› 8hqx

X-ray diffraction
1.54Å resolution

The complex structure of COPI cargo sorting module with TAT-WDM peptide

Released:
DOI: 10.2210/pdb8hqx/pdb
PDB entry 8hqx coloured by chain, front view.
PDB entry 8hqx coloured by chain, side view.
PDB entry 8hqx coloured by chain, top view.
Source organisms:
Entry authors: Ma WF, Nan YN, Yang MR, Li YQ

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-242318 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Coatomer subunit beta' Chain: A
Molecule details ›
Chain: A
Length: 301 amino acids
Theoretical weight: 34.29 KDa
Source organism: Saccharomyces cerevisiae YJM789
Expression system: Escherichia coli
UniProt:
  • Canonical: P41811 (Residues: 1-301; Coverage: 34%)
Gene names: G2827, SEC27, YGL137W
Sequence domains: WD domain, G-beta repeat
TAT-WDM KxKxx motif Chain: B
Molecule details ›
Chain: B
Length: 6 amino acids
Theoretical weight: 679 Da
Source organism: Homo sapiens
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRF BEAMLINE BL19U1
Spacegroup: C2
Unit cell:
a: 81.863Å b: 50.831Å c: 72.643Å
α: 90° β: 93.97° γ: 90°
R-values:
R R work R free
0.225 0.224 0.239
Expression systems:
  • Escherichia coli
  • Not provided

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