› › Structure analysis

Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and azithromycin at 2.50A resolution

X-ray diffraction
2.5Å resolution
PDB entry 8fc2 coloured by chain, front view.
PDB entry 8fc2 coloured by chain, side view.
PDB entry 8fc2 coloured by chain, top view.
Source organisms:
Assembly composition:
hetero 53-mer (preferred)
Entry contents: 50 distinct polypeptide molecules
3 distinct RNA molecules

Quick links

Assemblies

Assembly 1 (preferred)
Download    3D Visualisation
Multimeric state: hetero 53-mer
PDBe Complex ID: PDB-CPX-221194
Assembly 2
Download    3D Visualisation
Multimeric state: hetero 53-mer
PDBe Complex ID: PDB-CPX-221194

Macromolecules

Large ribosomal subunit protein uL2
Chains: 1D, 2D
Length: 276 amino acids
Theoretical weight: 30.53 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P60405 (Residues: 1-276; Coverage: 100%)
Gene names: TTHA1689, rplB
Pfam:
Large ribosomal subunit protein uL2 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL2 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL2 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P60405  
127620406080100120140160180200220240260
 
100200
UniProt
P60405
Chains
Flexibility predictions
Ligand binding sites
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL3
Chains: 1E, 2E
Length: 206 amino acids
Theoretical weight: 22.45 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHN8 (Residues: 1-206; Coverage: 100%)
Gene names: TTHA1692, rplC
Pfam: Ribosomal protein L3
Large ribosomal subunit protein uL3 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL3 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL3 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHN8  
120620406080100120140160180200
 
50100150200
UniProt
Q5SHN8
Chains
Ligand binding sites
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL4
Chains: 1F, 2F
Length: 210 amino acids
Theoretical weight: 23.27 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHN9 (Residues: 1-210; Coverage: 100%)
Gene names: TTHA1691, rplD
Pfam: Ribosomal protein L4/L1 family
Large ribosomal subunit protein uL4 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL4 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL4 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHN9  
121020406080100120140160180200
 
