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Crystal structure of the TRIM58 PRY-SPRY domain in complex with TRIM-473

X-ray diffraction
1.3Å resolution
PDB entry 8pd6 coloured by chain, front view.
PDB entry 8pd6 coloured by chain, side view.
PDB entry 8pd6 coloured by chain, top view.
Source organism: Homo sapiens
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: E3 ubiquitin-protein ligase TRIM58
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Multimeric state: monomeric
Accessible surface area: 8622.88 Å2
Buried surface area: 504.59 Å2
Dissociation area: 98.54 Å2
Dissociation energy (ΔGdiss): -3 kcal/mol
Dissociation entropy (TΔSdiss): -0.26 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-275177

Macromolecules

E3 ubiquitin-protein ligase TRIM58
Chain: A
Length: 218 amino acids
Theoretical weight: 24.23 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8NG06 (Residues: 251-466; Coverage: 44%)
Gene name: TRIM58
Pfam:
E3 ubiquitin-protein ligase TRIM58 in PDB entry 8pd6, assembly 1, front view.
E3 ubiquitin-protein ligase TRIM58 in PDB entry 8pd6, assembly 1, side view.
E3 ubiquitin-protein ligase TRIM58 in PDB entry 8pd6, assembly 1, top view.
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