› › Structure analysis

60S ribosomal subunit bound to the E3-UFM1 complex - state 2 (native)

Electron Microscopy
3.3Å resolution
PDB entry 8oj0 coloured by chain, front view.
PDB entry 8oj0 coloured by chain, side view.
PDB entry 8oj0 coloured by chain, top view.
Source organisms:
Assembly composition:
hetero 53-mer (preferred)
Entry contents: 50 distinct polypeptide molecules
3 distinct RNA molecules

Quick links

Assemblies

Assembly 1 (preferred)
Download    3D Visualisation
Multimeric state: hetero 53-mer
Accessible surface area: 753909.54 Å2
Buried surface area: 446049.09 Å2
Dissociation area: 1,402.68 Å2
Dissociation energy (ΔGdiss): 3.87 kcal/mol
Dissociation entropy (TΔSdiss): 16.08 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-240072

Macromolecules

Protein transport protein Sec61 subunit alpha isoform 1
Chain: 1
Length: 476 amino acids
Theoretical weight: 52.28 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P38377 (Residues: 1-476; Coverage: 100%)
Gene name: SEC61A1
Pfam:
Protein transport protein Sec61 subunit alpha isoform 1 in PDB entry 8oj0, assembly 1, front view.
Protein transport protein Sec61 subunit alpha isoform 1 in PDB entry 8oj0, assembly 1, side view.
Protein transport protein Sec61 subunit alpha isoform 1 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Protein transport protein Sec61 subunit gamma
Chain: 2
Length: 68 amino acids
Theoretical weight: 7.75 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P60059 (Residues: 1-68; Coverage: 100%)
Gene name: SEC61G
Pfam: SecE/Sec61-gamma subunits of protein translocation complex
Protein transport protein Sec61 subunit gamma in PDB entry 8oj0, assembly 1, front view.
Protein transport protein Sec61 subunit gamma in PDB entry 8oj0, assembly 1, side view.
Protein transport protein Sec61 subunit gamma in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Protein transport protein Sec61 subunit beta
Chain: 3
Length: 96 amino acids
Theoretical weight: 9.99 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P60468 (Residues: 1-96; Coverage: 100%)
Gene name: SEC61B
Pfam: Sec61beta family
Protein transport protein Sec61 subunit beta in PDB entry 8oj0, assembly 1, front view.
Protein transport protein Sec61 subunit beta in PDB entry 8oj0, assembly 1, side view.
Protein transport protein Sec61 subunit beta in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

E3 UFM1-protein ligase 1
Chain: A
Length: 794 amino acids
Theoretical weight: 89.72 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt:
  • Canonical: O94874 (Residues: 1-794; Coverage: 100%)
Gene names: KIAA0776, MAXER, NLBP, RCAD, UFL1
Pfam: E3 UFM1-protein ligase 1
E3 UFM1-protein ligase 1 in PDB entry 8oj0, assembly 1, front view.
E3 UFM1-protein ligase 1 in PDB entry 8oj0, assembly 1, side view.
E3 UFM1-protein ligase 1 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

CDK5 regulatory subunit-associated protein 3
Chain: B
Length: 506 amino acids
Theoretical weight: 56.98 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q96JB5 (Residues: 1-506; Coverage: 100%)
Gene names: CDK5RAP3, IC53, LZAP, MSTP016, OK/SW-cl.114, PP1553
Pfam: CDK5 regulatory subunit-associated protein 3
CDK5 regulatory subunit-associated protein 3 in PDB entry 8oj0, assembly 1, front view.
CDK5 regulatory subunit-associated protein 3 in PDB entry 8oj0, assembly 1, side view.
CDK5 regulatory subunit-associated protein 3 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

