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Atomic structure of wheat ribosome reveals unique features of the plant ribosomes

Source organism: Triticum aestivum
Biochemical function: structural constituent of ribosome
Biological process: translation
Cellular component: ribonucleoprotein complex

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GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF00400
Domain description: WD domain, G-beta repeat
Occurring in:
  1. Mitogen-activated protein kinase
The deposited structure of PDB entry 8jiw contains 7 copies of Pfam domain PF00400 (WD domain, G-beta repeat) in Mitogen-activated protein kinase. Showing 7 copies in chain FA [auth Bg].

PF01479
Domain description: S4 domain
Occurring in:
  1. 40S ribosomal protein S4
  2. 30S ribosomal protein S4, chloroplastic
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF01479 (S4 domain) in 40S ribosomal protein S4. Showing 1 copy in chain E [auth BE].
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF01479 (S4 domain) in 30S ribosomal protein S4, chloroplastic. Showing 1 copy in chain I [auth BJ].

PF00318
Domain description: Ribosomal protein S2
Occurring in:
  1. Small ribosomal subunit protein uS2
The deposited structure of PDB entry 8jiw contains 2 copies of Pfam domain PF00318 (Ribosomal protein S2) in Small ribosomal subunit protein uS2. Showing 2 copies in chain B [auth BA].

PF05162
Domain description: Ribosomal protein L41
Occurring in:
  1. Small ribosomal subunit protein eS32
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF05162 (Ribosomal protein L41) in Small ribosomal subunit protein eS32. Showing 1 copy in chain U [auth Cn].

PF04758
Domain description: Ribosomal protein S30
Occurring in:
  1. 40S ribosomal protein S30
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF04758 (Ribosomal protein S30) in 40S ribosomal protein S30. Showing 1 copy in chain T [auth Be].

PF00253
Domain description: Ribosomal protein S14p/S29e
Occurring in:
  1. 40S ribosomal protein S29
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00253 (Ribosomal protein S14p/S29e) in 40S ribosomal protein S29. Showing 1 copy in chain EA [auth Bd].

PF01200
Domain description: Ribosomal protein S28e
Occurring in:
  1. 40S ribosomal protein S28
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF01200 (Ribosomal protein S28e) in 40S ribosomal protein S28. Showing 1 copy in chain DA [auth Bc].

PF01667
Domain description: Ribosomal protein S27
Occurring in:
  1. 40S ribosomal protein S27
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF01667 (Ribosomal protein S27) in 40S ribosomal protein S27. Showing 1 copy in chain S [auth Bb].

PF01283
Domain description: Ribosomal protein S26e
Occurring in:
  1. 40S ribosomal protein S26
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF01283 (Ribosomal protein S26e) in 40S ribosomal protein S26. Showing 1 copy in chain R [auth Ba].

PF03297
Domain description: S25 ribosomal protein
Occurring in:
  1. 40S ribosomal protein S25
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF03297 (S25 ribosomal protein) in 40S ribosomal protein S25. Showing 1 copy in chain GA [auth BZ].

PF01282
Domain description: Ribosomal protein S24e
Occurring in:
  1. 40S ribosomal protein S24
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF01282 (Ribosomal protein S24e) in 40S ribosomal protein S24. Showing 1 copy in chain Q [auth BY].

PF00164
Domain description: Ribosomal protein S12/S23
Occurring in:
  1. 40S ribosomal protein S23
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00164 (Ribosomal protein S12/S23) in 40S ribosomal protein S23. Showing 1 copy in chain P [auth BX].

PF00410
Domain description: Ribosomal protein S8
Occurring in:
  1. Small ribosomal subunit protein uS8c
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00410 (Ribosomal protein S8) in Small ribosomal subunit protein uS8c. Showing 1 copy in chain O [auth BW].

PF01249
Domain description: Ribosomal protein S21e
Occurring in:
  1. 40S ribosomal protein S21
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF01249 (Ribosomal protein S21e ) in 40S ribosomal protein S21. Showing 1 copy in chain N [auth BV].

