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Wheat 80S ribosome stalled on AUG-Stop boron dependently with cycloheximide

Electron Microscopy
3.4Å resolution
PDB entry 8ipa coloured by chain, front view.
PDB entry 8ipa coloured by chain, side view.
PDB entry 8ipa coloured by chain, top view.
Source organisms:
Assembly composition:
hetero 80-mer (preferred)
Entry contents: 74 distinct polypeptide molecules
6 distinct RNA molecules

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Assemblies

Assembly 1 (preferred)
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Assembly Name: 30S ribosome subunit,40S ribosome subunit,60S ribosome subunit and RACK1 and RNA
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Multimeric state: hetero 80-mer
PDBe Complex ID: PDB-CPX-278899

Macromolecules

40S ribosomal protein S24
Chain: ba
Length: 137 amino acids
Theoretical weight: 15.74 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6PK86 (Residues: 1-137; Coverage: 100%)
Gene names: CFC21_088220, CFC21_088221
Pfam: Ribosomal protein S24e
40S ribosomal protein S24 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S24 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S24 in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein S8
Chain: ca
Length: 225 amino acids
Theoretical weight: 25.34 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6AYT7 (Residues: 1-225; Coverage: 100%)
Gene name: CFC21_017118
Pfam: Ribosomal protein S8e
40S ribosomal protein S8 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S8 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S8 in PDB entry 8ipa, assembly 1, top view.
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Plectin/eS10 N-terminal domain-containing protein
Chain: da
Length: 188 amino acids
Theoretical weight: 20.46 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5AUH7 (Residues: 1-188; Coverage: 100%)
Gene name: CFC21_017397
Pfam: Plectin/S10 domain
Plectin/eS10 N-terminal domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Plectin/eS10 N-terminal domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Plectin/eS10 N-terminal domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein S23
Chain: ga
Length: 142 amino acids
Theoretical weight: 15.7 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5FV77 (Residues: 1-142; Coverage: 100%)
Gene names: CFC21_036826, CFC21_036828, CFC21_037201, CFC21_042798, CFC21_048659, CFC21_068535, CFC21_080452
Pfam: Ribosomal protein S12/S23
40S ribosomal protein S23 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S23 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S23 in PDB entry 8ipa, assembly 1, top view.
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RACK1
Chain: ha
Length: 332 amino acids
Theoretical weight: 36.2 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5D4F5 (Residues: 1-332; Coverage: 100%)
Gene names: CFC21_040720, CFC21_047775, TRAES_3BF007900030CFD_c1
Pfam: WD domain, G-beta repeat
RACK1 in PDB entry 8ipa, assembly 1, front view.
RACK1 in PDB entry 8ipa, assembly 1, side view.
RACK1 in PDB entry 8ipa, assembly 1, top view.
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30S ribosomal protein S3, chloroplastic
Chain: ia
Length: 227 amino acids
Theoretical weight: 25.41 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q8L804 (Residues: 1-227; Coverage: 100%)
Pfam:
30S ribosomal protein S3, chloroplastic in PDB entry 8ipa, assembly 1, front view.
30S ribosomal protein S3, chloroplastic in PDB entry 8ipa, assembly 1, side view.
30S ribosomal protein S3, chloroplastic in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein S4
Chain: ja
Length: 265 amino acids
Theoretical weight: 30.01 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A1D5SLI4 (Residues: 1-265; Coverage: 100%)
Gene names: CFC21_005863, CFC21_010690
Pfam:
40S ribosomal protein S4 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S4 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S4 in PDB entry 8ipa, assembly 1, top view.
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Small ribosomal subunit protein uS7c
Chain: ka
Length: 200 amino acids
Theoretical weight: 22.35 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5D067 (Residues: 1-200; Coverage: 100%)
Gene names: CFC21_039914, TRAES_3BF058200010CFD_c1
Pfam: Ribosomal protein S7p/S5e
Small ribosomal subunit protein uS7c in PDB entry 8ipa, assembly 1, front view.
Small ribosomal subunit protein uS7c in PDB entry 8ipa, assembly 1, side view.
Small ribosomal subunit protein uS7c in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein S16
Chain: la
Length: 149 amino acids
Theoretical weight: 16.87 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6HX49 (Residues: 1-149; Coverage: 100%)
Gene name: CFC21_052703
Pfam: Ribosomal protein S9/S16
40S ribosomal protein S16 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S16 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S16 in PDB entry 8ipa, assembly 1, top view.
