7wr8

Electron Microscopy
3.5Å resolution

Local CryoEM structure of the SARS-CoV-2 S6P(B.1.1.529) in complex with BD55-3152 Fab

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-225228 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (4 distinct):
Spike protein S1 Chain: R
Molecule details ›
Chain: R
Length: 193 amino acids
Theoretical weight: 21.97 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 334-526; Coverage: 15%)
Gene names: 2, S
Sequence domains: Betacoronavirus spike glycoprotein S1, receptor binding
BD55-3152H Chain: A
Molecule details ›
Chain: A
Length: 260 amino acids
Theoretical weight: 27.82 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
BD55-3152L Chain: B
Molecule details ›
Chain: B
Length: 233 amino acids
Theoretical weight: 24.83 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, FUC
No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.5Å
Relevant EMDB volumes: EMD-32718
Expression system: Homo sapiens