PF00338
Domain description: Ribosomal protein S10p/S20e
Occurring in:
  1. Small ribosomal subunit protein uS10 domain-containing protein
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00338 (Ribosomal protein S10p/S20e) in Small ribosomal subunit protein uS10 domain-containing protein. Showing 1 copy in chain CA [auth BU].

PF01090
Domain description: Ribosomal protein S19e
Occurring in:
  1. 40S ribosomal protein S19
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF01090 (Ribosomal protein S19e) in 40S ribosomal protein S19. Showing 1 copy in chain BA [auth BT].

PF00416
Domain description: Ribosomal protein S13/S18
Occurring in:
  1. 40S ribosomal protein S18
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00416 (Ribosomal protein S13/S18) in 40S ribosomal protein S18. Showing 1 copy in chain AA [auth BS].

PF00833
Domain description: Ribosomal S17
Occurring in:
  1. 40S ribosomal protein S17
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00833 (Ribosomal S17) in 40S ribosomal protein S17. Showing 1 copy in chain M [auth BR].

PF00380
Domain description: Ribosomal protein S9/S16
Occurring in:
  1. 40S ribosomal protein S16
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00380 (Ribosomal protein S9/S16) in 40S ribosomal protein S16. Showing 1 copy in chain Z [auth BQ].

PF00203
Domain description: Ribosomal protein S19
Occurring in:
  1. 40S ribosomal protein S15
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00203 (Ribosomal protein S19) in 40S ribosomal protein S15. Showing 1 copy in chain Y [auth BP].

PF00411
Domain description: Ribosomal protein S11
Occurring in:
  1. 30S ribosomal protein S11, chloroplastic
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00411 (Ribosomal protein S11) in 30S ribosomal protein S11, chloroplastic. Showing 1 copy in chain L [auth BO].

PF00312
Domain description: Ribosomal protein S15
Occurring in:
  1. Small ribosomal subunit protein uS15 N-terminal domain-containing protein
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00312 (Ribosomal protein S15) in Small ribosomal subunit protein uS15 N-terminal domain-containing protein. Showing 1 copy in chain K [auth BN].

PF08069
Domain description: Ribosomal S13/S15 N-terminal domain
Occurring in:
  1. Small ribosomal subunit protein uS15 N-terminal domain-containing protein
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF08069 (Ribosomal S13/S15 N-terminal domain) in Small ribosomal subunit protein uS15 N-terminal domain-containing protein. Showing 1 copy in chain K [auth BN].

PF00366
Domain description: Ribosomal protein S17
Occurring in:
  1. Small ribosomal subunit protein uS17 N-terminal domain-containing protein
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00366 (Ribosomal protein S17) in Small ribosomal subunit protein uS17 N-terminal domain-containing protein. Showing 1 copy in chain J [auth BL].

PF16205
Domain description: Ribosomal_S17 N-terminal
Occurring in:
  1. Small ribosomal subunit protein uS17 N-terminal domain-containing protein
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF16205 (Ribosomal_S17 N-terminal) in Small ribosomal subunit protein uS17 N-terminal domain-containing protein. Showing 1 copy in chain J [auth BL].

PF03501
Domain description: Plectin/S10 domain
Occurring in:
  1. Plectin/eS10 N-terminal domain-containing protein
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF03501 (Plectin/S10 domain) in Plectin/eS10 N-terminal domain-containing protein. Showing 1 copy in chain X [auth BK].

PF00163
Domain description: Ribosomal protein S4/S9 N-terminal domain
Occurring in:
  1. 30S ribosomal protein S4, chloroplastic
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00163 (Ribosomal protein S4/S9 N-terminal domain) in 30S ribosomal protein S4, chloroplastic. Showing 1 copy in chain I [auth BJ].

PF01201
Domain description: Ribosomal protein S8e
Occurring in:
  1. 40S ribosomal protein S8
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF01201 (Ribosomal protein S8e) in 40S ribosomal protein S8. Showing 1 copy in chain H [auth BI].