50100150200
UniProt
Q5SHN9
Chains
Ligand binding sites
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL5
Chains: 1G, 2G
Length: 182 amino acids
Theoretical weight: 21.06 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHQ0 (Residues: 1-182; Coverage: 100%)
Gene names: TTHA1680, rplE
Pfam:
Large ribosomal subunit protein uL5 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL5 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL5 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHQ0  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL6
Chains: 1H, 2H
Length: 180 amino acids
Theoretical weight: 19.57 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P0DOY8 (Residues: 1-180; Coverage: 100%)
Gene names: TTHA1677, rplF
Pfam: Ribosomal protein L6
Large ribosomal subunit protein uL6 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL6 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL6 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P0DOY8  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL9
Chains: 1I, 2I
Length: 148 amino acids
Theoretical weight: 16.42 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SLQ1 (Residues: 1-148; Coverage: 100%)
Gene names: TTHA0242, rplI
Pfam:
Large ribosomal subunit protein bL9 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL9 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL9 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SLQ1  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL13
Chains: 1N, 2N
Length: 140 amino acids
Theoretical weight: 15.93 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P60488 (Residues: 1-140; Coverage: 100%)
Gene names: TTHA1465, rplM
Pfam: Ribosomal protein L13
Large ribosomal subunit protein uL13 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL13 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL13 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P60488  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL14
Chains: 1O, 2O
Length: 122 amino acids
Theoretical weight: 13.32 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHP8 (Residues: 1-122; Coverage: 100%)
Gene names: TTHA1682, rplN
Pfam: Ribosomal protein L14p/L23e
Large ribosomal subunit protein uL14 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL14 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL14 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHP8  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL15
Chains: 1P, 2P
Length: 150 amino acids
Theoretical weight: 16.32 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHQ7 (Residues: 1-150; Coverage: 100%)
Gene names: TTHA1673, rplO
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Large ribosomal subunit protein uL15 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL15 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL15 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHQ7  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL16
Chains: 1Q, 2Q
Length: 141 amino acids
Theoretical weight: 15.99 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P60489 (Residues: 1-141; Coverage: 100%)
Gene names: TTHA1685, rplP
Pfam: Ribosomal protein L16p/L10e
Large ribosomal subunit protein uL16 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL16 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL16 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P60489  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL17
Chains: 1R, 2R
Length: 118 amino acids
Theoretical weight: 13.75 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q9Z9H5 (Residues: 1-118; Coverage: 100%)
Gene names: TTHA1663, rpl17, rplQ
Pfam: Ribosomal protein L17
Large ribosomal subunit protein bL17 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL17 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL17 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q9Z9H5  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL18
Chains: 1S, 2S
Length: 112 amino acids
Theoretical weight: 12.64 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHQ4 (Residues: 1-112; Coverage: 100%)
Gene names: TTHA1676, rplR
Pfam: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
Large ribosomal subunit protein uL18 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL18 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL18 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHQ4  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL19
Chains: 1T, 2T
Length: 146 amino acids
Theoretical weight: 17.19 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P60490 (Residues: 1-146; Coverage: 100%)
Gene names: TTHA1031, rplS
Pfam: Ribosomal protein L19
Large ribosomal subunit protein bL19 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL19 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL19 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P60490  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL20
Chains: 1U, 2U
Length: 118 amino acids
Theoretical weight: 13.78 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P60491 (Residues: 1-118; Coverage: 100%)
Gene names: TTHA0553, rplT
Pfam: Ribosomal protein L20
Large ribosomal subunit protein bL20 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL20 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL20 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P60491  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL21
Chains: 1V, 2V
Length: 101 amino acids
Theoretical weight: 11.07 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P60492 (Residues: 1-101; Coverage: 100%)
Gene names: TTHA1783, rplU
Pfam: Ribosomal prokaryotic L21 protein
Large ribosomal subunit protein bL21 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL21 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL21 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P60492  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL22
Chains: 1W, 2W
Length: 113 amino acids
Theoretical weight: 12.81 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHP3 (Residues: 1-113; Coverage: 100%)
