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Acheta domesticus segmented densovirus high buoyancy fraction 1 (HB1) empty capsid structure

Electron Microscopy
3Å resolution
PDB entry 8eu6 coloured by chain, front view.
PDB entry 8eu6 coloured by chain, side view.
PDB entry 8eu6 coloured by chain, top view.
Source organism: Solenopsis invicta-associated densovirus
Assembly composition:
homo 60-mer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Capsid protein
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Multimeric state: homo 60-mer
Accessible surface area: 537830.11 Å2
Buried surface area: 480413.91 Å2
Dissociation area: 145,679.85 Å2
Dissociation energy (ΔGdiss): 1,040.84 kcal/mol
Dissociation entropy (TΔSdiss): 348.44 kcal/mol
Symmetry number: 60
PDBe Complex ID: PDB-CPX-105974

Macromolecules

Capsid protein
Chain: A
Length: 318 amino acids
Theoretical weight: 36.29 KDa
Source organism: Solenopsis invicta-associated densovirus
Expression system: Acheta domesticus
UniProt:
  • Canonical: A0A891H5C3 (Residues: 49-357; Coverage: 86%)
Gene name: CP
Capsid protein in PDB entry 8eu6, assembly 1, front view.
Capsid protein in PDB entry 8eu6, assembly 1, side view.
Capsid protein in PDB entry 8eu6, assembly 1, top view.
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