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Omicron-S-MERS-RBD

Electron Microscopy
3.4Å resolution
PDB entry 8upx coloured by chain, front view.
PDB entry 8upx coloured by chain, side view.
PDB entry 8upx coloured by chain, top view.
Source organisms:
Assembly composition:
homo trimer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Spike protein S2
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Multimeric state: homo trimer
Accessible surface area: 136828.21 Å2
Buried surface area: 32693.47 Å2
Dissociation area: 12,744.69 Å2
Dissociation energy (ΔGdiss): 122.66 kcal/mol
Dissociation entropy (TΔSdiss): 36.7 kcal/mol
Symmetry number: 3
PDBe Complex ID: PDB-CPX-268744

Macromolecules

Spike protein S2
Chains: A, B, C
Length: 1249 amino acids
Theoretical weight: 138.17 KDa
Source organisms: Expression system: Homo sapiens
UniProt:
  • Canonical: A0A7T8KZF1 (Residues: 14-207, 208-208, 214-327, 537-566, 678-679, 681-712, 1224-1225; Coverage: 29%)
  • Canonical: A0A0U2MMB6 (Residues: 272-273, 390-588, 603-604, 749-749, 784-786, 1311-1311; Coverage: 15%)
  • Canonical: A0A8B1J577 (Residues: 570-680, 719-1211; Coverage: 47%)
    • nullnullnull
Gene name: S
Pfam:
Spike protein S2 in PDB entry 8upx, assembly 1, front view.
Spike protein S2 in PDB entry 8upx, assembly 1, side view.
Spike protein S2 in PDB entry 8upx, assembly 1, top view.
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