› › Structure analysis

Human nuclear pre-60S ribosomal subunit (State I1)

Electron Microscopy
2.67Å resolution
PDB entry 8fl2 coloured by chain, front view.
PDB entry 8fl2 coloured by chain, side view.
PDB entry 8fl2 coloured by chain, top view.
Source organism: Homo sapiens
Assembly composition:
hetero 65-mer (preferred)
Entry contents: 59 distinct polypeptide molecules
4 distinct RNA molecules

Quick links

Assemblies

Assembly 1 (preferred)
Download    3D Visualisation
Multimeric state: hetero 65-mer
Accessible surface area: 964852.74 Å2
Buried surface area: 648159.07 Å2
Dissociation area: 951.46 Å2
Dissociation energy (ΔGdiss): 9.56 kcal/mol
Dissociation entropy (TΔSdiss): 8.98 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-221148

Macromolecules

Large ribosomal subunit protein uL11
Chain: BA
Length: 165 amino acids
Theoretical weight: 17.85 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P30050 (Residues: 1-165; Coverage: 100%)
Gene name: RPL12
Pfam:
Large ribosomal subunit protein uL11 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL11 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL11 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL1
Chain: BB
Length: 217 amino acids
Theoretical weight: 24.88 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62906 (Residues: 1-217; Coverage: 100%)
Gene names: NEDD6, RPL10A
Pfam: Ribosomal protein L1p/L10e family
Large ribosomal subunit protein uL1 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL1 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL1 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Ribosomal biogenesis protein LAS1L
Chain: BD
Length: 734 amino acids
Theoretical weight: 83.15 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9Y4W2 (Residues: 1-734; Coverage: 100%)
Gene names: LAS1L, MSTP060
Pfam: Las1-like
Ribosomal biogenesis protein LAS1L in PDB entry 8fl2, assembly 1, front view.
Ribosomal biogenesis protein LAS1L in PDB entry 8fl2, assembly 1, side view.
Ribosomal biogenesis protein LAS1L in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL5
Chain: L5
Length: 178 amino acids
Theoretical weight: 20.29 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62913 (Residues: 1-178; Coverage: 100%)
Gene name: RPL11
Pfam:
Large ribosomal subunit protein uL5 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL5 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL5 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL13
Chain: L6
Length: 211 amino acids
Theoretical weight: 24.32 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P26373 (Residues: 1-211; Coverage: 100%)
Gene names: BBC1, OK/SW-cl.46, RPL13
Pfam: Ribosomal protein L13e
Large ribosomal subunit protein eL13 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL13 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL13 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL13
Chain: L7
Length: 203 amino acids
Theoretical weight: 23.63 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P40429 (Residues: 1-203; Coverage: 100%)
Gene name: RPL13A
Pfam: Ribosomal protein L13
Large ribosomal subunit protein uL13 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL13 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL13 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL14
Chain: L8
Length: 215 amino acids
Theoretical weight: 23.49 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P50914 (Residues: 1-215; Coverage: 100%)
Gene name: RPL14
Pfam: Ribosomal protein L14
Large ribosomal subunit protein eL14 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL14 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL14 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL15
Chain: L9
Length: 204 amino acids
Theoretical weight: 24.21 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P61313 (Residues: 1-204; Coverage: 100%)
Gene names: EC45, RPL15, TCBAP0781
Pfam: Ribosomal L15
Large ribosomal subunit protein eL15 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL15 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL15 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL22
Chain: LA
Length: 184 amino acids
Theoretical weight: 21.44 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P18621 (Residues: 1-184; Coverage: 100%)
Gene name: RPL17
Pfam: Ribosomal protein L22p/L17e
Large ribosomal subunit protein uL22 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL22 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL22 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL18
Chain: LB
Length: 188 amino acids
Theoretical weight: 21.69 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q07020 (Residues: 1-188; Coverage: 100%)
Gene name: RPL18
Pfam: Ribosomal protein 60S L18 and 50S L18e
Large ribosomal subunit protein eL18 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL18 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL18 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL20
Chain: LC
Length: 176 amino acids
Theoretical weight: 20.81 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q02543 (Residues: 1-176; Coverage: 100%)
Gene name: RPL18A
Pfam: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
Large ribosomal subunit protein eL20 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL20 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL20 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL19
Chain: LD
Length: 196 amino acids
Theoretical weight: 23.54 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P84098 (Residues: 1-196; Coverage: 100%)
Gene name: RPL19
Pfam: Ribosomal protein L19e
Large ribosomal subunit protein eL19 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL19 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL19 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL21
Chain: LE
Length: 160 amino acids
Theoretical weight: 18.61 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P46778 (Residues: 1-160; Coverage: 100%)
Gene name: RPL21
Pfam: Ribosomal protein L21e
