› 8vxq

Electron Microscopy
3.1Å resolution

Cryo-EM structure of phage DEV ejection proteins gp72:gp73

Released:
DOI: 10.2210/pdb8vxq/pdb
PDB entry 8vxq coloured by chain, front view.
PDB entry 8vxq coloured by chain, side view.
PDB entry 8vxq coloured by chain, top view.
Source organism: Pseudomonas phage vB_PaeP_DEV
Primary publication:
Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor.
Cingolani G, Lokareddy R, Hou CF, Forti F, Iglesias S, Li F, Pavlenok M, Niederweis M, Briani F
Res Sq (2024)
PMID: 38463957
Related structures: EMD-43629

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero octadecamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-242485 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
gp72 Chains: J, K, L, M, N, O, P, Q, R
Molecule details ›
Chains: J, K, L, M, N, O, P, Q, R
Length: 521 amino acids
Theoretical weight: 57.18 KDa
Source organism: Pseudomonas phage vB_PaeP_DEV
UniProt:
  • Canonical: A0A2K8HKQ8 (Residues: 1-521; Coverage: 100%)
Gene name: vBPaePDEV_00072
N4 gp52-like protein Chains: A, B, C, D, E, F, G, H, I
Molecule details ›
Chains: A, B, C, D, E, F, G, H, I
Length: 155 amino acids
Theoretical weight: 16.64 KDa
Source organism: Pseudomonas phage vB_PaeP_DEV
UniProt:
  • Canonical: A0A2K8I0A4 (Residues: 1-155; Coverage: 100%)
Gene name: vBPaePDEV_00073

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 3.1Å
Relevant EMDB volumes: EMD-43629

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