Gene names: TTHA1687, rplV
Pfam: Ribosomal protein L22p/L17e
Large ribosomal subunit protein uL22 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL22 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL22 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHP3  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL23
Chains: 1X, 2X
Length: 96 amino acids
Theoretical weight: 10.76 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHP0 (Residues: 1-96; Coverage: 100%)
Gene names: TTHA1690, rplW
Pfam: Ribosomal protein L23
Large ribosomal subunit protein uL23 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL23 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL23 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHP0  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL24
Chains: 1Y, 2Y
Length: 110 amino acids
Theoretical weight: 12.09 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHP9 (Residues: 1-110; Coverage: 100%)
Gene names: TTHA1681, rplX
Pfam:
Large ribosomal subunit protein uL24 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL24 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL24 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHP9  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL25
Chains: 1Z, 2Z
Length: 206 amino acids
Theoretical weight: 23.24 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHZ1 (Residues: 1-206; Coverage: 100%)
Gene names: TTHA1589, rpl25, rplY, rptL5
Pfam:
Large ribosomal subunit protein bL25 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL25 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL25 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHZ1  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL27
Chains: 10, 20
Length: 85 amino acids
Theoretical weight: 9.53 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P60493 (Residues: 1-85; Coverage: 100%)
Gene names: TTHA1782, rpmA
Pfam: Ribosomal L27 protein
Large ribosomal subunit protein bL27 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL27 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL27 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P60493  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL28
Chains: 11, 21
Length: 98 amino acids
Theoretical weight: 11 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P60494 (Residues: 1-98; Coverage: 100%)
Gene names: TTHA0042, rpmB
Pfam: Ribosomal L28 family
Large ribosomal subunit protein bL28 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL28 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL28 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P60494  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL29
Chains: 12, 22
Length: 72 amino acids
Theoretical weight: 8.67 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHP6 (Residues: 1-72; Coverage: 100%)
Gene names: TTHA1684, rpmC
Pfam: Ribosomal L29 protein
Large ribosomal subunit protein uL29 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL29 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL29 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHP6  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL30
Chains: 13, 23
Length: 60 amino acids
Theoretical weight: 6.8 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHQ6 (Residues: 1-60; Coverage: 100%)
Gene names: TTHA1674, rpmD
Pfam: Ribosomal protein L30p/L7e
Large ribosomal subunit protein uL30 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein uL30 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein uL30 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHQ6  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL31
Chains: 14, 24
Length: 71 amino acids
Theoretical weight: 8.3 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SJE1 (Residues: 1-71; Coverage: 100%)
Gene names: TTHA1073, rpmE
Pfam: Ribosomal protein L31
Large ribosomal subunit protein bL31 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL31 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL31 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SJE1  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL32
Chains: 15, 25
Length: 60 amino acids
Theoretical weight: 6.72 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P80339 (Residues: 1-60; Coverage: 100%)
Gene names: TTHA0418, rpl32, rpmF
Pfam: Ribosomal L32p protein family
Large ribosomal subunit protein bL32 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL32 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL32 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P80339  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL33
Chains: 16, 26
Length: 54 amino acids
Theoretical weight: 6.63 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P35871 (Residues: 1-54; Coverage: 100%)
Gene names: TTHA0250, rpl33, rpmG
Pfam: Ribosomal protein L33
Large ribosomal subunit protein bL33 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL33 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL33 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P35871  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL34
Chains: 17, 27
Length: 49 amino acids
Theoretical weight: 6.13 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P80340 (Residues: 1-49; Coverage: 100%)
Gene names: TTHA0446, rpl34, rpmH
Pfam: Ribosomal protein L34
Large ribosomal subunit protein bL34 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL34 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL34 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P80340  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL35
Chains: 18, 28
Length: 65 amino acids
Theoretical weight: 7.51 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SKU1 (Residues: 1-65; Coverage: 100%)
Gene names: TTHA0552, rpmI
Pfam: Ribosomal protein L35
Large ribosomal subunit protein bL35 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL35 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL35 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SKU1  
Loading Protvista...
Molecule details ›

