The Electron Microscopy Data Bank (EMDB) is a public repository for cryogenic-sample Electron Microscopy (cryoEM) volumes and representative tomograms of macromolecular complexes and subcellular structures. It covers a variety of techniques, including single-particle analysis, helical reconstruction, electron tomography, subtomogram averaging, and electron crystallography. More...
As of 08 May 2024, EMDB contains 35330 entries (latest entries, trends).
EMDB News
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06 January 2024: We are delighted to share that EMDB has officially been elevated to a Core Data Resource by ELIXIR, recognising it as a European data resource of fundamental importance to the wider life-science community and the long-term preservation of biological data.
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22 November 2023: We are happy to share the most recent version of the EMDB Nucleic Acids Research paper. The paper describes recent developments and future plans of the EMDB in the context of the worldwide Protein Data Bank. Check it out now! https://doi.org/10.1093/nar/gkad1019
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Recent Entries
(Show all)T cell receptor delta 2 gamma 9 with F283A, F290A, and F291A (DeepEMhancer)
Cryo-EM map of the human CTF18-RFC-PCNA binary complex in the four-subunit binding state (state 3)
nhTMEM16 lipid scramblase in lipid nanodiscs with MSP2N2 scaffold protein in the presence of Ca2+ (open state)
Cryo-EM map of the Rpd3S region of Rpd3S-nucleosome complex in State1
Cryo-EM structure of TRPM2 chanzyme in the presence of EDTA (apo state)
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-28 days post immunization
Structural insights into cellular control of the human CPEB3 prion, functionally regulated by a labile-amyloid-forming segment
CRYO-EM CONSENSUS MAP OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
Structure of human oligosaccharyltransferase OST-A complex bound to NGI-1
Cryo-EM map of the human CTF18-RFC-PCNA-DNA ternary complex with cracked and closed PCNA (state 7)
TRPV1 in nanodisc bound with PI-Br4 bound in Conformation 2 (monomer)
Cryo-EM map of the human CTF18-RFC alone in the apo state (State 1)
nhTMEM16 lipid scramblase in lipid nanodiscs with MSP1E3 scaffold protein in the presence of Ca2+ (closed state)
nhTMEM16 A444P mutant in lipid nanodiscs with MSP1E3 scaffold protein in the presence of Ca2+ (bent TM6)
Cryo-EM structure of the DNA polymerase holoenzyme E9-A20-D4 of vaccinia virus
nhTMEM16 lipid scramblase in lipid nanodiscs with MSP1E3 scaffold protein in the presence of Ca2+ (closed state) (consensus map)
nhTMEM16 R432A mutant in lipid nanodiscs with MSP2N2 scaffold protein in the presence of Ca2+
Cryo-EM map of the human CTF18-RFC-PCNA-DNA ternary complex in the five-subunit binding state (state 4)
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-15 days post immunization
Langya henipavirus postfusion fusion protein in complex with 4G5 Fab (global refinement)
SARS-CoV-2 Omicron BA.1 spike protein in complex with a self-assembling trivalent nanobody Tr67
Cryo-EM structure of TRPM2 chanzyme in the presence of Magnesium, Adenosine monophosphate, and Ribose-5-phosphate
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
CryoEM structure of A/Perth/16/2009 H3 in complex with flu HA central stem VH1-18 antibody UCA6
Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing bi-specific antibody CAP256L-R27 targeting the CD4-binding site and the V2-apex
nhTMEM16 lipid scramblase in lipid nanodiscs with MSP2N2 scaffold protein in the presence of Ca2+ (intermediate state)
Cryo-EM map of the human CTF18-RFC-PCNA-DNA ternary complex with narrow PCNA opening state II (state 6)
TRPV1 in Nanodisc bound with lysophosphatidic acid in all four monomers
1.4A Tobacco Mosaic Virus (CryoSPARC processing from Falcon 4 data)
Structure of avian H5N1 influenza A polymerase dimer in complex with human ANP32B (Encapsidase focused).
Cryo-EM map of the human CTF18-RFC-PCNA binary complex in the three-subunit binding state (state 2)
Monkeypox virus DNA replication holoenzyme F8, A22 and E4 in complex with a DNA duplex and cidofovir diphosphate
Cryo-EM structure of TRPM2 chanzyme in the presence of EDTA and ADP-ribose
Structure of avian H5N1 influenza A polymerase dimer in complex with human ANP32B (Consensus map)
nhTMEM16 A444P mutant in lipid nanodiscs with MSP1E3 scaffold protein in the presence of Ca2+ (long TM6)
nhTMEM16 lipid scramblase in lipid nanodiscs with MSP1E3 scaffold protein in the presence of Ca2+ (open state)
Cryo-EM structure of TRPM2 chanzyme in the presence of Calcium and ADP-ribose
nhTMEM16 lipid scramblase in lipid nanodiscs with MSP1E3 scaffold protein in the presence of Ca2+ (closed state)(local refined monomer map)
T cell receptor delta 2 gamma 9 with TCRD TM domain chimera of TRAC (DeepEMhancer)
Cryo-EM map of the Rpd3S region of Rpd3S-Nulceosome complex in State 2
Influence of lipid bilayer on structure of acetylcholine receptor
Cryo-EM structure of Myxococcus xanthus EncA encapsulin shell loaded with EncD cargo
Cryo-EM map of the nucleosome region of Rpd3S-nucleosome complex in State 1
Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing llama nanobody G36 targeting the CD4-binding site
Structure of avian H5N1 influenza A polymerase dimer in complex with human ANP32B.
