, top view.
Source organism: Escherichia coli K-12
Assembly composition:
hetero 59-mer (preferred)
Entry contents: 53 distinct polypeptide molecules
6 distinct RNA molecules

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Assemblies

Assembly 1 (preferred)
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Multimeric state: hetero 59-mer
Accessible surface area: 770266.8 Å2
Buried surface area: 338052.82 Å2
Dissociation area: 952.75 Å2
Dissociation energy (ΔGdiss): -1.29 kcal/mol
Dissociation entropy (TΔSdiss): 13.44 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-135494

Macromolecules

Large ribosomal subunit protein bL32
Chain: 0
Length: 57 amino acids
Theoretical weight: 6.46 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7N4 (Residues: 1-57; Coverage: 100%)
Pfam: Ribosomal L32p protein family
InterPro:
Large ribosomal subunit protein bL32 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL32 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL32 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein bL33
Chain: 1
Length: 55 amino acids
Theoretical weight: 6.39 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7N9 (Residues: 1-55; Coverage: 100%)
Pfam: Ribosomal protein L33
InterPro:
Large ribosomal subunit protein bL33 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL33 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL33 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein bL34
Chain: 2
Length: 46 amino acids
Theoretical weight: 5.4 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7P5 (Residues: 1-46; Coverage: 100%)
Pfam: Ribosomal protein L34
InterPro:
Large ribosomal subunit protein bL34 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL34 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL34 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein bL35
Chain: 3
Length: 65 amino acids
Theoretical weight: 7.31 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7Q1 (Residues: 1-65; Coverage: 100%)
Pfam: Ribosomal protein L35
InterPro:
Large ribosomal subunit protein bL35 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL35 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL35 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein bL36A
Chain: 4
Length: 38 amino acids
Theoretical weight: 4.38 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7Q6 (Residues: 1-38; Coverage: 100%)
Pfam: Ribosomal protein L36
InterPro:
Large ribosomal subunit protein bL36A in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL36A in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL36A in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL10
Chain: 5
Length: 165 amino acids
Theoretical weight: 17.74 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7J3 (Residues: 1-165; Coverage: 100%)
Pfam: Ribosomal protein L10
InterPro:
Large ribosomal subunit protein uL10 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL10 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL10 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein bL31
Chain: 6
Length: 70 amino acids
Theoretical weight: 7.89 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7M9 (Residues: 1-70; Coverage: 100%)
Pfam: Ribosomal protein L31
InterPro:
Large ribosomal subunit protein bL31 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL31 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL31 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL2
Chain: C
Length: 273 amino acids
Theoretical weight: 29.92 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P60422 (Residues: 1-273; Coverage: 100%)
Pfam:
InterPro:
Large ribosomal subunit protein uL2 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL2 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL2 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL3
Chain: D
Length: 209 amino acids
Theoretical weight: 22.28 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P60438 (Residues: 1-209; Coverage: 100%)
Pfam: Ribosomal protein L3
InterPro:
Large ribosomal subunit protein uL3 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL3 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL3 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL4
Chain: E
Length: 201 amino acids
Theoretical weight: 22.12 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P60723 (Residues: 1-201; Coverage: 100%)
Pfam: Ribosomal protein L4/L1 family
InterPro:
Large ribosomal subunit protein uL4 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL4 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL4 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL5
Chain: F
Length: 179 amino acids
Theoretical weight: 20.33 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P62399 (Residues: 1-179; Coverage: 100%)
Pfam:
InterPro:
Large ribosomal subunit protein uL5 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL5 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL5 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL6
Chain: G
Length: 177 amino acids
Theoretical weight: 18.93 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0AG55 (Residues: 1-177; Coverage: 100%)
Pfam: Ribosomal protein L6
InterPro:
Large ribosomal subunit protein uL6 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL6 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL6 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein bL9
Chain: H
Length: 149 amino acids
Theoretical weight: 15.79 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7R1 (Residues: 1-149; Coverage: 100%)
Pfam:
InterPro:
Large ribosomal subunit protein bL9 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL9 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL9 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL11
Chain: I
Length: 142 amino acids
Theoretical weight: 14.89 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7J7 (Residues: 1-142; Coverage: 100%)
Pfam:
InterPro:
Large ribosomal subunit protein uL11 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL11 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL11 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL13
Chain: J
Length: 142 amino acids
Theoretical weight: 16.05 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0AA10 (Residues: 1-142; Coverage: 100%)
Pfam: Ribosomal protein L13
InterPro:
Large ribosomal subunit protein uL13 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL13 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL13 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL14
Chain: K
Length: 123 amino acids
Theoretical weight: 13.57 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0ADY3 (Residues: 1-123; Coverage: 100%)
Pfam: Ribosomal protein L14p/L23e
InterPro:
Large ribosomal subunit protein uL14 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL14 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL14 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL15