PF01251
Domain description: Ribosomal protein S7e
Occurring in:
  1. 40S ribosomal protein S7
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF01251 (Ribosomal protein S7e) in 40S ribosomal protein S7. Showing 1 copy in chain G [auth BH].

PF01092
Domain description: Ribosomal protein S6e
Occurring in:
  1. 40S ribosomal protein S6
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF01092 (Ribosomal protein S6e) in 40S ribosomal protein S6. Showing 1 copy in chain F [auth BG].

PF00177
Domain description: Ribosomal protein S7p/S5e
Occurring in:
  1. Small ribosomal subunit protein uS7c
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00177 (Ribosomal protein S7p/S5e) in Small ribosomal subunit protein uS7c. Showing 1 copy in chain W [auth BF].

PF16121
Domain description: 40S ribosomal protein S4 C-terminus
Occurring in:
  1. 40S ribosomal protein S4
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF16121 (40S ribosomal protein S4 C-terminus) in 40S ribosomal protein S4. Showing 1 copy in chain E [auth BE].

PF00467
Domain description: KOW motif
Occurring in:
  1. 40S ribosomal protein S4
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00467 (KOW motif) in 40S ribosomal protein S4. Showing 1 copy in chain E [auth BE].

PF00900
Domain description: Ribosomal family S4e
Occurring in:
  1. 40S ribosomal protein S4
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00900 (Ribosomal family S4e) in 40S ribosomal protein S4. Showing 1 copy in chain E [auth BE].

PF08071
Domain description: RS4NT (NUC023) domain
Occurring in:
  1. 40S ribosomal protein S4
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF08071 (RS4NT (NUC023) domain) in 40S ribosomal protein S4. Showing 1 copy in chain E [auth BE].

PF00189
Domain description: Ribosomal protein S3, C-terminal domain
Occurring in:
  1. 30S ribosomal protein S3, chloroplastic
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00189 (Ribosomal protein S3, C-terminal domain) in 30S ribosomal protein S3, chloroplastic. Showing 1 copy in chain V [auth BD].

PF07650
Domain description: KH domain
Occurring in:
  1. 30S ribosomal protein S3, chloroplastic
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF07650 (KH domain) in 30S ribosomal protein S3, chloroplastic. Showing 1 copy in chain V [auth BD].

PF03719
Domain description: Ribosomal protein S5, C-terminal domain
Occurring in:
  1. S5 DRBM domain-containing protein
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF03719 (Ribosomal protein S5, C-terminal domain) in S5 DRBM domain-containing protein. Showing 1 copy in chain D [auth BC].

PF00333
Domain description: Ribosomal protein S5, N-terminal domain
Occurring in:
  1. S5 DRBM domain-containing protein
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF00333 (Ribosomal protein S5, N-terminal domain) in S5 DRBM domain-containing protein. Showing 1 copy in chain D [auth BC].

PF01015
Domain description: Ribosomal S3Ae family
Occurring in:
  1. Small ribosomal subunit protein eS1
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF01015 (Ribosomal S3Ae family) in Small ribosomal subunit protein eS1. Showing 1 copy in chain C [auth BB].

PF16122
Domain description: 40S ribosomal protein SA C-terminus
Occurring in:
  1. Small ribosomal subunit protein uS2
The deposited structure of PDB entry 8jiw contains 1 copy of Pfam domain PF16122 (40S ribosomal protein SA C-terminus) in Small ribosomal subunit protein uS2. Showing 1 copy in chain B [auth BA].

Rfam RNA family (Rfam)
RF01960
Domain description: Eukaryotic small subunit ribosomal RNA
Occurring in:
  1. 18S Ribosomal RNA
The deposited structure of PDB entry 8jiw contains 1 copy of Rfam domain RF01960 (Eukaryotic small subunit ribosomal RNA) in 18S Ribosomal RNA. Showing 1 copy in chain A [auth Ad].

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