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7pnv › MA6

6N-DIMETHYLADENOSINE-5'-MONOPHOSHATE

Modified residue MA6 in PDB entry 7pnv, assembly 1, front view.

Modified residue MA6 in PDB entry 7pnv, assembly 1, side view.

Modified residue MA6 in PDB entry 7pnv, assembly 1, top view.

Formula: C₁₂ H₁₈ N₅ O₇ P

Molecular weight: 375 Da

One-letter code: A

Charge: 0

IUPAC InChI: InChI=1S/C12H18N5O7P/c1-16(2)10-7-11(14-4-13-10)17(5-15-7)12-9(19)8(18)6(24-12)3-23-25(20,21)22/h4-6,8-9,12,18-19H,3H2,1-2H3,(H2,20,21,22)/t6-,8-,9-,12-/m1/s1

IUPAC InChI key: OWRDTHWSVNWFAZ-WOUKDFQISA-N

Molecule 1

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	Chains
	Rfam
	Ligand binding sites
	Interaction interfaces

Chains

Chain A (auth A)

Chain A

Rfam

Residues mapped to Rfam domains

Ligand binding sites

Residues binding POTASSIUM ION <img src="https://www.ebi.ac.uk/pdbe/static/files/pdbechem_v2/K_200.svg" />

Residues binding MAGNESIUM ION <img src="https://www.ebi.ac.uk/pdbe/static/files/pdbechem_v2/MG_200.svg" />

Interaction interfaces

Residues interacting with Small ribosomal subunit protein uS5m (Q99N87)

Residues interacting with Small ribosomal subunit protein mS40 (Q99N84)

Residues interacting with Small ribosomal subunit protein uS12m (O35680)

Residues interacting with Small ribosomal subunit protein mS25 (Q9D125)

Residues interacting with Small ribosomal subunit protein bS16m (Q9CPX7)

Residues interacting with Small ribosomal subunit protein mS26 (Q80ZS3)

Residues interacting with Small ribosomal subunit protein mS34 (Q9JIK9)

Residues interacting with Small ribosomal subunit protein uS17m (Q9CQE3)

Residues interacting with Small ribosomal subunit protein uS15m (Q9DC71)

Residues interacting with Small ribosomal subunit protein mS38 (Q9DCJ7)

Residues interacting with Putative ribosome-binding factor A, mitochondrial (Q6P3B9)

Residues interacting with Small ribosomal subunit protein bS6m (P58064)

Residues interacting with Small ribosomal subunit protein bS18m (Q8R2L5)

Residues interacting with Small ribosomal subunit protein bS21m (P58059)

Residues interacting with Small ribosomal subunit protein uS11m (Q9DCA2)

Residues interacting with 12S rRNA N(4)-cytidine methyltransferase METTL15 (Q9DCL4)

Residues interacting with Small ribosomal subunit protein mS23 (Q8VE22)

Residues interacting with Small ribosomal subunit protein uS2m (Q924T2)

Residues interacting with Small ribosomal subunit protein uS7m (Q80X85)

Residues interacting with Small ribosomal subunit protein uS10m (Q80ZK0)

Residues interacting with Small ribosomal subunit protein uS9m (Q9D7N3)

Residues interacting with Small ribosomal subunit protein uS14m (Q9CR88)

Residues interacting with Small ribosomal subunit protein mS33 (Q9D2R8)

Residues interacting with Small ribosomal subunit protein mS39 (Q14C51)

Residues interacting with Small ribosomal subunit protein uS3m (Q9CQV5)

Residues interacting with Small ribosomal subunit protein mS35 (Q8BJZ4)

Residues interacting with Small ribosomal subunit protein mS29 (Q9ER88)

Residues interacting with Small ribosomal subunit protein mS27 (Q8BK72)

Sequence conservation

Amino acid probabilities The amino acid probabilities are calculated using HMM profiles based on multiple sequence alignments. Click to see more details...

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Amino acid properties

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Hydrophobic

Negative charge

Proline

Positive charge

Cysteine

Glycine

Variants

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7pnv:

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PDB › 7pnv › MA6

6N-DIMETHYLADENOSINE-5'-MONOPHOSHATE

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7pnv › MA6