Chain: L
Length: 144 amino acids
Theoretical weight: 15.01 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P02413 (Residues: 1-144; Coverage: 100%)
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
InterPro:
Large ribosomal subunit protein uL15 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL15 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL15 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL16
Chain: M
Length: 136 amino acids
Theoretical weight: 15.31 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0ADY7 (Residues: 1-136; Coverage: 100%)
Pfam: Ribosomal protein L16p/L10e
InterPro:
Large ribosomal subunit protein uL16 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL16 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL16 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein bL17
Chain: N
Length: 127 amino acids
Theoretical weight: 14.39 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0AG44 (Residues: 1-127; Coverage: 100%)
Pfam: Ribosomal protein L17
InterPro:
Large ribosomal subunit protein bL17 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL17 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL17 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL18
Chain: O
Length: 117 amino acids
Theoretical weight: 12.79 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0C018 (Residues: 1-117; Coverage: 100%)
Pfam: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
InterPro:
Large ribosomal subunit protein uL18 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL18 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL18 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein bL19
Chain: P
Length: 115 amino acids
Theoretical weight: 13.16 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7K6 (Residues: 1-115; Coverage: 100%)
Pfam: Ribosomal protein L19
InterPro:
Large ribosomal subunit protein bL19 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL19 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL19 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein bL20
Chain: Q
Length: 118 amino acids
Theoretical weight: 13.53 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7L3 (Residues: 1-118; Coverage: 100%)
Pfam: Ribosomal protein L20
InterPro:
Large ribosomal subunit protein bL20 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL20 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL20 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein bL21
Chain: R
Length: 103 amino acids
Theoretical weight: 11.59 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0AG48 (Residues: 1-103; Coverage: 100%)
Pfam: Ribosomal prokaryotic L21 protein
InterPro:
Large ribosomal subunit protein bL21 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL21 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL21 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL22
Chain: S
Length: 110 amino acids
Theoretical weight: 12.25 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P61175 (Residues: 1-110; Coverage: 100%)
Pfam: Ribosomal protein L22p/L17e
InterPro:
Large ribosomal subunit protein uL22 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL22 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL22 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL23
Chain: T
Length: 100 amino acids
Theoretical weight: 11.22 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0ADZ0 (Residues: 1-100; Coverage: 100%)
Pfam: Ribosomal protein L23
InterPro:
Large ribosomal subunit protein uL23 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL23 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL23 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL24
Chain: U
Length: 104 amino acids
Theoretical weight: 11.34 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P60624 (Residues: 1-104; Coverage: 100%)
Pfam:
InterPro:
Large ribosomal subunit protein uL24 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL24 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL24 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein bL25
Chain: V
Length: 94 amino acids
Theoretical weight: 10.71 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P68919 (Residues: 1-94; Coverage: 100%)
Pfam: Ribosomal L25p family
InterPro:
Large ribosomal subunit protein bL25 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL25 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL25 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein bL27
Chain: W
Length: 85 amino acids
Theoretical weight: 9.15 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7L8 (Residues: 1-85; Coverage: 100%)
Pfam: Ribosomal L27 protein
InterPro:
Large ribosomal subunit protein bL27 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL27 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL27 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein bL28
Chain: X
Length: 78 amino acids
Theoretical weight: 9.03 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7M2 (Residues: 1-78; Coverage: 100%)
Pfam: Ribosomal L28 family
InterPro:
Large ribosomal subunit protein bL28 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein bL28 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein bL28 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL29
Chain: Y
Length: 63 amino acids
Theoretical weight: 7.29 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7M6 (Residues: 1-63; Coverage: 100%)
Pfam: Ribosomal L29 protein
InterPro:
Large ribosomal subunit protein uL29 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL29 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL29 in PDB entry 7pjv, assembly 1, top view.
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Large ribosomal subunit protein uL30
Chain: Z
Length: 59 amino acids
Theoretical weight: 6.55 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0AG51 (Residues: 1-59; Coverage: 100%)
Pfam: Ribosomal protein L30p/L7e
InterPro:
Large ribosomal subunit protein uL30 in PDB entry 7pjv, assembly 1, front view.
Large ribosomal subunit protein uL30 in PDB entry 7pjv, assembly 1, side view.
Large ribosomal subunit protein uL30 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS2
Chain: b
Length: 240 amino acids
Theoretical weight: 26.65 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7V0 (Residues: 1-240; Coverage: 100%)
Pfam: Ribosomal protein S2
InterPro:
Small ribosomal subunit protein uS2 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS2 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS2 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS3
Chain: c
Length: 233 amino acids
Theoretical weight: 26.03 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7V3 (Residues: 1-233; Coverage: 100%)
Pfam:
InterPro:
Small ribosomal subunit protein uS3 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS3 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS3 in PDB entry 7pjv, assembly 1, top view.
