Assemblies
Assembly Name:
ribosomal protein and RNA
Multimeric state:
hetero 52-mer
Accessible surface area:
720699.22 Å2
Buried surface area:
164790.08 Å2
Dissociation area:
910.55
Å2
Dissociation energy (ΔGdiss):
5.95
kcal/mol
Dissociation entropy (TΔSdiss):
10.95
kcal/mol
Symmetry number:
1
PDBe Complex ID:
PDB-CPX-281407
Macromolecules
Chain: C
Length: 277 amino acids
Theoretical weight: 30.34 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam:
InterPro:
Length: 277 amino acids
Theoretical weight: 30.34 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P42919 (Residues: 1-277; Coverage: 100%)
Pfam:
InterPro:
- Large ribosomal subunit protein uL2, bacterial/organellar-type
- Nucleic acid-binding, OB-fold
- Large ribosomal subunit protein uL2
- Large ribosomal subunit protein uL2, RNA-binding domain
- Large ribosomal subunit protein uL2, domain 2
- Large ribosomal subunit protein uL2, C-terminal
- Translation protein SH3-like domain superfamily
- Large ribosomal subunit protein uL2, domain 3
- Large ribosomal subunit protein uL2, conserved site
Chain: D
Length: 208 amino acids
Theoretical weight: 22.59 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L3
InterPro:
Length: 208 amino acids
Theoretical weight: 22.59 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P42920 (Residues: 1-208; Coverage: 100%)
Pfam: Ribosomal protein L3
InterPro:
Chain: E
Length: 207 amino acids
Theoretical weight: 22.42 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L4/L1 family
InterPro:
Length: 207 amino acids
Theoretical weight: 22.42 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P42921 (Residues: 1-207; Coverage: 100%)
Pfam: Ribosomal protein L4/L1 family
InterPro:
Chain: F
Length: 179 amino acids
Theoretical weight: 20.18 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam:
InterPro:
Length: 179 amino acids
Theoretical weight: 20.18 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P12877 (Residues: 1-179; Coverage: 100%)
Pfam:
InterPro:
Chain: G
Length: 179 amino acids
Theoretical weight: 19.54 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L6
InterPro:
Length: 179 amino acids
Theoretical weight: 19.54 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P46898 (Residues: 1-179; Coverage: 100%)
Pfam: Ribosomal protein L6
InterPro:
Chain: H
Length: 166 amino acids
Theoretical weight: 18.13 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L10
InterPro:
Length: 166 amino acids
Theoretical weight: 18.13 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P42923 (Residues: 1-166; Coverage: 100%)
Pfam: Ribosomal protein L10
InterPro:
Chain: I
Length: 141 amino acids
Theoretical weight: 14.95 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam:
InterPro:
Length: 141 amino acids
Theoretical weight: 14.95 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: Q06796 (Residues: 1-141; Coverage: 100%)
Pfam:
InterPro:
- Large ribosomal subunit protein uL11, N-terminal domain superfamily
- Ribosomal protein uL11
- Large ribosomal subunit protein uL11, bacterial-type
- Large ribosomal subunit protein uL11, N-terminal
- Large ribosomal subunit protein uL11, C-terminal domain superfamily
- Large ribosomal subunit protein uL11, C-terminal
- Large ribosomal subunit protein uL11, conserved site
Chain: J
Length: 145 amino acids
Theoretical weight: 16.41 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L13
InterPro:
Length: 145 amino acids
Theoretical weight: 16.41 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P70974 (Residues: 1-145; Coverage: 100%)
Pfam: Ribosomal protein L13
InterPro:
Chain: K
Length: 122 amino acids
Theoretical weight: 13.18 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L14p/L23e
InterPro:
Length: 122 amino acids
Theoretical weight: 13.18 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P12875 (Residues: 1-122; Coverage: 100%)
Pfam: Ribosomal protein L14p/L23e
InterPro:
Chain: L
Length: 146 amino acids
Theoretical weight: 15.41 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
InterPro:
Length: 146 amino acids
Theoretical weight: 15.41 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P19946 (Residues: 1-146; Coverage: 100%)
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
InterPro:
Chain: M
Length: 144 amino acids
Theoretical weight: 16.22 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L16p/L10e