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Small ribosomal subunit protein uS10 domain-containing protein
Chain: ma
Length: 127 amino acids
Theoretical weight: 14.13 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: U5HTD8 (Residues: 1-127; Coverage: 100%)
Gene names: CFC21_019225, CFC21_019228, CFC21_019231, CFC21_019235, CFC21_054980, CFC21_107037, rps20
Pfam: Ribosomal protein S10p/S20e
Small ribosomal subunit protein uS10 domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Small ribosomal subunit protein uS10 domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Small ribosomal subunit protein uS10 domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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30S ribosomal protein S11, chloroplastic
Chain: na
Length: 151 amino acids
Theoretical weight: 16.4 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6SS17 (Residues: 1-151; Coverage: 100%)
Gene name: CFC21_104703
Pfam: Ribosomal protein S11
30S ribosomal protein S11, chloroplastic in PDB entry 8ipa, assembly 1, front view.
30S ribosomal protein S11, chloroplastic in PDB entry 8ipa, assembly 1, side view.
30S ribosomal protein S11, chloroplastic in PDB entry 8ipa, assembly 1, top view.
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Putative ribosomal protein S18
Chain: oa
Length: 152 amino acids
Theoretical weight: 17.7 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q8L806 (Residues: 1-152; Coverage: 100%)
Gene names: CFC21_068138, CFC21_073936, CFC21_099813
Pfam: Ribosomal protein S13/S18
Putative ribosomal protein S18 in PDB entry 8ipa, assembly 1, front view.
Putative ribosomal protein S18 in PDB entry 8ipa, assembly 1, side view.
Putative ribosomal protein S18 in PDB entry 8ipa, assembly 1, top view.
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Small ribosomal subunit protein uS15 N-terminal domain-containing protein
Chain: pa
Length: 151 amino acids
Theoretical weight: 17.1 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5XUU9 (Residues: 1-151; Coverage: 100%)
Pfam:
Small ribosomal subunit protein uS15 N-terminal domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Small ribosomal subunit protein uS15 N-terminal domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Small ribosomal subunit protein uS15 N-terminal domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein S17
Chain: qa
Length: 143 amino acids
Theoretical weight: 16.52 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B5YWZ3 (Residues: 1-143; Coverage: 100%)
Gene name: CFC21_006450
Pfam: Ribosomal S17
40S ribosomal protein S17 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S17 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S17 in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein S19
Chain: ra
Length: 155 amino acids
Theoretical weight: 17.1 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5FWF5 (Residues: 1-155; Coverage: 100%)
Gene names: CFC21_065464, CFC21_076659
Pfam: Ribosomal protein S19e
40S ribosomal protein S19 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S19 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S19 in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein uS19
Chain: sa
Length: 154 amino acids
Theoretical weight: 17.42 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5ASA4 (Residues: 1-154; Coverage: 100%)
Gene names: CAMPLR22A2D_LOCUS2419, CFC21_016803, CFC21_029550
Pfam: Ribosomal protein S19
40S ribosomal protein uS19 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein uS19 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein uS19 in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein S25
Chain: ta
Length: 108 amino acids
Theoretical weight: 12.09 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5EP45 (Residues: 1-108; Coverage: 100%)
Gene names: CFC21_009979, CFC21_056005, CFC21_056010, CFC21_056015
Pfam: S25 ribosomal protein
40S ribosomal protein S25 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S25 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S25 in PDB entry 8ipa, assembly 1, top view.
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S28 ribosomal protein
Chain: ua
Length: 86 amino acids
Theoretical weight: 9.82 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q7X9K4 (Residues: 1-86; Coverage: 100%)
Pfam: Ribosomal protein S28e
S28 ribosomal protein in PDB entry 8ipa, assembly 1, front view.
S28 ribosomal protein in PDB entry 8ipa, assembly 1, side view.
S28 ribosomal protein in PDB entry 8ipa, assembly 1, top view.
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Small ribosomal subunit protein uS8c
Chain: va
Length: 129 amino acids
Theoretical weight: 14.92 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A077RZD1 (Residues: 1-129; Coverage: 100%)
Gene names: CFC21_034863, CFC21_040826, CFC21_046784, TRAES_3BF007400090CFD_c1
Pfam: Ribosomal protein S8
Small ribosomal subunit protein uS8c in PDB entry 8ipa, assembly 1, front view.