Molecule details ›

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Small ribosomal subunit protein uS4
Chain: d
Length: 206 amino acids
Theoretical weight: 23.51 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7V8 (Residues: 1-206; Coverage: 100%)
Pfam:
InterPro:
Small ribosomal subunit protein uS4 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS4 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS4 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS5
Chain: e
Length: 167 amino acids
Theoretical weight: 17.63 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7W1 (Residues: 1-167; Coverage: 100%)
Pfam:
InterPro:
Small ribosomal subunit protein uS5 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS5 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS5 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein bS6
Chain: f
Length: 135 amino acids
Theoretical weight: 15.73 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P02358 (Residues: 1-135; Coverage: 100%)
Pfam: Ribosomal protein S6
InterPro:
Small ribosomal subunit protein bS6 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein bS6 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein bS6 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS7
Chain: g
Length: 179 amino acids
Theoretical weight: 20.06 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P02359 (Residues: 1-179; Coverage: 100%)
Pfam: Ribosomal protein S7p/S5e
InterPro:
Small ribosomal subunit protein uS7 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS7 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS7 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS8
Chain: h
Length: 130 amino acids
Theoretical weight: 14.15 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7W7 (Residues: 1-130; Coverage: 100%)
Pfam: Ribosomal protein S8
InterPro:
Small ribosomal subunit protein uS8 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS8 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS8 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS9
Chain: i
Length: 130 amino acids
Theoretical weight: 14.89 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7X3 (Residues: 1-130; Coverage: 100%)
Pfam: Ribosomal protein S9/S16
InterPro:
Small ribosomal subunit protein uS9 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS9 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS9 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS10
Chain: j
Length: 103 amino acids
Theoretical weight: 11.76 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7R5 (Residues: 1-103; Coverage: 100%)
Pfam: Ribosomal protein S10p/S20e
InterPro:
Small ribosomal subunit protein uS10 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS10 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS10 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS11
Chain: k
Length: 129 amino acids
Theoretical weight: 13.87 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7R9 (Residues: 1-129; Coverage: 100%)
Pfam: Ribosomal protein S11
InterPro:
Small ribosomal subunit protein uS11 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS11 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS11 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS12
Chain: l
Length: 124 amino acids
Theoretical weight: 13.77 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7S3 (Residues: 1-124; Coverage: 100%)
Pfam: Ribosomal protein S12/S23
InterPro:
Small ribosomal subunit protein uS12 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS12 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS12 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS13
Chain: m
Length: 118 amino acids
Theoretical weight: 13.13 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7S9 (Residues: 1-118; Coverage: 100%)
Pfam: Ribosomal protein S13/S18
InterPro:
Small ribosomal subunit protein uS13 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS13 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS13 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS14
Chain: n
Length: 102 amino acids
Theoretical weight: 11.68 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0AG59 (Residues: 1-35, 36-101; Coverage: 100%)
Pfam: Ribosomal protein S14p/S29e
InterPro:
Small ribosomal subunit protein uS14 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS14 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS14 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS15
Chain: o
Length: 89 amino acids
Theoretical weight: 10.29 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0ADZ4 (Residues: 1-89; Coverage: 100%)
Pfam: Ribosomal protein S15
InterPro:
Small ribosomal subunit protein uS15 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS15 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS15 in PDB entry 7pjv, assembly 1, top view.
Molecule details ›

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Small ribosomal subunit protein bS16
Chain: p
Length: 82 amino acids
Theoretical weight: 9.21 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7T3 (Residues: 1-82; Coverage: 100%)
Pfam: Ribosomal protein S16
InterPro:
Small ribosomal subunit protein bS16 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein bS16 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein bS16 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS17
Chain: q
Length: 84 amino acids
Theoretical weight: 9.72 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0AG63 (Residues: 1-84; Coverage: 100%)
Pfam: Ribosomal protein S17
InterPro:
Small ribosomal subunit protein uS17 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS17 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS17 in PDB entry 7pjv, assembly 1, top view.
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30S ribosomal protein S18
Chain: r
Length: 75 amino acids
Theoretical weight: 9.01 KDa
Source organism: Escherichia coli K-12
InterPro:
30S ribosomal protein S18 in PDB entry 7pjv, assembly 1, front view.
30S ribosomal protein S18 in PDB entry 7pjv, assembly 1, side view.