InterPro:
Length: 144 amino acids
Theoretical weight: 16.22 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P14577 (Residues: 1-144; Coverage: 100%)
Pfam: Ribosomal protein L16p/L10e
InterPro:
Chain: N
Length: 120 amino acids
Theoretical weight: 13.77 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L17
InterPro:
Length: 120 amino acids
Theoretical weight: 13.77 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P20277 (Residues: 1-120; Coverage: 100%)
Pfam: Ribosomal protein L17
InterPro:
Chain: O
Length: 120 amino acids
Theoretical weight: 12.99 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
InterPro:
Length: 120 amino acids
Theoretical weight: 12.99 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P46899 (Residues: 1-120; Coverage: 100%)
Pfam: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
InterPro:
Chain: P
Length: 115 amino acids
Theoretical weight: 13.42 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L19
InterPro:
Length: 115 amino acids
Theoretical weight: 13.42 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: O31742 (Residues: 1-115; Coverage: 100%)
Pfam: Ribosomal protein L19
InterPro:
Chain: Q
Length: 119 amino acids
Theoretical weight: 13.67 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L20
InterPro:
Length: 119 amino acids
Theoretical weight: 13.67 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P55873 (Residues: 1-119; Coverage: 100%)
Pfam: Ribosomal protein L20
InterPro:
Chain: R
Length: 102 amino acids
Theoretical weight: 11.3 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal prokaryotic L21 protein
InterPro:
Length: 102 amino acids
Theoretical weight: 11.3 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P26908 (Residues: 1-102; Coverage: 100%)
Pfam: Ribosomal prokaryotic L21 protein
InterPro:
Chain: S
Length: 113 amino acids
Theoretical weight: 12.48 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L22p/L17e
InterPro:
Length: 113 amino acids
Theoretical weight: 12.48 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P42060 (Residues: 1-113; Coverage: 100%)
Pfam: Ribosomal protein L22p/L17e
InterPro:
Chain: T
Length: 95 amino acids
Theoretical weight: 10.98 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L23
InterPro:
Length: 95 amino acids
Theoretical weight: 10.98 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P42924 (Residues: 1-95; Coverage: 100%)
Pfam: Ribosomal protein L23
InterPro:
Chain: U
Length: 103 amino acids
Theoretical weight: 11.17 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam:
InterPro:
Length: 103 amino acids
Theoretical weight: 11.17 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P0CI78 (Residues: 1-103; Coverage: 100%)
Pfam:
InterPro:
Chain: V
Length: 94 amino acids
Theoretical weight: 10.39 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal L27 protein
InterPro:
Length: 94 amino acids
Theoretical weight: 10.39 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P05657 (Residues: 1-94; Coverage: 100%)
Pfam: Ribosomal L27 protein
InterPro:
Chain: Y
Length: 62 amino acids
Theoretical weight: 6.83 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal L28 family
InterPro:
Length: 62 amino acids
Theoretical weight: 6.83 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P37807 (Residues: 1-62; Coverage: 100%)
Pfam: Ribosomal L28 family
InterPro:
Chain: Z
Length: 66 amino acids
Theoretical weight: 7.73 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal L29 protein
InterPro:
Length: 66 amino acids
Theoretical weight: 7.73 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P12873 (Residues: 1-66; Coverage: 100%)
Pfam: Ribosomal L29 protein
InterPro:
Chain: a
Length: 59 amino acids
Theoretical weight: 6.65 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L30p/L7e
InterPro:
Length: 59 amino acids
Theoretical weight: 6.65 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P19947 (Residues: 1-59; Coverage: 100%)
Pfam: Ribosomal protein L30p/L7e
InterPro:
Chain: b
Length: 59 amino acids
Theoretical weight: 6.75 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal L32p protein family
InterPro:
Length: 59 amino acids
Theoretical weight: 6.75 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: O34687 (Residues: 1-59; Coverage: 100%)
Pfam: Ribosomal L32p protein family
InterPro:
Chain: c
Length: 49 amino acids
