PDB 8wdd biological assemblies and structure analysis ‹ Protein Data Bank in Europe (PDBe)

Assemblies

Assembly 1 (preferred)

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Assembly Name: Albumin
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Multimeric state: monomeric

Accessible surface area: 29998.57 Å²

Buried surface area: 0.0 Å²

Dissociation area: 0 Å²

Dissociation energy (ΔG^diss): 0 kcal/mol

Dissociation entropy (TΔS^diss): 0 kcal/mol

Symmetry number: 1

PDBe Complex ID: PDB-CPX-136190

$Monomeric assembly 1 of PDB entry 8wdd coloured by chemically distinct molecules, front view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>1 copy of Albumin;</li> <li class='image_legend_li'>3 copies of ~{N},~{N}-dimethyl-6-[(~{E})-2-(1-methylpyridin-1-ium-4-yl)ethenyl]naphthalen-2-amine.</li></ul>}$

$Monomeric assembly 1 of PDB entry 8wdd coloured by chemically distinct molecules, side view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>1 copy of Albumin;</li> <li class='image_legend_li'>3 copies of ~{N},~{N}-dimethyl-6-[(~{E})-2-(1-methylpyridin-1-ium-4-yl)ethenyl]naphthalen-2-amine.</li></ul>}$

$Monomeric assembly 1 of PDB entry 8wdd coloured by chemically distinct molecules, top view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>1 copy of Albumin;</li> <li class='image_legend_li'>3 copies of ~{N},~{N}-dimethyl-6-[(~{E})-2-(1-methylpyridin-1-ium-4-yl)ethenyl]naphthalen-2-amine.</li></ul>}$

Assembly 2

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Assembly Name: Albumin
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Multimeric state: monomeric

Accessible surface area: 32123.22 Å²

Buried surface area: 0.0 Å²

Dissociation area: 0 Å²

Dissociation energy (ΔG^diss): 0 kcal/mol

Dissociation entropy (TΔS^diss): 0 kcal/mol

Symmetry number: 1

PDBe Complex ID: PDB-CPX-136190

$Monomeric assembly 2 of PDB entry 8wdd coloured by chemically distinct molecules, front view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>1 copy of Albumin;</li> <li class='image_legend_li'>6 copies of ~{N},~{N}-dimethyl-6-[(~{E})-2-(1-methylpyridin-1-ium-4-yl)ethenyl]naphthalen-2-amine.</li></ul>}$

$Monomeric assembly 2 of PDB entry 8wdd coloured by chemically distinct molecules, side view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>1 copy of Albumin;</li> <li class='image_legend_li'>6 copies of ~{N},~{N}-dimethyl-6-[(~{E})-2-(1-methylpyridin-1-ium-4-yl)ethenyl]naphthalen-2-amine.</li></ul>}$

$Monomeric assembly 2 of PDB entry 8wdd coloured by chemically distinct molecules, top view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>1 copy of Albumin;</li> <li class='image_legend_li'>6 copies of ~{N},~{N}-dimethyl-6-[(~{E})-2-(1-methylpyridin-1-ium-4-yl)ethenyl]naphthalen-2-amine.</li></ul>}$

Macromolecules

Albumin

Chains: A, B
Length: 583 amino acids
Theoretical weight: 66.53 KDa
Source organism: Bos taurus
Expression system: Bos taurus
UniProt:

Canonical: P02769 (Residues: 25-607; Coverage: 99%)

Gene name: ALB
Pfam: Serum albumin family

Albumin in PDB entry 8wdd, assembly 1, front view.

Albumin in PDB entry 8wdd, assembly 1, side view.

Albumin in PDB entry 8wdd, assembly 1, top view.

FASTA Sequence


    >pdb|8wdd|A B

DTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPFDEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEPERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYYANKYNGVFQECCQAEDKGACLLPKIETMREKVLASSARQRLRCASIQKFGERALKAWSVARLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKECCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRRHPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEKLGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLILNRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLPDTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVVSTQTALA

PDBe-KB: UniProt Coverage View: P02769

Molecule details ›

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FASTA (Protein chains A, B)
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Updated mmCIF file
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PDBML
PDBML (ATOM lines)
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Structure Factors
SIFTS XML file with residue-level mappings

Search similar proteins

Similar 3D structures (PDBeFold)
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BLAST P02769 (UniProt)

Protein Data Bank in Europe

Crystal structure of BSA in complex with B1

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Assemblies

Assembly 1 (preferred)

Assembly 2

Macromolecules

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PDBe › 8wdd › Structure analysis

Crystal structure of BSA in complex with B1

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Assemblies

Assembly 1 (preferred)

Assembly 2

Macromolecules

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8wdd › Structure analysis