GO terms
Biochemical function:
- not assigned
The rotavirus VP5*/VP8* conformational transition permeabilizes membranes to Ca2+ (class 5 reconstruction)
Source organism:
Simian rotavirus A strain RRV
Biochemical function:
not assigned
Biological process: symbiont entry into host cell via permeabilization of host membrane
Cellular component: viral capsid
Biological process: symbiont entry into host cell via permeabilization of host membrane
Cellular component: viral capsid
Protein families (Pfam)![The deposited structure of PDB entry 8uk2 contains 18 copies of Pfam domain PF00434 (Glycoprotein VP7) in Outer capsid glycoprotein VP7. Showing 1 copy in chain H [auth j].](https://www.ebi.ac.uk/pdbe/static/entry/8uk2_2_j_Pfam_PF00434_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8uk2</span> contains 18 copies of Pfam domain <span class='highlight'>PF00434 (Glycoprotein VP7)</span> in <span class='highlight'>Outer capsid glycoprotein VP7</span>. Showing 1 copy in chain <span class='highlight'>H [auth j]</span>.")
![The deposited structure of PDB entry 8uk2 contains 3 copies of Pfam domain PF17478 (Rotavirus VP4 helical domain) in Outer capsid protein VP4. Showing 1 copy in chain A [auth 1].](https://www.ebi.ac.uk/pdbe/static/entry/8uk2_1_1_Pfam_PF17478_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8uk2</span> contains 3 copies of Pfam domain <span class='highlight'>PF17478 (Rotavirus VP4 helical domain)</span> in <span class='highlight'>Outer capsid protein VP4</span>. Showing 1 copy in chain <span class='highlight'>A [auth 1]</span>.")
![The deposited structure of PDB entry 8uk2 contains 3 copies of Pfam domain PF17477 (Rotavirus VP4 membrane interaction domain) in Outer capsid protein VP4. Showing 1 copy in chain A [auth 1].](https://www.ebi.ac.uk/pdbe/static/entry/8uk2_1_1_Pfam_PF17477_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8uk2</span> contains 3 copies of Pfam domain <span class='highlight'>PF17477 (Rotavirus VP4 membrane interaction domain)</span> in <span class='highlight'>Outer capsid protein VP4</span>. Showing 1 copy in chain <span class='highlight'>A [auth 1]</span>.")
![The deposited structure of PDB entry 8uk2 contains 3 copies of Pfam domain PF00426 (Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain) in Outer capsid protein VP4. Showing 1 copy in chain A [auth 1] (this domain is out of the observed residue ranges!).](https://www.ebi.ac.uk/pdbe/static/entry/8uk2_1_1_Pfam_PF00426_image-200x200.png "The deposited structure of PDB entry <span class='highlight'>8uk2</span> contains 3 copies of Pfam domain <span class='highlight'>PF00426 (Outer Capsid protein VP4 (Hemagglutinin) Concanavalin-like domain)</span> in <span class='highlight'>Outer capsid protein VP4</span>. Showing 1 copy in chain <span class='highlight'>A [auth 1]</span> (this domain is out of the observed residue ranges!).")