DDRGK domain-containing protein 1
Chain: C
Length: 314 amino acids
Theoretical weight: 35.66 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q96HY6 (Residues: 1-314; Coverage: 100%)
Gene names: C20orf116, DDRGK1, UFBP1
Pfam: DDRGK domain
DDRGK domain-containing protein 1 in PDB entry 8oj0, assembly 1, front view.
DDRGK domain-containing protein 1 in PDB entry 8oj0, assembly 1, side view.
DDRGK domain-containing protein 1 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Ubiquitin-fold modifier 1
Chain: D
Length: 85 amino acids
Theoretical weight: 9.13 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P61960 (Residues: 1-85; Coverage: 100%)
Gene names: BM-002, C13orf20, UFM1
Pfam: Ubiquitin fold modifier 1 protein
Ubiquitin-fold modifier 1 in PDB entry 8oj0, assembly 1, front view.
Ubiquitin-fold modifier 1 in PDB entry 8oj0, assembly 1, side view.
Ubiquitin-fold modifier 1 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Eukaryotic translation initiation factor 6
Chain: K
Length: 245 amino acids
Theoretical weight: 26.62 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P56537 (Residues: 1-245; Coverage: 100%)
Gene names: EIF3A, EIF6, ITGB4BP, OK/SW-cl.27
Pfam: eIF-6 family
Eukaryotic translation initiation factor 6 in PDB entry 8oj0, assembly 1, front view.
Eukaryotic translation initiation factor 6 in PDB entry 8oj0, assembly 1, side view.
Eukaryotic translation initiation factor 6 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL2
Chain: LA
Length: 257 amino acids
Theoretical weight: 28.09 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62917 (Residues: 1-257; Coverage: 100%)
Gene name: RPL8
Pfam:
Large ribosomal subunit protein uL2 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL2 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL2 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL3
Chain: LB
Length: 403 amino acids
Theoretical weight: 46.21 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P39023 (Residues: 1-403; Coverage: 100%)
Gene names: OK/SW-cl.32, RPL3
Pfam: Ribosomal protein L3
Large ribosomal subunit protein uL3 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL3 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL3 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL4
Chain: LC
Length: 427 amino acids
Theoretical weight: 47.8 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P36578 (Residues: 1-427; Coverage: 100%)
Gene names: RPL1, RPL4
Pfam:
Large ribosomal subunit protein uL4 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL4 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL4 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL18
Chain: LD
Length: 297 amino acids
Theoretical weight: 34.43 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P46777 (Residues: 1-297; Coverage: 100%)
Gene names: MSTP030, RPL5
Pfam:
Large ribosomal subunit protein uL18 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL18 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL18 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL6
Chain: LE
Length: 288 amino acids
Theoretical weight: 32.81 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q02878 (Residues: 1-288; Coverage: 100%)
Gene names: RPL6, TXREB1
Pfam:
Large ribosomal subunit protein eL6 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL6 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL6 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL30
Chain: LF
Length: 248 amino acids
Theoretical weight: 29.29 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P18124 (Residues: 1-248; Coverage: 100%)
Gene name: RPL7
Pfam:
Large ribosomal subunit protein uL30 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL30 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL30 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL8
Chain: LG
Length: 266 amino acids
Theoretical weight: 30.06 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62424 (Residues: 1-266; Coverage: 100%)
Gene names: RPL7A, SURF-3, SURF3
Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Large ribosomal subunit protein eL8 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL8 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL8 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL6
Chain: LH
Length: 192 amino acids
Theoretical weight: 21.9 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P32969 (Residues: 1-192; Coverage: 100%)
Gene names: OK/SW-cl.103, RPL9, RPL9P7, RPL9P8, RPL9P9
Pfam: Ribosomal protein L6
Large ribosomal subunit protein uL6 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL6 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL6 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Ribosomal protein uL16-like
Chain: LI
Length: 214 amino acids
Theoretical weight: 24.55 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q96L21 (Residues: 1-214; Coverage: 100%)
Gene name: RPL10L
Pfam: Ribosomal protein L16p/L10e
Ribosomal protein uL16-like in PDB entry 8oj0, assembly 1, front view.
Ribosomal protein uL16-like in PDB entry 8oj0, assembly 1, side view.
Ribosomal protein uL16-like in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL5
Chain: LJ
Length: 178 amino acids
Theoretical weight: 20.29 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62913 (Residues: 1-178; Coverage: 100%)
Gene name: RPL11
Pfam:
Large ribosomal subunit protein uL5 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL5 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL5 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL13
Chain: LL
Length: 211 amino acids
Theoretical weight: 24.32 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P26373 (Residues: 1-211; Coverage: 100%)
Gene names: BBC1, OK/SW-cl.46, RPL13
Pfam: Ribosomal protein L13e
Large ribosomal subunit protein eL13 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL13 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL13 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL14
Chain: LM
Length: 215 amino acids
Theoretical weight: 23.49 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P50914 (Residues: 1-215; Coverage: 100%)
Gene name: RPL14
Pfam: Ribosomal protein L14
Large ribosomal subunit protein eL14 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL14 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL14 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL15
Chain: LN
Length: 204 amino acids
Theoretical weight: 24.21 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P61313 (Residues: 1-204; Coverage: 100%)
Gene names: EC45, RPL15, TCBAP0781
Pfam: Ribosomal L15
Large ribosomal subunit protein eL15 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL15 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL15 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL13
Chain: LO
Length: 203 amino acids
Theoretical weight: 23.63 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P40429 (Residues: 1-203; Coverage: 100%)
Gene name: RPL13A
Pfam: Ribosomal protein L13
Large ribosomal subunit protein uL13 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL13 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL13 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL22
Chain: LP
Length: 184 amino acids
Theoretical weight: 21.44 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P18621 (Residues: 1-184; Coverage: 100%)
Gene name: RPL17
Pfam: Ribosomal protein L22p/L17e
Large ribosomal subunit protein uL22 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL22 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL22 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL18
Chain: LQ
Length: 188 amino acids
Theoretical weight: 21.69 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q07020 (Residues: 1-188; Coverage: 100%)
Gene name: RPL18
Pfam: Ribosomal protein 60S L18 and 50S L18e
Large ribosomal subunit protein eL18 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL18 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL18 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL19
Chain: LR
Length: 196 amino acids
Theoretical weight: 23.54 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P84098 (Residues: 1-196; Coverage: 100%)
Gene name: RPL19
Pfam: Ribosomal protein L19e
Large ribosomal subunit protein eL19 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL19 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL19 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL20
Chain: LS
Length: 176 amino acids
Theoretical weight: 20.81 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q02543 (Residues: 1-176; Coverage: 100%)
Gene name: RPL18A
Pfam: Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A
Large ribosomal subunit protein eL20 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL20 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL20 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL21
Chain: LT
Length: 160 amino acids
Theoretical weight: 18.61 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P46778 (Residues: 1-160; Coverage: 100%)
Gene name: RPL21
Pfam: Ribosomal protein L21e
Large ribosomal subunit protein eL21 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL21 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL21 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL22