Theoretical weight: 5.92 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L33
InterPro:
Length: 49 amino acids
Theoretical weight: 5.92 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P56849 (Residues: 1-49; Coverage: 100%)
Pfam: Ribosomal protein L33
InterPro:
Chain: d
Length: 44 amino acids
Theoretical weight: 5.27 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L34
InterPro:
Length: 44 amino acids
Theoretical weight: 5.27 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P05647 (Residues: 1-44; Coverage: 100%)
Pfam: Ribosomal protein L34
InterPro:
Chain: e
Length: 66 amino acids
Theoretical weight: 7.58 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L35
InterPro:
Length: 66 amino acids
Theoretical weight: 7.58 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P55874 (Residues: 1-66; Coverage: 100%)
Pfam: Ribosomal protein L35
InterPro:
Chain: f
Length: 37 amino acids
Theoretical weight: 4.32 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein L36
InterPro:
Length: 37 amino acids
Theoretical weight: 4.32 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P20278 (Residues: 1-37; Coverage: 100%)
Pfam: Ribosomal protein L36
InterPro:
Chain: X
Length: 246 amino acids
Theoretical weight: 28.01 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S2
InterPro:
Length: 246 amino acids
Theoretical weight: 28.01 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21464 (Residues: 1-246; Coverage: 100%)
Pfam: Ribosomal protein S2
InterPro:
Chain: g
Length: 218 amino acids
Theoretical weight: 24.35 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam:
InterPro:
Length: 218 amino acids
Theoretical weight: 24.35 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21465 (Residues: 1-218; Coverage: 100%)
Pfam:
InterPro:
- Small ribosomal subunit protein uS3, bacterial-type
- K homology domain superfamily, prokaryotic type
- K homology domain-like, alpha/beta
- K Homology domain, type 2
- K Homology domain
- Ribosomal protein S3, C-terminal domain superfamily
- Small ribosomal subunit protein uS3, C-terminal
- Small ribosomal subunit protein uS3, conserved site
Chain: h
Length: 200 amino acids
Theoretical weight: 22.87 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam:
InterPro:
Length: 200 amino acids
Theoretical weight: 22.87 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21466 (Residues: 1-200; Coverage: 100%)
Pfam:
InterPro:
Chain: i
Length: 166 amino acids
Theoretical weight: 17.65 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam:
InterPro:
Length: 166 amino acids
Theoretical weight: 17.65 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21467 (Residues: 1-166; Coverage: 100%)
Pfam:
InterPro:
- Small ribosomal subunit protein uS5, bacterial-type
- Small ribosomal subunit protein uS5
- Small ribosomal subunit protein uS5, N-terminal
- Small ribosomal subunit protein uS5, N-terminal, conserved site
- Small ribosomal subunit protein uS5 domain 2-type fold, subgroup
- Ribosomal protein uS5 domain 2-type superfamily
- Small ribosomal subunit protein uS5, C-terminal
Chain: j
Length: 95 amino acids
Theoretical weight: 11.14 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S6
InterPro:
Length: 95 amino acids
Theoretical weight: 11.14 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21468 (Residues: 1-95; Coverage: 100%)
Pfam: Ribosomal protein S6
InterPro:
Chain: k
Length: 156 amino acids
Theoretical weight: 17.92 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S7p/S5e
InterPro:
Length: 156 amino acids
Theoretical weight: 17.92 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21469 (Residues: 1-156; Coverage: 100%)
Pfam: Ribosomal protein S7p/S5e
InterPro:
Chain: l
Length: 132 amino acids
Theoretical weight: 14.9 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S8
InterPro:
Length: 132 amino acids
Theoretical weight: 14.9 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P12879 (Residues: 1-132; Coverage: 100%)
Pfam: Ribosomal protein S8
InterPro:
Chain: m
Length: 130 amino acids
Theoretical weight: 14.34 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S9/S16
InterPro:
Length: 130 amino acids
Theoretical weight: 14.34 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21470 (Residues: 1-130; Coverage: 100%)
Pfam: Ribosomal protein S9/S16
InterPro:
Chain: n
Length: 102 amino acids