Small ribosomal subunit protein uS8c in PDB entry 8ipa, assembly 1, side view.
Small ribosomal subunit protein uS8c in PDB entry 8ipa, assembly 1, top view.
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Small ribosomal subunit protein uS14
Chain: wa
Length: 56 amino acids
Theoretical weight: 6.39 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5I7K3 (Residues: 1-56; Coverage: 100%)
Gene name: RPS29
Pfam: Ribosomal protein S14p/S29e
40S ribosomal protein S29 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S29 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S29 in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein S27
Chain: xa
Length: 86 amino acids
Theoretical weight: 9.58 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A341UET3 (Residues: 5-90; Coverage: 96%)
Gene names: CFC21_053114, CFC21_060788
Pfam: Ribosomal protein S27
40S ribosomal protein S27 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S27 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S27 in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein S30
Chain: ya
Length: 62 amino acids
Theoretical weight: 6.93 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6S9M7 (Residues: 1-62; Coverage: 100%)
Gene name: CFC21_101292
Pfam: Ribosomal protein S30
40S ribosomal protein S30 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S30 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S30 in PDB entry 8ipa, assembly 1, top view.
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Small ribosomal subunit protein uS2
Chain: za
Length: 308 amino acids
Theoretical weight: 33.3 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5E2W7 (Residues: 1-308; Coverage: 100%)
Gene name: CFC21_058947
Pfam: Ribosomal protein S2
Small ribosomal subunit protein uS2 in PDB entry 8ipa, assembly 1, front view.
Small ribosomal subunit protein uS2 in PDB entry 8ipa, assembly 1, side view.
Small ribosomal subunit protein uS2 in PDB entry 8ipa, assembly 1, top view.
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Small ribosomal subunit protein eS1
Chain: bb
Length: 263 amino acids
Theoretical weight: 30.04 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6IU74 (Residues: 1-263; Coverage: 100%)
Gene name: CFC21_058573
Pfam: Ribosomal S3Ae family
Small ribosomal subunit protein eS1 in PDB entry 8ipa, assembly 1, front view.
Small ribosomal subunit protein eS1 in PDB entry 8ipa, assembly 1, side view.
Small ribosomal subunit protein eS1 in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein S21
Chain: cb
Length: 82 amino acids
Theoretical weight: 9.19 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5EL62 (Residues: 1-82; Coverage: 100%)
Gene names: CFC21_052197, CFC21_061690
Pfam: Ribosomal protein S21e
40S ribosomal protein S21 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S21 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S21 in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein S26
Chain: db
Length: 156 amino acids
Theoretical weight: 16.58 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6LWE1 (Residues: 1-156; Coverage: 100%)
Gene name: CFC21_074379
Pfam: Ribosomal protein S26e
40S ribosomal protein S26 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S26 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S26 in PDB entry 8ipa, assembly 1, top view.
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30S ribosomal protein S4, chloroplastic
Chain: eb
Length: 195 amino acids
Theoretical weight: 22.53 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5FPA7 (Residues: 1-195; Coverage: 100%)
Gene names: CFC21_011030, CFC21_064815, CFC21_070616
Pfam:
30S ribosomal protein S4, chloroplastic in PDB entry 8ipa, assembly 1, front view.
30S ribosomal protein S4, chloroplastic in PDB entry 8ipa, assembly 1, side view.
30S ribosomal protein S4, chloroplastic in PDB entry 8ipa, assembly 1, top view.
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S5 DRBM domain-containing protein
Chain: fb
Length: 274 amino acids
Theoretical weight: 30 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6LVN2 (Residues: 1-274; Coverage: 100%)
Gene name: CFC21_074258
Pfam:
S5 DRBM domain-containing protein in PDB entry 8ipa, assembly 1, front view.
S5 DRBM domain-containing protein in PDB entry 8ipa, assembly 1, side view.
S5 DRBM domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein S6
Chain: gb
Length: 250 amino acids
Theoretical weight: 28.49 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A2X0SLI3 (Residues: 1-250; Coverage: 100%)
Gene names: CAMPLR22A2D_LOCUS1521, CFC21_015985, CFC21_028704
Pfam: Ribosomal protein S6e
40S ribosomal protein S6 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S6 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S6 in PDB entry 8ipa, assembly 1, top view.