Large ribosomal subunit protein eL21 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL21 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL21 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL22
Chain: LF
Length: 128 amino acids
Theoretical weight: 14.81 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P35268 (Residues: 1-128; Coverage: 100%)
Gene name: RPL22
Pfam: Ribosomal L22e protein family
Large ribosomal subunit protein eL22 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL22 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL22 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL14
Chain: LG
Length: 140 amino acids
Theoretical weight: 14.89 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62829 (Residues: 1-140; Coverage: 100%)
Gene name: RPL23
Pfam: Ribosomal protein L14p/L23e
Large ribosomal subunit protein uL14 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL14 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL14 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL23
Chain: LH
Length: 156 amino acids
Theoretical weight: 17.74 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62750 (Residues: 1-156; Coverage: 100%)
Gene name: RPL23A
Pfam:
Large ribosomal subunit protein uL23 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL23 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL23 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL24
Chain: LI
Length: 145 amino acids
Theoretical weight: 17.3 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P61254 (Residues: 1-145; Coverage: 100%)
Gene name: RPL26
Pfam:
Large ribosomal subunit protein uL24 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL24 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL24 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL27
Chain: LJ
Length: 136 amino acids
Theoretical weight: 15.84 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P61353 (Residues: 1-136; Coverage: 100%)
Gene name: RPL27
Pfam:
Large ribosomal subunit protein eL27 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL27 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL27 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL15
Chain: LK
Length: 148 amino acids
Theoretical weight: 16.6 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P46776 (Residues: 1-148; Coverage: 100%)
Gene name: RPL27A
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Large ribosomal subunit protein uL15 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL15 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL15 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL28
Chain: LL
Length: 137 amino acids
Theoretical weight: 15.78 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P46779 (Residues: 1-137; Coverage: 100%)
Gene name: RPL28
Pfam: Ribosomal L28e protein family
Large ribosomal subunit protein eL28 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL28 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL28 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL3
Chain: LN
Length: 403 amino acids
Theoretical weight: 46.22 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P39023 (Residues: 1-403; Coverage: 100%)
Gene names: OK/SW-cl.32, RPL3
Pfam: Ribosomal protein L3
Large ribosomal subunit protein uL3 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL3 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL3 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL30
Chain: LO
Length: 115 amino acids
Theoretical weight: 12.81 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62888 (Residues: 1-115; Coverage: 100%)
Gene name: RPL30
Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Large ribosomal subunit protein eL30 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL30 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL30 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL31
Chain: LP
Length: 125 amino acids
Theoretical weight: 14.49 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62899 (Residues: 1-125; Coverage: 100%)
Gene name: RPL31
Pfam: Ribosomal protein L31e
Large ribosomal subunit protein eL31 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL31 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL31 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL32
Chain: LQ
Length: 135 amino acids
Theoretical weight: 15.9 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62910 (Residues: 1-135; Coverage: 100%)
Gene names: PP9932, RPL32
Pfam: Ribosomal protein L32
Large ribosomal subunit protein eL32 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL32 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL32 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL34
Chain: LR
Length: 117 amino acids
Theoretical weight: 13.33 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P49207 (Residues: 1-117; Coverage: 100%)
Gene name: RPL34
Pfam: Ribosomal protein L34e
Large ribosomal subunit protein eL34 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL34 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL34 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL29
Chain: LS
Length: 123 amino acids
Theoretical weight: 14.59 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P42766 (Residues: 1-123; Coverage: 100%)
Gene name: RPL35
Pfam: Ribosomal L29 protein
Large ribosomal subunit protein uL29 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL29 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL29 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL33
Chain: LT
Length: 110 amino acids
Theoretical weight: 12.56 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P18077 (Residues: 1-110; Coverage: 100%)
Gene names: GIG33, RPL35A
Pfam: Ribosomal protein L35Ae
Large ribosomal subunit protein eL33 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL33 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL33 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL36
Chain: LU
Length: 105 amino acids
Theoretical weight: 12.29 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9Y3U8 (Residues: 1-105; Coverage: 100%)
Gene name: RPL36