Theoretical weight: 11.69 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S10p/S20e
InterPro:
Length: 102 amino acids
Theoretical weight: 11.69 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21471 (Residues: 1-102; Coverage: 100%)
Pfam: Ribosomal protein S10p/S20e
InterPro:
Chain: o
Length: 131 amino acids
Theoretical weight: 13.99 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S11
InterPro:
Length: 131 amino acids
Theoretical weight: 13.99 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P04969 (Residues: 1-131; Coverage: 100%)
Pfam: Ribosomal protein S11
InterPro:
Chain: p
Length: 138 amino acids
Theoretical weight: 15.25 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S12/S23
InterPro:
Length: 138 amino acids
Theoretical weight: 15.25 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21472 (Residues: 1-138; Coverage: 100%)
Pfam: Ribosomal protein S12/S23
InterPro:
Chain: q
Length: 121 amino acids
Theoretical weight: 13.82 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S13/S18
InterPro:
Length: 121 amino acids
Theoretical weight: 13.82 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P20282 (Residues: 1-121; Coverage: 100%)
Pfam: Ribosomal protein S13/S18
InterPro:
Chain: r
Length: 61 amino acids
Theoretical weight: 7.26 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S14p/S29e
InterPro:
Length: 61 amino acids
Theoretical weight: 7.26 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P12878 (Residues: 1-61; Coverage: 100%)
Pfam: Ribosomal protein S14p/S29e
InterPro:
Chain: s
Length: 89 amino acids
Theoretical weight: 10.6 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S15
InterPro:
Length: 89 amino acids
Theoretical weight: 10.6 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21473 (Residues: 1-89; Coverage: 100%)
Pfam: Ribosomal protein S15
InterPro:
Chain: t
Length: 90 amino acids
Theoretical weight: 10.15 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S16
InterPro:
Length: 90 amino acids
Theoretical weight: 10.15 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21474 (Residues: 1-90; Coverage: 100%)
Pfam: Ribosomal protein S16
InterPro:
Chain: u
Length: 87 amino acids
Theoretical weight: 10.22 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S17
InterPro:
Length: 87 amino acids
Theoretical weight: 10.22 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P12874 (Residues: 1-87; Coverage: 100%)
Pfam: Ribosomal protein S17
InterPro:
Chain: v
Length: 79 amino acids
Theoretical weight: 8.99 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S18
InterPro:
Length: 79 amino acids
Theoretical weight: 8.99 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21475 (Residues: 1-79; Coverage: 100%)
Pfam: Ribosomal protein S18
InterPro:
Chain: w
Length: 92 amino acids
Theoretical weight: 10.61 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S19
InterPro:
Length: 92 amino acids
Theoretical weight: 10.61 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21476 (Residues: 1-92; Coverage: 100%)
Pfam: Ribosomal protein S19
InterPro:
Chain: x
Length: 88 amino acids
Theoretical weight: 9.62 KDa
Source organism: Bacillus subtilis
UniProt:
Pfam: Ribosomal protein S20
InterPro:
Length: 88 amino acids
Theoretical weight: 9.62 KDa
Source organism: Bacillus subtilis
UniProt:
- Canonical: P21477 (Residues: 1-88; Coverage: 100%)
Pfam: Ribosomal protein S20
InterPro:
Name:
23S ribosomal RNA
Representative chains: A
Length: 2928 nucleotides
Theoretical weight: 949.61 KDa
Rfam: Bacterial large subunit ribosomal RNA
Representative chains: A
Length: 2928 nucleotides
Theoretical weight: 949.61 KDa
Rfam: Bacterial large subunit ribosomal RNA
Name:
5S ribosomal RNA
Representative chains: B
Length: 119 nucleotides
Theoretical weight: 38.42 KDa
Rfam: 5S ribosomal RNA
Representative chains: B
Length: 119 nucleotides
Theoretical weight: 38.42 KDa
Rfam: 5S ribosomal RNA
Name:
16S ribosomal RNA
Representative chains: W
Length: 1555 nucleotides
Theoretical weight: 503.7 KDa
Rfam: Bacterial small subunit ribosomal RNA
Representative chains: W
Length: 1555 nucleotides
Theoretical weight: 503.7 KDa
Rfam: Bacterial small subunit ribosomal RNA
Name:
tRNA
Representative chains: 1, y
Length: 77 nucleotides
Theoretical weight: 24.82 KDa
Rfam: tRNA
Representative chains: 1, y
Length: 77 nucleotides
Theoretical weight: 24.82 KDa
Rfam: tRNA