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40S ribosomal protein S7
Chain: hb
Length: 192 amino acids
Theoretical weight: 22.3 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5I7K2 (Residues: 1-192; Coverage: 100%)
Gene names: CFC21_051939, CFC21_057885
Pfam: Ribosomal protein S7e
40S ribosomal protein S7 in PDB entry 8ipa, assembly 1, front view.
40S ribosomal protein S7 in PDB entry 8ipa, assembly 1, side view.
40S ribosomal protein S7 in PDB entry 8ipa, assembly 1, top view.
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Small ribosomal subunit protein uS17 N-terminal domain-containing protein
Chain: ib
Length: 159 amino acids
Theoretical weight: 17.84 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5BFB7 (Residues: 1-159; Coverage: 100%)
Gene names: CFC21_025034, CFC21_031339
Pfam:
Small ribosomal subunit protein uS17 N-terminal domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Small ribosomal subunit protein uS17 N-terminal domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Small ribosomal subunit protein uS17 N-terminal domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L7a
Chain: AA
Length: 258 amino acids
Theoretical weight: 29.41 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6RED0 (Residues: 1-258; Coverage: 100%)
Gene name: CFC21_097640
Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
60S ribosomal protein L7a in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L7a in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L7a in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L21
Chain: BA
Length: 164 amino acids
Theoretical weight: 18.72 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: F4YWL9 (Residues: 1-164; Coverage: 100%)
Gene names: CFC21_068953, RPL21
Pfam: Ribosomal protein L21e
60S ribosomal protein L21 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L21 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L21 in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L27
Chain: CA
Length: 137 amino acids
Theoretical weight: 15.62 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A341XZK6 (Residues: 1-137; Coverage: 100%)
Gene name: CFC21_098384
Pfam:
60S ribosomal protein L27 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L27 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L27 in PDB entry 8ipa, assembly 1, top view.
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Large ribosomal subunit protein uL2 C-terminal domain-containing protein
Chain: DA
Length: 261 amino acids
Theoretical weight: 28.25 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5ECL2 (Residues: 1-261; Coverage: 100%)
Gene names: CFC21_052694, CFC21_057232, CFC21_061205, CFC21_064588, CFC21_070369, CFC21_076331
Pfam:
Large ribosomal subunit protein uL2 C-terminal domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Large ribosomal subunit protein uL2 C-terminal domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Large ribosomal subunit protein uL2 C-terminal domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L11
Chain: EA
Length: 180 amino acids
Theoretical weight: 20.73 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B5XX39 (Residues: 1-180; Coverage: 100%)
Pfam:
60S ribosomal protein L11 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L11 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L11 in PDB entry 8ipa, assembly 1, top view.
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Large ribosomal subunit protein uL6 alpha-beta domain-containing protein
Chain: FA
Length: 189 amino acids
Theoretical weight: 21.33 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5I5G5 (Residues: 1-189; Coverage: 100%)
Gene names: CFC21_033307, CFC21_038784, CFC21_095138, TRAES_3BF060500370CFD_c1
Pfam: Ribosomal protein L6
Large ribosomal subunit protein uL6 alpha-beta domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Large ribosomal subunit protein uL6 alpha-beta domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Large ribosomal subunit protein uL6 alpha-beta domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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Ribosomal protein L17
Chain: GA
Length: 140 amino acids
Theoretical weight: 15.04 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5I7K4 (Residues: 1-140; Coverage: 100%)
Gene names: CFC21_006360, CFC21_011199, CFC21_085267, CFC21_090119
Pfam: Ribosomal protein L14p/L23e
Ribosomal protein L17 in PDB entry 8ipa, assembly 1, front view.
Ribosomal protein L17 in PDB entry 8ipa, assembly 1, side view.
Ribosomal protein L17 in PDB entry 8ipa, assembly 1, top view.
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Ribosomal protein L15
Chain: HA
Length: 204 amino acids
Theoretical weight: 24.49 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5FEX7 (Residues: 1-204; Coverage: 100%)
Gene names: CAMPLR22A2D_LOCUS2234, CFC21_029414, CFC21_065333, CFC21_077061
Pfam: Ribosomal L15
Ribosomal protein L15 in PDB entry 8ipa, assembly 1, front view.
Ribosomal protein L15 in PDB entry 8ipa, assembly 1, side view.
