7vea

Electron Microscopy
3.7Å resolution

Pentacylindrical allophycocyanin core from Thermosynechococcus vulcanus

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero 90-mer (preferred)
PDBe Complex ID:
PDB-CPX-156110 (preferred)
Entry contents:
5 distinct polypeptide molecules
Macromolecules (5 distinct):
Allophycocyanin alpha chain Chains: aA, aC, aE, aG, aI, aK, aO, aQ, bM, bO, bQ, bS, bU, bW, cA, cC, cE, cG, cI, cK, dA, dC, dE, dG, dI, dK, dO, dQ, eM, eO, eQ, eS, eU, eW, fA, fC, fE, fG, fI, fK
Molecule details ›
Chains: aA, aC, aE, aG, aI, aK, aO, aQ, bM, bO, bQ, bS, bU, bW, cA, cC, cE, cG, cI, cK, dA, dC, dE, dG, dI, dK, dO, dQ, eM, eO, eQ, eS, eU, eW, fA, fC, fE, fG, fI, fK
Length: 161 amino acids
Theoretical weight: 17.56 KDa
Source organism: Thermosynechococcus vestitus BP-1
UniProt:
  • Canonical: P50030 (Residues: 1-161; Coverage: 100%)
Gene names: apcA, tll0957
Sequence domains: Phycobilisome protein
Allophycocyanin beta chain Chains: aB, aD, aF, aH, aJ, aL, aN, aP, bN, bP, bR, bT, bV, bX, cB, cD, cF, cH, cJ, cL, dB, dD, dF, dH, dJ, dL, dN, dP, eN, eP, eR, eT, eV, eX, fB, fD, fF, fH, fJ, fL
Molecule details ›
Chains: aB, aD, aF, aH, aJ, aL, aN, aP, bN, bP, bR, bT, bV, bX, cB, cD, cF, cH, cJ, cL, dB, dD, dF, dH, dJ, dL, dN, dP, eN, eP, eR, eT, eV, eX, fB, fD, fF, fH, fJ, fL
Length: 161 amino acids
Theoretical weight: 17.39 KDa
Source organism: Thermosynechococcus vestitus BP-1
UniProt:
  • Canonical: P50031 (Residues: 1-161; Coverage: 100%)
Gene names: apcB, tll0956
Sequence domains: Phycobilisome protein
Phycobiliprotein ApcE Chains: aM, dM
Molecule details ›
Chains: aM, dM
Length: 1139 amino acids
Theoretical weight: 127.77 KDa
Source organism: Thermosynechococcus vestitus BP-1
UniProt:
  • Canonical: Q8DGF2 (Residues: 1-1139; Coverage: 100%)
Gene name: apcE
Sequence domains:
Phycobilisome core component Chains: aR, dR
Molecule details ›
Chains: aR, dR
Length: 169 amino acids
Theoretical weight: 18.76 KDa
Source organism: Thermosynechococcus vestitus BP-1
UniProt:
  • Canonical: Q8DHC5 (Residues: 1-169; Coverage: 100%)
Gene name: apcF
Sequence domains: Phycobilisome protein
Phycobilisome 7.8 kDa linker polypeptide, allophycocyanin-associated, core Chains: aS, bY, cM, dS, eY, fM
Molecule details ›
Chains: aS, bY, cM, dS, eY, fM
Length: 67 amino acids
Theoretical weight: 7.88 KDa
Source organism: Thermosynechococcus vestitus BP-1
UniProt:
  • Canonical: P50036 (Residues: 1-67; Coverage: 100%)
Gene names: apcC, tsl0955
Sequence domains: CpcD/allophycocyanin linker domain

Ligands and Environments

1 bound ligand:
1 modified residue:

Experiments and Validation Details

Entry percentile scores
Resolution: 3.7Å
Relevant EMDB volumes: EMD-31944