Pfam: Ribosomal protein L36e
Large ribosomal subunit protein eL36 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL36 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL36 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL37
Chain: LW
Length: 97 amino acids
Theoretical weight: 11.11 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P61927 (Residues: 1-97; Coverage: 100%)
Gene name: RPL37
Pfam: Ribosomal protein L37e
Large ribosomal subunit protein eL37 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL37 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL37 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL43
Chain: LX
Length: 92 amino acids
Theoretical weight: 10.3 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P61513 (Residues: 1-92; Coverage: 100%)
Gene name: RPL37A
Pfam: Ribosomal L37ae protein family
Large ribosomal subunit protein eL43 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL43 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL43 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL38
Chain: LY
Length: 70 amino acids
Theoretical weight: 8.24 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P63173 (Residues: 1-70; Coverage: 100%)
Gene name: RPL38
Pfam: Ribosomal L38e protein family
Large ribosomal subunit protein eL38 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL38 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL38 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL39
Chain: LZ
Length: 51 amino acids
Theoretical weight: 6.43 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62891 (Residues: 1-51; Coverage: 100%)
Gene name: RPL39
Pfam: Ribosomal L39 protein
Large ribosomal subunit protein eL39 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL39 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL39 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Guanine nucleotide-binding protein-like 3
Chain: NB
Length: 549 amino acids
Theoretical weight: 62.1 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9BVP2 (Residues: 1-549; Coverage: 100%)
Gene names: E2IG3, GNL3, NS
Pfam:
Guanine nucleotide-binding protein-like 3 in PDB entry 8fl2, assembly 1, front view.
Guanine nucleotide-binding protein-like 3 in PDB entry 8fl2, assembly 1, side view.
Guanine nucleotide-binding protein-like 3 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Nucleolar GTP-binding protein 2
Chain: NC
Length: 731 amino acids
Theoretical weight: 83.8 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q13823 (Residues: 1-731; Coverage: 100%)
Gene names: GNL2, NGP1
Pfam:
Nucleolar GTP-binding protein 2 in PDB entry 8fl2, assembly 1, front view.
Nucleolar GTP-binding protein 2 in PDB entry 8fl2, assembly 1, side view.
Nucleolar GTP-binding protein 2 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Ribosome biogenesis protein NSA2 homolog
Chain: NF
Length: 260 amino acids
Theoretical weight: 30.14 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: O95478 (Residues: 1-260; Coverage: 100%)
Gene names: HUSSY-29, NSA2, TINP1
Pfam: Ribosomal protein S8e
Ribosome biogenesis protein NSA2 homolog in PDB entry 8fl2, assembly 1, front view.
Ribosome biogenesis protein NSA2 homolog in PDB entry 8fl2, assembly 1, side view.
Ribosome biogenesis protein NSA2 homolog in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Notchless protein homolog 1
Chain: NJ
Length: 485 amino acids
Theoretical weight: 53.39 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9NVX2 (Residues: 1-485; Coverage: 100%)
Gene names: HUSSY-07, NLE1
Pfam:
Notchless protein homolog 1 in PDB entry 8fl2, assembly 1, front view.
Notchless protein homolog 1 in PDB entry 8fl2, assembly 1, side view.
Notchless protein homolog 1 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Protein LLP homolog
Chain: NK
Length: 129 amino acids
Theoretical weight: 15.27 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9BRT6 (Residues: 1-129; Coverage: 100%)
Gene names: C12orf31, LLPH, cPERP-G
Pfam: LLP homolog
Protein LLP homolog in PDB entry 8fl2, assembly 1, front view.
Protein LLP homolog in PDB entry 8fl2, assembly 1, side view.
Protein LLP homolog in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Ribosome biogenesis protein NOP53
Chain: NL
Length: 478 amino acids
Theoretical weight: 54.5 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9NZM5 (Residues: 1-478; Coverage: 100%)
Gene names: GLT, GLTSCR2, NOP53, PICT1
Pfam: Nop53 (60S ribosomal biogenesis)
Ribosome biogenesis protein NOP53 in PDB entry 8fl2, assembly 1, front view.
Ribosome biogenesis protein NOP53 in PDB entry 8fl2, assembly 1, side view.
Ribosome biogenesis protein NOP53 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Zinc finger protein 593
Chain: NP
Length: 134 amino acids
Theoretical weight: 15.23 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: O00488 (Residues: 1-134; Coverage: 100%)
Gene names: ZNF593, ZT86
Pfam: Zinc-finger double-stranded RNA-binding
Zinc finger protein 593 in PDB entry 8fl2, assembly 1, front view.
Zinc finger protein 593 in PDB entry 8fl2, assembly 1, side view.
Zinc finger protein 593 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Protein SDA1 homolog
Chain: NT
Length: 687 amino acids
Theoretical weight: 80.01 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9NVU7 (Residues: 1-687; Coverage: 100%)
Gene names: NUC130, SDAD1
Pfam:
Protein SDA1 homolog in PDB entry 8fl2, assembly 1, front view.
Protein SDA1 homolog in PDB entry 8fl2, assembly 1, side view.
Protein SDA1 homolog in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Testis-expressed protein 10
Chain: NU
Length: 929 amino acids
Theoretical weight: 105.81 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9NXF1 (Residues: 1-929; Coverage: 100%)
Gene names: L18, Nbla10363, TEX10
Pfam: Rix1 complex component involved in 60S ribosome maturation
Testis-expressed protein 10 in PDB entry 8fl2, assembly 1, front view.
Testis-expressed protein 10 in PDB entry 8fl2, assembly 1, side view.
Testis-expressed protein 10 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