Ribosomal protein L15 in PDB entry 8ipa, assembly 1, top view.
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Large ribosomal subunit protein uL15/eL18 domain-containing protein
Chain: IA
Length: 145 amino acids
Theoretical weight: 16.05 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6DCS5 (Residues: 1-145; Coverage: 100%)
Gene name: CFC21_028780
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Large ribosomal subunit protein uL15/eL18 domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Large ribosomal subunit protein uL15/eL18 domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Large ribosomal subunit protein uL15/eL18 domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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Large ribosomal subunit protein uL15/eL18 domain-containing protein
Chain: JA
Length: 187 amino acids
Theoretical weight: 21.29 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6ATQ1 (Residues: 1-187; Coverage: 100%)
Gene name: CFC21_015448
Pfam: Ribosomal protein 60S L18 and 50S L18e
Large ribosomal subunit protein uL15/eL18 domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Large ribosomal subunit protein uL15/eL18 domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Large ribosomal subunit protein uL15/eL18 domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein
Chain: KA
Length: 301 amino acids
Theoretical weight: 34.49 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5BZZ2 (Residues: 1-301; Coverage: 100%)
Gene names: CFC21_017319, CFC21_030053
Pfam:
Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Large ribosomal subunit protein uL18 C-terminal eukaryotes domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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Ribosomal protein L19
Chain: LA
Length: 213 amino acids
Theoretical weight: 24.69 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6DA12 (Residues: 1-213; Coverage: 100%)
Gene names: CFC21_015301, CFC21_027941
Pfam: Ribosomal protein L19e
Ribosomal protein L19 in PDB entry 8ipa, assembly 1, front view.
Ribosomal protein L19 in PDB entry 8ipa, assembly 1, side view.
Ribosomal protein L19 in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein uL22
Chain: MA
Length: 170 amino acids
Theoretical weight: 19.53 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5FSM8 (Residues: 1-170; Coverage: 100%)
Gene names: CFC21_071208, CFC21_077189
Pfam: Ribosomal protein L22p/L17e
60S ribosomal protein uL22 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein uL22 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein uL22 in PDB entry 8ipa, assembly 1, top view.
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Large ribosomal subunit protein uL23 N-terminal domain-containing protein
Chain: NA
Length: 152 amino acids
Theoretical weight: 16.92 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A1D5UQZ5 (Residues: 1-152; Coverage: 100%)
Gene names: CAMPLR22A2D_LOCUS3567, CFC21_010645, CFC21_024362, CFC21_030666
Pfam:
Large ribosomal subunit protein uL23 N-terminal domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Large ribosomal subunit protein uL23 N-terminal domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Large ribosomal subunit protein uL23 N-terminal domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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TRASH domain-containing protein
Chain: OA
Length: 162 amino acids
Theoretical weight: 18.45 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5CDW4 (Residues: 1-162; Coverage: 100%)
Gene name: CFC21_042648
Pfam: Ribosomal protein L24e
TRASH domain-containing protein in PDB entry 8ipa, assembly 1, front view.
TRASH domain-containing protein in PDB entry 8ipa, assembly 1, side view.
TRASH domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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KOW domain-containing protein
Chain: PA
Length: 157 amino acids
Theoretical weight: 17.59 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6GQI2 (Residues: 1-157; Coverage: 100%)
Gene name: CFC21_046528
Pfam:
KOW domain-containing protein in PDB entry 8ipa, assembly 1, front view.
KOW domain-containing protein in PDB entry 8ipa, assembly 1, side view.
KOW domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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Large ribosomal subunit protein eL28
Chain: QA
Length: 147 amino acids
Theoretical weight: 16.61 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B5ZZN9 (Residues: 1-147; Coverage: 100%)
Pfam: Ribosomal L28e protein family
Large ribosomal subunit protein eL28 in PDB entry 8ipa, assembly 1, front view.
Large ribosomal subunit protein eL28 in PDB entry 8ipa, assembly 1, side view.
Large ribosomal subunit protein eL28 in PDB entry 8ipa, assembly 1, top view.
