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ISDra2 TnpB in complex with reRNA

Source organism: Deinococcus radiodurans R1
Biochemical function: metal ion binding
Biological process: transposition
Cellular component: not assigned

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GO terms

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Sequence families

Pfam Protein families (Pfam)
PF07282
Domain description: Putative transposase DNA-binding domain
Occurring in:
  1. RNA-guided DNA endonuclease TnpB
The deposited structure of PDB entry 8bf8 contains 1 copy of Pfam domain PF07282 (Putative transposase DNA-binding domain) in RNA-guided DNA endonuclease TnpB. Showing 1 copy in chain A.

PF01385
Domain description: Probable transposase
Occurring in:
  1. RNA-guided DNA endonuclease TnpB
The deposited structure of PDB entry 8bf8 contains 1 copy of Pfam domain PF01385 (Probable transposase) in RNA-guided DNA endonuclease TnpB. Showing 1 copy in chain A.

PF12323
Domain description: Helix-turn-helix domain
Occurring in:
  1. RNA-guided DNA endonuclease TnpB
The deposited structure of PDB entry 8bf8 contains 1 copy of Pfam domain PF12323 (Helix-turn-helix domain) in RNA-guided DNA endonuclease TnpB. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR010095
Domain description: Cas12f1-like, TNB domain
Occurring in:
  1. RNA-guided DNA endonuclease TnpB
IPR037278
Domain description: ARFGAP/RecO-like zinc finger
Occurring in:
  1. RNA-guided DNA endonuclease TnpB
IPR001959
Domain description: Probable transposase, IS891/IS1136/IS1341
Occurring in:
  1. RNA-guided DNA endonuclease TnpB
IPR021027
Domain description: Transposase, putative, helix-turn-helix domain
Occurring in:
  1. RNA-guided DNA endonuclease TnpB

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