WD repeat-containing protein 18
Chains: NV, NW
Length: 432 amino acids
Theoretical weight: 47.46 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9BV38 (Residues: 1-432; Coverage: 100%)
Gene name: WDR18
Pfam:
WD repeat-containing protein 18 in PDB entry 8fl2, assembly 1, front view.
WD repeat-containing protein 18 in PDB entry 8fl2, assembly 1, side view.
WD repeat-containing protein 18 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Proline-, glutamic acid- and leucine-rich protein 1
Chains: NX, NY
Length: 1130 amino acids
Theoretical weight: 119.79 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q8IZL8 (Residues: 1-1130; Coverage: 100%)
Gene names: HMX3, MNAR, PELP1
Pfam:
Proline-, glutamic acid- and leucine-rich protein 1 in PDB entry 8fl2, assembly 1, front view.
Proline-, glutamic acid- and leucine-rich protein 1 in PDB entry 8fl2, assembly 1, side view.
Proline-, glutamic acid- and leucine-rich protein 1 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Coiled-coil domain-containing protein 86
Chain: NZ
Length: 360 amino acids
Theoretical weight: 40.31 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9H6F5 (Residues: 1-360; Coverage: 100%)
Gene names: CCDC86, CYCLON
Pfam: Cgr1 family
Coiled-coil domain-containing protein 86 in PDB entry 8fl2, assembly 1, front view.
Coiled-coil domain-containing protein 86 in PDB entry 8fl2, assembly 1, side view.
Coiled-coil domain-containing protein 86 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL4
Chain: SA
Length: 427 amino acids
Theoretical weight: 47.8 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P36578 (Residues: 1-427; Coverage: 100%)
Gene names: RPL1, RPL4
Pfam:
Large ribosomal subunit protein uL4 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL4 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL4 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL18
Chain: SB
Length: 297 amino acids
Theoretical weight: 34.43 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P46777 (Residues: 1-297; Coverage: 100%)
Gene names: MSTP030, RPL5
Pfam:
Large ribosomal subunit protein uL18 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL18 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL18 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL6
Chain: SC
Length: 288 amino acids
Theoretical weight: 32.81 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q02878 (Residues: 1-288; Coverage: 100%)
Gene names: RPL6, TXREB1
Pfam:
Large ribosomal subunit protein eL6 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL6 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL6 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL30
Chain: SD
Length: 248 amino acids
Theoretical weight: 29.29 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P18124 (Residues: 1-248; Coverage: 100%)
Gene name: RPL7
Pfam:
Large ribosomal subunit protein uL30 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL30 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL30 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL8
Chain: SE
Length: 266 amino acids
Theoretical weight: 30.06 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62424 (Residues: 1-266; Coverage: 100%)
Gene names: RPL7A, SURF-3, SURF3
Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Large ribosomal subunit protein eL8 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein eL8 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein eL8 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL2
Chain: SF
Length: 257 amino acids
Theoretical weight: 28.09 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62917 (Residues: 1-257; Coverage: 100%)
Gene name: RPL8
Pfam:
Large ribosomal subunit protein uL2 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL2 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL2 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL6
Chain: SG
Length: 192 amino acids
Theoretical weight: 21.9 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P32969 (Residues: 1-192; Coverage: 100%)
Gene names: OK/SW-cl.103, RPL9, RPL9P7, RPL9P8, RPL9P9
Pfam: Ribosomal protein L6
Large ribosomal subunit protein uL6 in PDB entry 8fl2, assembly 1, front view.
Large ribosomal subunit protein uL6 in PDB entry 8fl2, assembly 1, side view.
Large ribosomal subunit protein uL6 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