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Large ribosomal subunit protein eL30
Chain: RA
Length: 112 amino acids
Theoretical weight: 12.37 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5I7K9 (Residues: 1-112; Coverage: 100%)
Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L31
Chain: SA
Length: 123 amino acids
Theoretical weight: 14.15 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5G990 (Residues: 1-123; Coverage: 100%)
Gene names: CFC21_084218, CFC21_093418
Pfam: Ribosomal protein L31e
60S ribosomal protein L31 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L31 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L31 in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L32
Chain: TA
Length: 133 amino acids
Theoretical weight: 15.74 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6SDD9 (Residues: 1-133; Coverage: 100%)
Gene name: CFC21_102549
Pfam: Ribosomal protein L32
60S ribosomal protein L32 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L32 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L32 in PDB entry 8ipa, assembly 1, top view.
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Ribosomal protein L37
Chain: UA
Length: 93 amino acids
Theoretical weight: 10.77 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A1D6BC85 (Residues: 1-93; Coverage: 100%)
Gene names: CFC21_086135, CFC21_091005, CFC21_091010
Pfam: Ribosomal protein L37e
Ribosomal protein L37 in PDB entry 8ipa, assembly 1, front view.
Ribosomal protein L37 in PDB entry 8ipa, assembly 1, side view.
Ribosomal protein L37 in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L39
Chain: VA
Length: 76 amino acids
Theoretical weight: 9.44 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: M7ZU91 (Residues: 1-76; Coverage: 100%)
Gene name: TRIUR3_17747
Pfam: Ribosomal L39 protein
60S ribosomal protein L39 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L39 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L39 in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein eL42
Chain: WA
Length: 105 amino acids
Theoretical weight: 12.14 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5HX73 (Residues: 1-105; Coverage: 100%)
Gene names: CAMPLR22A2D_LOCUS2111, CFC21_023035, CFC21_066964, CFC21_067977, CFC21_072777, CFC21_073788, CFC21_078767, CFC21_079793, CFC21_099667, CFC21_099668, CFC21_110912
Pfam: Ribosomal protein L44
60S ribosomal protein eL42 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein eL42 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein eL42 in PDB entry 8ipa, assembly 1, top view.
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Large ribosomal subunit protein eL14 domain-containing protein
Chain: XA
Length: 135 amino acids
Theoretical weight: 15.49 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6DGT8 (Residues: 1-135; Coverage: 100%)
Gene name: CFC21_030928
Pfam: Ribosomal protein L14
Large ribosomal subunit protein eL14 domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Large ribosomal subunit protein eL14 domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Large ribosomal subunit protein eL14 domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L18a
Chain: YA
Length: 178 amino acids
Theoretical weight: 21.38 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: W5D7B8 (Residues: 1-178; Coverage: 100%)
Gene name: CFC21_041679
Pfam: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
60S ribosomal protein L18a in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L18a in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L18a in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L22
Chain: ZA
Length: 130 amino acids
Theoretical weight: 14.5 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6C0D4 (Residues: 1-130; Coverage: 100%)
Gene name: CFC21_021810
Pfam: Ribosomal L22e protein family
60S ribosomal protein L22 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L22 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L22 in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L36
Chain: AB
Length: 112 amino acids
Theoretical weight: 12.56 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5I7L5 (Residues: 1-112; Coverage: 100%)
Gene name: CFC21_064117
Pfam: Ribosomal protein L36e
60S ribosomal protein L36 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L36 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L36 in PDB entry 8ipa, assembly 1, top view.
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Large ribosomal subunit protein uL29
Chain: BB
Length: 124 amino acids
Theoretical weight: 14.4 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q8L805 (Residues: 1-124; Coverage: 100%)
Gene name: RPL35
Pfam: Ribosomal L29 protein
Large ribosomal subunit protein uL29 in PDB entry 8ipa, assembly 1, front view.
Large ribosomal subunit protein uL29 in PDB entry 8ipa, assembly 1, side view.
Large ribosomal subunit protein uL29 in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein uL30
Chain: CB
Length: 244 amino acids
Theoretical weight: 28.16 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6DM38 (Residues: 1-244; Coverage: 100%)
Gene name: CFC21_075603
Pfam:
60S ribosomal protein uL30 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein uL30 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein uL30 in PDB entry 8ipa, assembly 1, top view.
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Ribosomal protein L3-A2
Chain: DB
Length: 389 amino acids
Theoretical weight: 44.72 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q7X748 (Residues: 1-389; Coverage: 100%)
Gene names: CFC21_070698, RPL3, RPL3-A2, RPL3A-2
Pfam: Ribosomal protein L3
Ribosomal protein L3A-2 in PDB entry 8ipa, assembly 1, front view.
