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TFIIIA-TFIIIC-Brf1-TBP complex bound to 5S rRNA gene

Source organisms:
Biochemical function: DNA binding
Biological process: 5S class rRNA transcription by RNA polymerase III
Cellular component: nucleus

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GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF00352
Domain description: Transcription factor TFIID (or TATA-binding protein, TBP)
Occurring in:
  1. TATA-box-binding protein; Transcription factor IIIB 70 kDa subunit
The deposited structure of PDB entry 8ffz contains 2 copies of Pfam domain PF00352 (Transcription factor TFIID (or TATA-binding protein, TBP)) in TATA-box-binding protein. Showing 2 copies in chain H.

PF00382
Domain description: Transcription factor TFIIB repeat
Occurring in:
  1. TATA-box-binding protein; Transcription factor IIIB 70 kDa subunit
The deposited structure of PDB entry 8ffz contains 2 copies of Pfam domain PF00382 (Transcription factor TFIIB repeat) in TATA-box-binding protein. Showing 2 copies in chain H (some of the copies are out of the observed residue ranges!).

PF00096
Domain description: Zinc finger, C2H2 type
Occurring in:
  1. Transcription factor IIIA
The deposited structure of PDB entry 8ffz contains 3 copies of Pfam domain PF00096 (Zinc finger, C2H2 type) in Transcription factor IIIA. Showing 3 copies in chain A.

PF07741
Domain description: Brf1-like TBP-binding domain
Occurring in:
  1. TATA-box-binding protein; Transcription factor IIIB 70 kDa subunit
The deposited structure of PDB entry 8ffz contains 1 copy of Pfam domain PF07741 (Brf1-like TBP-binding domain) in TATA-box-binding protein. Showing 1 copy in chain H (this domain is out of the observed residue ranges!).

PF08271
Domain description: TFIIB zinc-binding
Occurring in:
  1. TATA-box-binding protein; Transcription factor IIIB 70 kDa subunit
The deposited structure of PDB entry 8ffz contains 1 copy of Pfam domain PF08271 (TFIIB zinc-binding) in TATA-box-binding protein. Showing 1 copy in chain H (this domain is out of the observed residue ranges!).

PF10419
Domain description: TFIIIC subunit triple barrel domain
Occurring in:
  1. Transcription factor tau 55 kDa subunit
The deposited structure of PDB entry 8ffz contains 1 copy of Pfam domain PF10419 (TFIIIC subunit triple barrel domain) in Transcription factor tau 55 kDa subunit. Showing 1 copy in chain G.

PF00300
Domain description: Histidine phosphatase superfamily (branch 1)
Occurring in:
  1. Transcription factor tau 55 kDa subunit
The deposited structure of PDB entry 8ffz contains 1 copy of Pfam domain PF00300 (Histidine phosphatase superfamily (branch 1)) in Transcription factor tau 55 kDa subunit. Showing 1 copy in chain G.

PF12660
Domain description: Putative zinc-finger of transcription factor IIIC complex
Occurring in:
  1. Transcription factor tau 60 kDa subunit
The deposited structure of PDB entry 8ffz contains 1 copy of Pfam domain PF12660 (Putative zinc-finger of transcription factor IIIC complex) in Transcription factor tau 60 kDa subunit. Showing 1 copy in chain F.

PF09734
Domain description: RNA polymerase III transcription factor (TF)IIIC subunit HTH domain
Occurring in:
  1. Transcription factor tau 95 kDa subunit
The deposited structure of PDB entry 8ffz contains 1 copy of Pfam domain PF09734 (RNA polymerase III transcription factor (TF)IIIC subunit HTH domain) in Transcription factor tau 95 kDa subunit. Showing 1 copy in chain D.

PF17682
Domain description: Tau95 Triple barrel domain
Occurring in:
  1. Transcription factor tau 95 kDa subunit
The deposited structure of PDB entry 8ffz contains 1 copy of Pfam domain PF17682 (Tau95 Triple barrel domain) in Transcription factor tau 95 kDa subunit. Showing 1 copy in chain D.

PF13181
Domain description: Tetratricopeptide repeat
Occurring in:
  1. Transcription factor tau 131 kDa subunit
The deposited structure of PDB entry 8ffz contains 1 copy of Pfam domain PF13181 (Tetratricopeptide repeat) in Transcription factor tau 131 kDa subunit. Showing 1 copy in chain C.

PF13432
Domain description: Tetratricopeptide repeat
Occurring in:
  1. Transcription factor tau 131 kDa subunit
The deposited structure of PDB entry 8ffz contains 1 copy of Pfam domain PF13432 (Tetratricopeptide repeat) in Transcription factor tau 131 kDa subunit. Showing 1 copy in chain C.

PF20222
Domain description: Family of unknown function (DUF6581)
Occurring in:
  1. Transcription factor tau 138 kDa subunit
The deposited structure of PDB entry 8ffz contains 1 copy of Pfam domain PF20222 (Family of unknown function (DUF6581)) in Transcription factor tau 138 kDa subunit. Showing 1 copy in chain B.

PF21552
Domain description: Transcription factor tau 138 kDa subunit, extended winged helix
Occurring in:
  1. Transcription factor tau 138 kDa subunit

PF04182
Domain description: B-block binding subunit of TFIIIC
Occurring in:
  1. Transcription factor tau 138 kDa subunit
The deposited structure of PDB entry 8ffz contains 1 copy of Pfam domain PF04182 (B-block binding subunit of TFIIIC) in Transcription factor tau 138 kDa subunit. Showing 1 copy in chain B.

PF13894
Domain description: C2H2-type zinc finger
Occurring in:
  1. Transcription factor IIIA
The deposited structure of PDB entry 8ffz contains 1 copy of Pfam domain PF13894 (C2H2-type zinc finger) in Transcription factor IIIA. Showing 1 copy in chain A.

Rfam RNA family (Rfam)
RF00001
Domain description: 5S ribosomal RNA
Occurring in:
  1. DNA (151-MER)
The deposited structure of PDB entry 8ffz contains 1 copy of Rfam domain RF00001 (5S ribosomal RNA) in DNA (151-MER). Showing 1 copy in chain I.

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