MKI67 FHA domain-interacting nucleolar phosphoprotein
Chain: SH
Length: 293 amino acids
Theoretical weight: 34.29 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9BYG3 (Residues: 1-293; Coverage: 100%)
Gene names: MKI67IP, NIFK, NOPP34
Pfam:
MKI67 FHA domain-interacting nucleolar phosphoprotein in PDB entry 8fl2, assembly 1, front view.
MKI67 FHA domain-interacting nucleolar phosphoprotein in PDB entry 8fl2, assembly 1, side view.
MKI67 FHA domain-interacting nucleolar phosphoprotein in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Ribosomal protein uL30-like
Chain: SI
Length: 255 amino acids
Theoretical weight: 29.73 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q6DKI1 (Residues: 1-255; Coverage: 100%)
Gene name: RPL7L1
Pfam:
Ribosomal protein uL30-like in PDB entry 8fl2, assembly 1, front view.
Ribosomal protein uL30-like in PDB entry 8fl2, assembly 1, side view.
Ribosomal protein uL30-like in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Eukaryotic translation initiation factor 6
Chain: SK
Length: 245 amino acids
Theoretical weight: 26.62 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P56537 (Residues: 1-245; Coverage: 100%)
Gene names: EIF3A, EIF6, ITGB4BP, OK/SW-cl.27
Pfam: eIF-6 family
Eukaryotic translation initiation factor 6 in PDB entry 8fl2, assembly 1, front view.
Eukaryotic translation initiation factor 6 in PDB entry 8fl2, assembly 1, side view.
Eukaryotic translation initiation factor 6 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Ribosomal L1 domain-containing protein 1
Chain: SL
Length: 490 amino acids
Theoretical weight: 55.09 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: O76021 (Residues: 1-490; Coverage: 100%)
Gene names: CATX11, CSIG, L12, PBK1, RSL1D1
Pfam: Ribosomal protein L1p/L10e family
Ribosomal L1 domain-containing protein 1 in PDB entry 8fl2, assembly 1, front view.
Ribosomal L1 domain-containing protein 1 in PDB entry 8fl2, assembly 1, side view.
Ribosomal L1 domain-containing protein 1 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Pescadillo homolog
Chain: SM
Length: 588 amino acids
Theoretical weight: 68.11 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: O00541 (Residues: 1-588; Coverage: 100%)
Gene name: PES1
Pfam:
Pescadillo homolog in PDB entry 8fl2, assembly 1, front view.
Pescadillo homolog in PDB entry 8fl2, assembly 1, side view.
Pescadillo homolog in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