Search similar proteins

Large ribosomal subunit protein bL36
Chains: 19, 29
Length: 37 amino acids
Theoretical weight: 4.44 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHR2 (Residues: 1-37; Coverage: 100%)
Gene names: TTHA1668, rpmJ
Pfam: Ribosomal protein L36
Large ribosomal subunit protein bL36 in PDB entry 8fc2, assembly 1, front view.
Large ribosomal subunit protein bL36 in PDB entry 8fc2, assembly 1, side view.
Large ribosomal subunit protein bL36 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHR2  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS2
Chains: 1b, 2b
Length: 256 amino acids
Theoretical weight: 29.32 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P80371 (Residues: 1-256; Coverage: 100%)
Gene names: TTHA0861, rps2, rpsB
Pfam: Ribosomal protein S2
Small ribosomal subunit protein uS2 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS2 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS2 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P80371  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS3
Chains: 1c, 2c
Length: 239 amino acids
Theoretical weight: 26.75 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P80372 (Residues: 1-239; Coverage: 100%)
Gene names: TTHA1686, rps3, rpsC
Pfam:
Small ribosomal subunit protein uS3 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS3 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS3 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P80372  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS4
Chains: 1d, 2d
Length: 209 amino acids
Theoretical weight: 24.37 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P80373 (Residues: 1-209; Coverage: 100%)
Gene names: TTHA1665, rps4, rpsD
Pfam:
Small ribosomal subunit protein uS4 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS4 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS4 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P80373  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS5
Chains: 1e, 2e
Length: 162 amino acids
Theoretical weight: 17.58 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHQ5 (Residues: 1-162; Coverage: 100%)
Gene names: TTHA1675, rpsE
Pfam:
Small ribosomal subunit protein uS5 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS5 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS5 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHQ5  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein bS6
Chains: 1f, 2f
Length: 101 amino acids
Theoretical weight: 11.99 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SLP8 (Residues: 1-101; Coverage: 100%)
Gene names: TTHA0245, rpsF
Pfam: Ribosomal protein S6
Small ribosomal subunit protein bS6 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein bS6 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein bS6 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SLP8  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS7
Chains: 1g, 2g
Length: 156 amino acids
Theoretical weight: 18.05 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P17291 (Residues: 1-156; Coverage: 100%)
Gene names: TTHA1696, rps7, rpsG
Pfam: Ribosomal protein S7p/S5e
Small ribosomal subunit protein uS7 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS7 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS7 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P17291  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS8
Chains: 1h, 2h
Length: 138 amino acids
Theoretical weight: 15.87 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P0DOY9 (Residues: 1-138; Coverage: 100%)
Gene names: TTHA1678, rpsH
Pfam: Ribosomal protein S8
Small ribosomal subunit protein uS8 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS8 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS8 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P0DOY9  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS9
Chains: 1i, 2i
Length: 128 amino acids
Theoretical weight: 14.41 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P80374 (Residues: 1-128; Coverage: 100%)
Gene names: TTHA1464, rps9, rpsI
Pfam: Ribosomal protein S9/S16
Small ribosomal subunit protein uS9 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS9 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS9 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P80374  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS10
Chains: 1j, 2j
Length: 105 amino acids
Theoretical weight: 11.95 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHN7 (Residues: 1-105; Coverage: 100%)
Gene names: TTHA1693, rpsJ
Pfam: Ribosomal protein S10p/S20e
Small ribosomal subunit protein uS10 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS10 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS10 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHN7  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS11
Chains: 1k, 2k
Length: 129 amino acids
Theoretical weight: 13.74 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P80376 (Residues: 1-129; Coverage: 100%)
Gene names: TTHA1666, rps11, rpsK
Pfam: Ribosomal protein S11
Small ribosomal subunit protein uS11 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS11 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS11 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P80376  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS12
Chains: 1l, 2l
Length: 132 amino acids
Theoretical weight: 14.68 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHN3 (Residues: 1-132; Coverage: 100%)
Gene names: TTHA1697, rpsL
Pfam: Ribosomal protein S12/S23
Small ribosomal subunit protein uS12 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS12 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS12 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHN3  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS13
Chains: 1m, 2m
Length: 126 amino acids
Theoretical weight: 14.34 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P80377 (Residues: 1-126; Coverage: 100%)
Gene names: TTHA1667, rps13, rpsM
Pfam: Ribosomal protein S13/S18
Small ribosomal subunit protein uS13 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS13 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS13 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P80377  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS14
Chains: 1n, 2n
Length: 61 amino acids
Theoretical weight: 7.16 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P0DOY6 (Residues: 1-61; Coverage: 100%)
Gene names: TTHA1679, rpsN, rpsZ
Pfam: Ribosomal protein S14p/S29e
Small ribosomal subunit protein uS14 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS14 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS14 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P0DOY6  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS15
Chains: 1o, 2o
Length: 89 amino acids
Theoretical weight: 10.58 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SJ76 (Residues: 1-89; Coverage: 100%)
Gene names: TTHA1138, rpsO
Pfam: Ribosomal protein S15
Small ribosomal subunit protein uS15 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS15 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS15 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SJ76  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein bS16
Chains: 1p, 2p
Length: 88 amino acids
Theoretical weight: 10.41 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SJH3 (Residues: 1-88; Coverage: 100%)
Gene names: TTHA1035, rpsP
Pfam: Ribosomal protein S16
Small ribosomal subunit protein bS16 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein bS16 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein bS16 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SJH3  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS17
Chains: 1q, 2q
Length: 105 amino acids
Theoretical weight: 12.33 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P0DOY7 (Residues: 1-105; Coverage: 100%)
Gene names: TTHA1683, rpsQ
Pfam: Ribosomal protein S17
Small ribosomal subunit protein uS17 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS17 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS17 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P0DOY7  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein bS18
Chains: 1r, 2r
Length: 88 amino acids
Theoretical weight: 10.26 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SLQ0 (Residues: 1-88; Coverage: 100%)
Gene names: TTHA0243, rpsR
Pfam: Ribosomal protein S18
Small ribosomal subunit protein bS18 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein bS18 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein bS18 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SLQ0  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein uS19
Chains: 1s, 2s
Length: 93 amino acids
Theoretical weight: 10.61 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SHP2 (Residues: 1-93; Coverage: 100%)
Gene names: TTHA1688, rpsS
Pfam: Ribosomal protein S19
Small ribosomal subunit protein uS19 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein uS19 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein uS19 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SHP2  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein bS20
Chains: 1t, 2t
Length: 106 amino acids
Theoretical weight: 11.74 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: P80380 (Residues: 1-106; Coverage: 100%)
Gene names: TTHA1397, rps20, rpsT
Pfam: Ribosomal protein S20
Small ribosomal subunit protein bS20 in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein bS20 in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein bS20 in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P80380  
Loading Protvista...
Molecule details ›