Ribosomal protein L3A-2 in PDB entry 8ipa, assembly 1, side view.
Ribosomal protein L3A-2 in PDB entry 8ipa, assembly 1, top view.
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Large ribosomal subunit protein uL4 C-terminal domain-containing protein
Chain: EB
Length: 404 amino acids
Theoretical weight: 44.29 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B5ZXX7 (Residues: 1-404; Coverage: 100%)
Gene name: CFC21_012388
Pfam:
Large ribosomal subunit protein uL4 C-terminal domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Large ribosomal subunit protein uL4 C-terminal domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Large ribosomal subunit protein uL4 C-terminal domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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Ribosomal protein L13a
Chain: FB
Length: 206 amino acids
Theoretical weight: 23.58 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: Q5I7L1 (Residues: 1-206; Coverage: 100%)
Pfam: Ribosomal protein L13
Ribosomal protein L13a in PDB entry 8ipa, assembly 1, front view.
Ribosomal protein L13a in PDB entry 8ipa, assembly 1, side view.
Ribosomal protein L13a in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L37a, expressed
Chain: GB
Length: 92 amino acids
Theoretical weight: 10.27 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: D8L9P6 (Residues: 1-92; Coverage: 100%)
Gene names: CFC21_098386, CFC21_109870, TAA_ctg0616b.00240.1, TRAES_3BF073800030CFD_c1
Pfam: Ribosomal L37ae protein family
60S ribosomal protein L37a, expressed in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L37a, expressed in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L37a, expressed in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein uL16
Chain: HB
Length: 217 amino acids
Theoretical weight: 24.52 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6HUM3 (Residues: 1-217; Coverage: 100%)
Gene name: CFC21_052842
Pfam: Ribosomal protein L16p/L10e
60S ribosomal protein uL16 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein uL16 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein uL16 in PDB entry 8ipa, assembly 1, top view.
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Small ribosomal subunit protein eS32
Chain: IB
Length: 25 amino acids
Theoretical weight: 3.45 KDa
Source organism: Oryza sativa
UniProt:
  • Canonical: P62125 (Residues: 1-25; Coverage: 100%)
Gene names: LOC_Os03g56878, OSJNBa0091J19.8, Os03g0781500, Os03g0781501, RPL41
Pfam: Ribosomal protein L41
Small ribosomal subunit protein eS32 in PDB entry 8ipa, assembly 1, front view.
Small ribosomal subunit protein eS32 in PDB entry 8ipa, assembly 1, side view.
Small ribosomal subunit protein eS32 in PDB entry 8ipa, assembly 1, top view.
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Ubiquitin-like domain-containing protein
Chain: JB
Length: 129 amino acids
Theoretical weight: 14.83 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A1D5XNC2 (Residues: 1-129; Coverage: 100%)
Gene names: CFC21_051579, CFC21_053842, CFC21_056000, CFC21_060038, CFC21_062406
Pfam:
Ubiquitin-like domain-containing protein in PDB entry 8ipa, assembly 1, front view.
Ubiquitin-like domain-containing protein in PDB entry 8ipa, assembly 1, side view.
Ubiquitin-like domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L13
Chain: KB
Length: 208 amino acids
Theoretical weight: 24.19 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6NJZ9 (Residues: 1-208; Coverage: 100%)
Gene name: CFC21_081845
Pfam: Ribosomal protein L13e
60S ribosomal protein L13 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L13 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L13 in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L6
Chain: LB
Length: 219 amino acids
Theoretical weight: 24.58 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6QGW3 (Residues: 14-232; Coverage: 94%)
Gene name: CFC21_092553
Pfam: Ribosomal protein L6e
60S ribosomal protein L6 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L6 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L6 in PDB entry 8ipa, assembly 1, top view.
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Ribosomal protein L35A
Chain: MB
Length: 112 amino acids
Theoretical weight: 12.7 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A0C4BK99 (Residues: 1-112; Coverage: 100%)
Gene name: CFC21_089636
Pfam: Ribosomal protein L35Ae
Ribosomal protein L35A in PDB entry 8ipa, assembly 1, front view.
Ribosomal protein L35A in PDB entry 8ipa, assembly 1, side view.