mRNA turnover protein 4 homolog
Chain: SQ
Length: 239 amino acids
Theoretical weight: 27.6 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9UKD2 (Residues: 1-239; Coverage: 100%)
Gene names: C1orf33, MRT4, MRTO4
Pfam:
mRNA turnover protein 4 homolog in PDB entry 8fl2, assembly 1, front view.
mRNA turnover protein 4 homolog in PDB entry 8fl2, assembly 1, side view.
mRNA turnover protein 4 homolog in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

GTP-binding protein 4
Chain: SR
Length: 634 amino acids
Theoretical weight: 74.11 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9BZE4 (Residues: 1-634; Coverage: 100%)
Gene names: CRFG, GTPBP4, NOG1
Pfam:
GTP-binding protein 4 in PDB entry 8fl2, assembly 1, front view.
GTP-binding protein 4 in PDB entry 8fl2, assembly 1, side view.
GTP-binding protein 4 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

Probable ribosome biogenesis protein RLP24
Chain: SV
Length: 163 amino acids
Theoretical weight: 19.67 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9UHA3 (Residues: 1-163; Coverage: 100%)
Gene names: C15orf15, My024, RPL24L, RSL24D1
Pfam: Ribosomal protein L24e
Probable ribosome biogenesis protein RLP24 in PDB entry 8fl2, assembly 1, front view.
Probable ribosome biogenesis protein RLP24 in PDB entry 8fl2, assembly 1, side view.
Probable ribosome biogenesis protein RLP24 in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar proteins

RNA chain L1
Name: 5.8S ribosomal RNA
Representative chains: L1
Length: 157 nucleotides
Theoretical weight: 50.46 KDa
Rfam: 5.8S ribosomal RNA
5.8S ribosomal RNA in PDB entry 8fl2, assembly 1, front view.
5.8S ribosomal RNA in PDB entry 8fl2, assembly 1, side view.
5.8S ribosomal RNA in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar RNA

RNA chain L2
Name: ITS2 rRNA
Representative chains: L2
Length: 1167 nucleotides
Theoretical weight: 376.43 KDa
ITS2 rRNA in PDB entry 8fl2, assembly 1, front view.
ITS2 rRNA in PDB entry 8fl2, assembly 1, side view.
ITS2 rRNA in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar RNA

RNA chain L3
Name: 28S ribosomal RNA
Representative chains: L3
Length: 5070 nucleotides
Theoretical weight: 1641.2 KDa
Rfam: Eukaryotic large subunit ribosomal RNA
28S ribosomal RNA in PDB entry 8fl2, assembly 1, front view.
28S ribosomal RNA in PDB entry 8fl2, assembly 1, side view.
28S ribosomal RNA in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar RNA

RNA chain L4
Name: 5S ribosomal RNA
Representative chains: L4
Length: 121 nucleotides
Theoretical weight: 39 KDa
Rfam: 5S ribosomal RNA
5S ribosomal RNA in PDB entry 8fl2, assembly 1, front view.
5S ribosomal RNA in PDB entry 8fl2, assembly 1, side view.
5S ribosomal RNA in PDB entry 8fl2, assembly 1, top view.
Molecule details ›

Search similar RNA

Quick links