nhTMEM16 A444P mutant in lipid nanodiscs with MSP1E3 scaffold protein in the presence of Ca2+ (short TM6)
Langya henipavirus postfusion F protein in complex with 4G5 Fab, local refinement of the viral membrane proximal region
Cryo-EM map of the human CTF18-RFC-PCNA-DNA ternary complex with narrow PCNA opening state I (state 5)
Langya henipavirus postfusion F protein in complex with the 4G5 Fab, local refinement of the viral membrane distal region
Influence of lipid bilayer on structure of acetylcholine receptor
Influence of lipid bilayer on structure of acetylcholine receptor
Cryo-EM structure of human invariant chain in complex with HLA-DQ
TRPV1 in nanodisc bound with empty vanilloid binding pocket at 4C
TRPV1 in nanodisc bound with PI-Br4 bound in Conformation 1 (monomer)
Influence of lipid bilayer on structure of acetylcholine receptor
Influence of lipid bilayer on structure of acetylcholine receptor
Subtomogram average of immature PhiKZ Major Capsid Protein from tubular arrays
Influence of lipid bilayer on structure of acetylcholine receptor
Monkeypox virus DNA replication holoenzyme F8, A22 and E4 in complex with a DNA duplex and dCTP
Influence of lipid bilayer on structure of acetylcholine receptor
CRYO-EM FOCUSED REFINEMENT MAP OF LEISHMANIA MAJOR 80S RIBOSOME : PARENTAL STRAIN
MD65 N332-GT5 SOSIP in complex with RM_N332_08 Fab and RM20A3 Fab
Cryo-EM co-structure of AcrB with the EPM35 efflux pump inhibitor
Influence of lipid bilayer on structure of acetylcholine receptor
Structure of avian H5N1 influenza A polymerase dimer in complex with human ANP32B (Replicase focused).
CryoEM structure of A/Perth/16/2009 H3 in complex with polyclonal Fab from mice immunized with H3 stem nanoparticles-28 days post immunization
Cryo-EM co-structure of AcrB with the CU032 efflux pump inhibitor
Influence of lipid bilayer on structure of acetylcholine receptor
CryoEM structure of A/Shanghai/1/2013 H7 in complex with polyclonal Fab from mice immunized with H7 stem nanoparticles-15 days post-immunization
Cryo-EM map of the nucleosome region of Rpd3S-nucleosome complex in State 3
Cryo-EM map of the nucleosome region of Rpd3S-nucleosome complex in State 2
Artificial membrane protein TMHC4_R (ROCKET) mutant R9A/K10A/R13A
Locally refined SARS-CoV-2 BA-2.86 Spike receptor binding domain (RBD) complexed with angiotensin converting enzyme 2 (ACE2)
Influence of lipid bilayer on structure of acetylcholine receptor
Influence of lipid bilayer on structure of acetylcholine receptor
PHF filament generated from 4E-Tau(297-407) under neutral Mg2+ condition
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody 09-1B12
MD65 N332-GT5 SOSIP in complex with RM_N332_07 Fab and RM20A3 Fab
Influence of lipid bilayer on structure of acetylcholine receptor
Cryo-EM structure of human invariant chain in complex with HLA-DR15
nhTMEM16 A444P mutant in lipid nanodiscs with MSP1E3 scaffold protein in the presence of Ca2+ (long TM6/short TM6)
Influence of lipid bilayer on structure of acetylcholine receptor
TRPV1 in nanodisc bound with 2 LPA molecules in neighboring monomers
Cryo-EM structure of HIV-1 Env BG505 DS-SOSIP in complex with broadly neutralizing llama nanobody R27 targeting the CD4-binding site
nhTMEM16 lipid scramblase in lipid nanodiscs with MSP1E3 scaffold protein in the absence of Ca2+
CryoEM structure of A/Michigan/45/2015 H1 in complex with flu HA central stem VH1-18 antibody UCA6_N55T
MD65 N332-GT5 SOSIP in complex with RM_N332_03 Fab and RM20A3 Fab
TRPV1 in nanodisc bound with two LPA molecules in opposite monomers
T cell receptor delta 2 gamma 9 with TCRD TM domain chimera of TRAC
Influence of lipid bilayer on structure of acetylcholine receptor
Cryo-EM map of the Rpd3S region of Rpd3S-nucleosome complex in State 3
Influence of lipid bilayer on structure of acetylcholine receptor
Influence of lipid bilayer on structure of acetylcholine receptor
Influence of lipid bilayer on structure of acetylcholine receptor
Structure of avian H5N1 influenza A polymerase in complex with human ANP32B.