7xd2

Electron Microscopy
3.3Å resolution

SARS-CoV-2 S ectodomain trimer in complex with neutralizing antibody 10-5B

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Cellular component:

Structure analysis Details

Assembly composition:
hetero nonamer (preferred)
PDBe Complex ID:
PDB-CPX-276125 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Spike glycoprotein Chains: A, B, C
Molecule details ›
Chains: A, B, C
Length: 1298 amino acids
Theoretical weight: 143.54 KDa
Source organism: Severe acute respiratory syndrome coronavirus 2
Expression system: Homo sapiens
UniProt:
  • Canonical: P0DTC2 (Residues: 1-1208; Coverage: 95%)
Gene names: 2, S
Sequence domains:
H chain of antibody 10-5B Chains: D, E, I
Molecule details ›
Chains: D, E, I
Length: 117 amino acids
Theoretical weight: 12.52 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
L chian of antibody 10-5B Chains: H, J, L
Molecule details ›
Chains: H, J, L
Length: 107 amino acids
Theoretical weight: 11.37 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.3Å
Relevant EMDB volumes: EMD-33133
Expression system: Homo sapiens