30S ribosomal protein S18 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein uS19
Chain: s
Length: 92 amino acids
Theoretical weight: 10.46 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7U3 (Residues: 1-92; Coverage: 100%)
Pfam: Ribosomal protein S19
InterPro:
Small ribosomal subunit protein uS19 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein uS19 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein uS19 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein bS20
Chain: t
Length: 87 amino acids
Theoretical weight: 9.71 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A7U7 (Residues: 1-87; Coverage: 100%)
Pfam: Ribosomal protein S20
InterPro:
Small ribosomal subunit protein bS20 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein bS20 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein bS20 in PDB entry 7pjv, assembly 1, top view.
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Small ribosomal subunit protein bS21
Chain: u
Length: 71 amino acids
Theoretical weight: 8.52 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P68679 (Residues: 1-71; Coverage: 100%)
Pfam: Ribosomal protein S21
InterPro:
Small ribosomal subunit protein bS21 in PDB entry 7pjv, assembly 1, front view.
Small ribosomal subunit protein bS21 in PDB entry 7pjv, assembly 1, side view.
Small ribosomal subunit protein bS21 in PDB entry 7pjv, assembly 1, top view.
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Elongation factor G
Chain: x
Length: 704 amino acids
Theoretical weight: 77.68 KDa
Source organism: Escherichia coli K-12
UniProt:
  • Canonical: P0A6M8 (Residues: 1-704; Coverage: 100%)
Pfam:
InterPro:
Elongation factor G in PDB entry 7pjv, assembly 1, front view.
Elongation factor G in PDB entry 7pjv, assembly 1, side view.
Elongation factor G in PDB entry 7pjv, assembly 1, top view.
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Dipeptide (FME-PHE)
Chain: y
Length: 2 amino acids
Theoretical weight: 324 Da
Source organism: Escherichia coli K-12
Dipeptide (FME-PHE) in PDB entry 7pjv, assembly 1, front view.
Dipeptide (FME-PHE) in PDB entry 7pjv, assembly 1, side view.
Dipeptide (FME-PHE) in PDB entry 7pjv, assembly 1, top view.
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RNA chain A
Name: 23S ribosomal RNA
Representative chains: A
Source organism: Escherichia coli K-12 [83333]
Length: 2903 nucleotides
Theoretical weight: 941.54 KDa
Rfam: Bacterial large subunit ribosomal RNA
23S ribosomal RNA in PDB entry 7pjv, assembly 1, front view.
23S ribosomal RNA in PDB entry 7pjv, assembly 1, side view.
23S ribosomal RNA in PDB entry 7pjv, assembly 1, top view.
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RNA chain B
Name: 5S ribosomal RNA
Representative chains: B
Source organism: Escherichia coli K-12 [83333]
Length: 120 nucleotides
Theoretical weight: 38.79 KDa
Rfam: 5S ribosomal RNA
5S ribosomal RNA in PDB entry 7pjv, assembly 1, front view.
5S ribosomal RNA in PDB entry 7pjv, assembly 1, side view.
5S ribosomal RNA in PDB entry 7pjv, assembly 1, top view.
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RNA chain a
Name: 16S ribosomal RNA
Representative chains: a
Source organism: Escherichia coli K-12 [83333]
Length: 1542 nucleotides
Theoretical weight: 499.87 KDa
Rfam: Bacterial small subunit ribosomal RNA
16S ribosomal RNA in PDB entry 7pjv, assembly 1, front view.
16S ribosomal RNA in PDB entry 7pjv, assembly 1, side view.
16S ribosomal RNA in PDB entry 7pjv, assembly 1, top view.
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RNA chain v
Name: P-site tRNA(fMet)
Representative chains: v
Source organism: Escherichia coli K-12 [83333]
Length: 77 nucleotides
Theoretical weight: 24.82 KDa
Rfam: tRNA
P-site tRNA(fMet) in PDB entry 7pjv, assembly 1, front view.
P-site tRNA(fMet) in PDB entry 7pjv, assembly 1, side view.
P-site tRNA(fMet) in PDB entry 7pjv, assembly 1, top view.
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RNA chain w
Name: P-site fMet-Phe-tRNA(Phe)
Representative chains: w
Source organism: Escherichia coli K-12 [83333]
Length: 76 nucleotides
Theoretical weight: 24.64 KDa
Rfam: tRNA
P-site fMet-Phe-tRNA(Phe) in PDB entry 7pjv, assembly 1, front view.
P-site fMet-Phe-tRNA(Phe) in PDB entry 7pjv, assembly 1, side view.
P-site fMet-Phe-tRNA(Phe) in PDB entry 7pjv, assembly 1, top view.
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RNA chain z
Name: Messenger RNA
Representative chains: z
Source organism: Escherichia coli K-12 [83333]
Length: 33 nucleotides
Theoretical weight: 10.48 KDa
Messenger RNA in PDB entry 7pjv, assembly 1, front view.
Messenger RNA in PDB entry 7pjv, assembly 1, side view.
Messenger RNA in PDB entry 7pjv, assembly 1, top view.
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