Search similar proteins

Small ribosomal subunit protein bTHX
Chains: 1u, 2u
Length: 27 amino acids
Theoretical weight: 3.35 KDa
Source organism: Thermus thermophilus HB8
UniProt:
  • Canonical: Q5SIH3 (Residues: 1-27; Coverage: 100%)
Gene names: TTHA1396, rpsU
Pfam: 30S ribosomal protein Thx
Small ribosomal subunit protein bTHX in PDB entry 8fc2, assembly 1, front view.
Small ribosomal subunit protein bTHX in PDB entry 8fc2, assembly 1, side view.
Small ribosomal subunit protein bTHX in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q5SIH3  
Loading Protvista...
Molecule details ›

Search similar proteins

Ribosome-associated inhibitor A
Chains: 1y, 2y
Length: 113 amino acids
Theoretical weight: 12.8 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P0AD49 (Residues: 1-113; Coverage: 100%)
Gene names: JW2578, b2597, raiA, yfiA
Pfam: Sigma 54 modulation protein / S30EA ribosomal protein
Ribosome-associated inhibitor A in PDB entry 8fc2, assembly 1, front view.
Ribosome-associated inhibitor A in PDB entry 8fc2, assembly 1, side view.
Ribosome-associated inhibitor A in PDB entry 8fc2, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P0AD49  
Loading Protvista...
Molecule details ›

Search similar proteins

RNA chains 1A, 2A
Name: 23S ribosomal RNA
Representative chains: 1A, 2A
Length: 2915 nucleotides
Theoretical weight: 948.02 KDa
Rfam: Bacterial large subunit ribosomal RNA
23S ribosomal RNA in PDB entry 8fc2, assembly 1, front view.
23S ribosomal RNA in PDB entry 8fc2, assembly 1, side view.
23S ribosomal RNA in PDB entry 8fc2, assembly 1, top view.
Loading Protvista...
Molecule details ›

Search similar RNA

RNA chains 1B, 2B
Name: 5S ribosomal RNA
Representative chains: 1B, 2B
Length: 121 nucleotides
Theoretical weight: 39.19 KDa
Rfam: 5S ribosomal RNA
5S ribosomal RNA in PDB entry 8fc2, assembly 1, front view.
5S ribosomal RNA in PDB entry 8fc2, assembly 1, side view.
5S ribosomal RNA in PDB entry 8fc2, assembly 1, top view.
Loading Protvista...
Molecule details ›

Search similar RNA

RNA chains 1a, 2a
Name: 16S ribosomal RNA
Representative chains: 1a, 2a
Length: 1521 nucleotides
Theoretical weight: 493.86 KDa
Rfam: Bacterial small subunit ribosomal RNA
16S ribosomal RNA in PDB entry 8fc2, assembly 1, front view.
16S ribosomal RNA in PDB entry 8fc2, assembly 1, side view.
16S ribosomal RNA in PDB entry 8fc2, assembly 1, top view.
Loading Protvista...
Molecule details ›

Search similar RNA

Quick links