Chain: LU
Length: 128 amino acids
Theoretical weight: 14.81 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P35268 (Residues: 1-128; Coverage: 100%)
Gene name: RPL22
Pfam: Ribosomal L22e protein family
Large ribosomal subunit protein eL22 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL22 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL22 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL14
Chain: LV
Length: 140 amino acids
Theoretical weight: 14.89 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62829 (Residues: 1-140; Coverage: 100%)
Gene name: RPL23
Pfam: Ribosomal protein L14p/L23e
Large ribosomal subunit protein uL14 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL14 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL14 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL24
Chain: LW
Length: 157 amino acids
Theoretical weight: 17.83 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P83731 (Residues: 1-157; Coverage: 100%)
Gene name: RPL24
Pfam: Ribosomal protein L24e
Large ribosomal subunit protein eL24 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL24 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL24 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL23
Chain: LX
Length: 156 amino acids
Theoretical weight: 17.74 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62750 (Residues: 1-156; Coverage: 100%)
Gene name: RPL23A
Pfam:
Large ribosomal subunit protein uL23 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL23 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL23 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL24
Chain: LY
Length: 145 amino acids
Theoretical weight: 17.3 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P61254 (Residues: 1-145; Coverage: 100%)
Gene name: RPL26
Pfam:
Large ribosomal subunit protein uL24 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL24 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL24 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL27
Chain: LZ
Length: 136 amino acids
Theoretical weight: 15.84 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P61353 (Residues: 1-136; Coverage: 100%)
Gene name: RPL27
Pfam:
Large ribosomal subunit protein eL27 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL27 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL27 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL15
Chain: La
Length: 148 amino acids
Theoretical weight: 16.6 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P46776 (Residues: 1-148; Coverage: 100%)
Gene name: RPL27A
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
Large ribosomal subunit protein uL15 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL15 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL15 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL29
Chain: Lb
Length: 159 amino acids
Theoretical weight: 17.8 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P47914 (Residues: 1-159; Coverage: 100%)
Gene name: RPL29
Pfam: Ribosomal L29e protein family
Large ribosomal subunit protein eL29 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL29 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL29 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL30
Chain: Lc
Length: 115 amino acids
Theoretical weight: 12.81 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62888 (Residues: 1-115; Coverage: 100%)
Gene name: RPL30
Pfam: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
Large ribosomal subunit protein eL30 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL30 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL30 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL31
Chain: Ld
Length: 125 amino acids
Theoretical weight: 14.49 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62899 (Residues: 1-125; Coverage: 100%)
Gene name: RPL31
Pfam: Ribosomal protein L31e
Large ribosomal subunit protein eL31 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL31 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL31 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL32
Chain: Le
Length: 135 amino acids
Theoretical weight: 15.9 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62910 (Residues: 1-135; Coverage: 100%)
Gene names: PP9932, RPL32
Pfam: Ribosomal protein L32
Large ribosomal subunit protein eL32 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL32 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL32 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL33
Chain: Lf
Length: 110 amino acids
Theoretical weight: 12.56 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P18077 (Residues: 1-110; Coverage: 100%)
Gene names: GIG33, RPL35A
Pfam: Ribosomal protein L35Ae
Large ribosomal subunit protein eL33 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL33 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL33 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL34
Chain: Lg
Length: 117 amino acids
Theoretical weight: 13.33 KDa
Source organism: Homo sapiens environmental sample
UniProt:
  • Canonical: A0A6J3FY29 (Residues: 1-117; Coverage: 100%)
Gene name: RPL34
Pfam: Ribosomal protein L34e
Large ribosomal subunit protein eL34 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL34 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL34 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL29
Chain: Lh
Length: 123 amino acids
Theoretical weight: 14.59 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P42766 (Residues: 1-123; Coverage: 100%)
Gene name: RPL35
Pfam: Ribosomal L29 protein
Large ribosomal subunit protein uL29 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL29 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL29 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL36
Chain: Li
Length: 105 amino acids
Theoretical weight: 12.29 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: Q9Y3U8 (Residues: 1-105; Coverage: 100%)
Gene name: RPL36
Pfam: Ribosomal protein L36e
Large ribosomal subunit protein eL36 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL36 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL36 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL37
Chain: Lj
Length: 97 amino acids
Theoretical weight: 11.11 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P61927 (Residues: 1-97; Coverage: 100%)
Gene name: RPL37
Pfam: Ribosomal protein L37e
Large ribosomal subunit protein eL37 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL37 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL37 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL38
Chain: Lk
Length: 70 amino acids
Theoretical weight: 8.24 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P63173 (Residues: 1-70; Coverage: 100%)
Gene name: RPL38
Pfam: Ribosomal L38e protein family
Large ribosomal subunit protein eL38 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL38 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL38 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL39
Chain: Ll
Length: 51 amino acids
Theoretical weight: 6.43 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62891 (Residues: 1-51; Coverage: 100%)
Gene name: RPL39
Pfam: Ribosomal L39 protein
Large ribosomal subunit protein eL39 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL39 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL39 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Ubiquitin-ribosomal protein eL40 fusion protein
Chain: Lm
Length: 128 amino acids
Theoretical weight: 14.76 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62987 (Residues: 1-128; Coverage: 100%)
Gene names: UBA52, UBCEP2
Pfam:
Ubiquitin-ribosomal protein eL40 fusion protein in PDB entry 8oj0, assembly 1, front view.
Ubiquitin-ribosomal protein eL40 fusion protein in PDB entry 8oj0, assembly 1, side view.
Ubiquitin-ribosomal protein eL40 fusion protein in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL42
Chain: Lo
Length: 106 amino acids
Theoretical weight: 12.48 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P83881 (Residues: 1-106; Coverage: 100%)
Gene names: GIG15, MIG6, RPL36A, RPL44
Pfam: Ribosomal protein L44
Large ribosomal subunit protein eL42 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL42 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL42 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL43
Chain: Lp
Length: 92 amino acids
Theoretical weight: 10.3 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P61513 (Residues: 1-92; Coverage: 100%)
Gene name: RPL37A
Pfam: Ribosomal L37ae protein family
Large ribosomal subunit protein eL43 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL43 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL43 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein eL28
Chain: Lr
Length: 137 amino acids
Theoretical weight: 15.78 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P46779 (Residues: 1-137; Coverage: 100%)
Gene name: RPL28
Pfam: Ribosomal L28e protein family
Large ribosomal subunit protein eL28 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein eL28 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein eL28 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