Ribosomal protein L35A in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L38
Chain: NB
Length: 69 amino acids
Theoretical weight: 8.07 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A1D5W6Q2 (Residues: 1-69; Coverage: 100%)
Gene names: CFC21_043473, CFC21_044750
Pfam: Ribosomal L38e protein family
60S ribosomal protein L38 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L38 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L38 in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L29
Chain: OB
Length: 60 amino acids
Theoretical weight: 6.99 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A1D5RRD3 (Residues: 1-60; Coverage: 100%)
Gene names: CFC21_007097, CFC21_011996
Pfam: Ribosomal L29e protein family
60S ribosomal protein L29 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L29 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L29 in PDB entry 8ipa, assembly 1, top view.
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60S ribosomal protein L34
Chain: PB
Length: 119 amino acids
Theoretical weight: 13.8 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: A0A3B6RFY8 (Residues: 1-119; Coverage: 100%)
Gene name: CFC21_098055
Pfam: Ribosomal protein L34e
60S ribosomal protein L34 in PDB entry 8ipa, assembly 1, front view.
60S ribosomal protein L34 in PDB entry 8ipa, assembly 1, side view.
60S ribosomal protein L34 in PDB entry 8ipa, assembly 1, top view.
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eRF1 domain-containing protein
Chain: bl
Length: 437 amino acids
Theoretical weight: 49.05 KDa
Source organism: Triticum aestivum
UniProt:
  • Canonical: I3NM28 (Residues: 1-437; Coverage: 100%)
Gene names: 4N5.2, CFC21_060346
Pfam:
eRF1 domain-containing protein in PDB entry 8ipa, assembly 1, front view.
eRF1 domain-containing protein in PDB entry 8ipa, assembly 1, side view.
eRF1 domain-containing protein in PDB entry 8ipa, assembly 1, top view.
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RNA chain aa
Name: 18S Ribosomal RNA
Representative chains: aa
Length: 1810 nucleotides
Theoretical weight: 583.61 KDa
Rfam: Eukaryotic small subunit ribosomal RNA
18S Ribosomal RNA in PDB entry 8ipa, assembly 1, front view.
18S Ribosomal RNA in PDB entry 8ipa, assembly 1, side view.
18S Ribosomal RNA in PDB entry 8ipa, assembly 1, top view.
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RNA chain RB
Name: 60S ribosomal RNA
Representative chains: RB
Length: 3386 nucleotides
Theoretical weight: 1095.66 KDa
Rfam: Eukaryotic large subunit ribosomal RNA
60S ribosomal RNA in PDB entry 8ipa, assembly 1, front view.
60S ribosomal RNA in PDB entry 8ipa, assembly 1, side view.
60S ribosomal RNA in PDB entry 8ipa, assembly 1, top view.
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RNA chain SB
Name: 5.8S ribosomal RNA
Representative chains: SB
Length: 160 nucleotides
Theoretical weight: 51.54 KDa
Rfam: 5.8S ribosomal RNA
5.8S ribosomal RNA in PDB entry 8ipa, assembly 1, front view.
5.8S ribosomal RNA in PDB entry 8ipa, assembly 1, side view.
5.8S ribosomal RNA in PDB entry 8ipa, assembly 1, top view.
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RNA chain TB
Name: 5S ribosomal RNA
Representative chains: TB
Length: 120 nucleotides
Theoretical weight: 38.72 KDa
Rfam: 5S ribosomal RNA
5S ribosomal RNA in PDB entry 8ipa, assembly 1, front view.
5S ribosomal RNA in PDB entry 8ipa, assembly 1, side view.
5S ribosomal RNA in PDB entry 8ipa, assembly 1, top view.
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RNA chain al
Name: Messenger RNA
Representative chains: al
Length: 7 nucleotides
Theoretical weight: 2.23 KDa
Messenger RNA in PDB entry 8ipa, assembly 1, front view.
Messenger RNA in PDB entry 8ipa, assembly 1, side view.
Messenger RNA in PDB entry 8ipa, assembly 1, top view.
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RNA chain cl
Name: tRNAi
Representative chains: cl
Length: 75 nucleotides
Theoretical weight: 24.45 KDa
Rfam: tRNA
tRNAi in PDB entry 8ipa, assembly 1, front view.
tRNAi in PDB entry 8ipa, assembly 1, side view.
tRNAi in PDB entry 8ipa, assembly 1, top view.
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