Large ribosomal subunit protein uL1
Chain: Lz
Length: 217 amino acids
Theoretical weight: 24.88 KDa
Source organism: Homo sapiens
UniProt:
  • Canonical: P62906 (Residues: 1-217; Coverage: 100%)
Gene names: NEDD6, RPL10A
Pfam: Ribosomal protein L1p/L10e family
Large ribosomal subunit protein uL1 in PDB entry 8oj0, assembly 1, front view.
Large ribosomal subunit protein uL1 in PDB entry 8oj0, assembly 1, side view.
Large ribosomal subunit protein uL1 in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar proteins

RNA chain 5
Name: 28S ribosomal RNA
Representative chains: 5
Length: 5070 nucleotides
Theoretical weight: 1640.17 KDa
Rfam: Eukaryotic large subunit ribosomal RNA
28S ribosomal RNA in PDB entry 8oj0, assembly 1, front view.
28S ribosomal RNA in PDB entry 8oj0, assembly 1, side view.
28S ribosomal RNA in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar RNA

RNA chain 7
Name: 5S ribosomal RNA
Representative chains: 7
Length: 121 nucleotides
Theoretical weight: 39 KDa
Rfam: 5S ribosomal RNA
5S ribosomal RNA in PDB entry 8oj0, assembly 1, front view.
5S ribosomal RNA in PDB entry 8oj0, assembly 1, side view.
5S ribosomal RNA in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar RNA

RNA chain 8
Name: 5.8S ribosomal RNA
Representative chains: 8
Length: 157 nucleotides
Theoretical weight: 50.45 KDa
Rfam: 5.8S ribosomal RNA
5.8S ribosomal RNA in PDB entry 8oj0, assembly 1, front view.
5.8S ribosomal RNA in PDB entry 8oj0, assembly 1, side view.
5.8S ribosomal RNA in PDB entry 8oj0, assembly 1, top view.
Molecule details ›

Search similar RNA

Quick links