CryoEM structure of dsDNA-RuvB-RuvA domain3 complex
Resolution: 7.02 Å
EM Method: Single-particle
Fitted PDBs: 7x7p
Q-score: 0.186
Zhang X, Zhou Z, Dai L, Chao Y, Liu Z, Huang M, Qu Q, Lin Z
Front Plant Sci (2023) 14 pp. 1139106-1139106 [ DOI: doi:10.3389/fpls.2023.1139106 Pubmed: 37025142 ]
- Ruvb region of the ruva-ruvb-holliday junction complex (Complex from synthetic construct)
- Holliday junction atp-dependent dna helicase ruvb (34 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Dna (7 kDa, DNA from synthetic construct)
- Holliday junction atp-dependent dna helicase ruva (4 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Dna (7 kDa, DNA from synthetic construct)
- Ruvb-ruva (Complex)
- Dna (Complex from Pseudomonas aeruginosa PAO1)
CryoEM structure of RuvA-RuvB-Holliday junction complex
Resolution: 7.02 Å
EM Method: Single-particle
Fitted PDBs: 7x7q
Q-score: 0.167
Zhang X, Zhou Z, Dai L, Chao Y, Liu Z, Huang M, Qu Q, Lin Z
Front Plant Sci (2023) 14 pp. 1139106-1139106 [ DOI: doi:10.3389/fpls.2023.1139106 Pubmed: 37025142 ]
- Holliday junction atp-dependent dna helicase ruva (21 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Ruva-ruvb-holliday junction complex (Complex from Pseudomonas aeruginosa PAO1)
- Dna (26-mer) (7 kDa, DNA from synthetic construct)
- Ruva-ruvb (Complex from synthetic construct)
- Dna (40-mer) (12 kDa, DNA from synthetic construct)
- Dna (40-mer) (12 kDa, DNA from synthetic construct)
- Holliday junction atp-dependent dna helicase ruvb (38 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Dna (26-mer) (7 kDa, DNA from synthetic construct)
- Dna (Complex)
CryoEM structure of RuvA-Holliday junction complex
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 7x5a
Q-score: 0.5
Zhang X, Zhou Z, Dai L, Chao Y, Liu Z, Huang M, Qu Q, Lin Z
Front Plant Sci (2023) 14 pp. 1139106-1139106 [ DOI: doi:10.3389/fpls.2023.1139106 Pubmed: 37025142 ]
- Ruva-holliday junction complex (Complex)
- Dna (26-mer) (7 kDa, DNA from synthetic construct)
- Ruva (Complex from Pseudomonas aeruginosa PAO1)
- Holliday junction atp-dependent dna helicase ruva (15 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Dna (26-mer) (7 kDa, DNA from synthetic construct)
- Dna (26-mer) (7 kDa, DNA from synthetic construct)
- Holliday junction (Complex)
- Dna (26-mer) (7 kDa, DNA from synthetic construct)
Cryo-EM structure of P.aeruginosa MlaFEBD with ADP-V
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7ch8
Q-score: 0.401
Zhou C, Shi H, Zhang M, Zhou L, Xiao L, Feng S, Im W, Zhou M, Zhang X, Huang Y
J Mol Biol (2021) 433 pp. 166986-166986 [ DOI: doi:10.1016/j.jmb.2021.166986 Pubmed: 33845086 ]
- E.coli mlafeb bond with amppnp (Complex from Escherichia coli K-12)
- Mlad domain-containing protein (16 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
- Probable permease of abc transporter (28 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
- Probable atp-binding component of abc transporter (29 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
- Adp metavanadate (527 Da, Ligand)
- 2-(hexadecanoyloxy)-1-[(phosphonooxy)methyl]ethyl hexadecanoate (648 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Stas domain-containing protein (10 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
Cryo-EM structure of P.aeruginosa MlaFEBD
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ch9
Q-score: 0.427
Zhou C, Shi H, Zhang M, Zhou L, Xiao L, Feng S, Im W, Zhou M, Zhang X, Huang Y
J Mol Biol (2021) 433 pp. 166986-166986 [ DOI: doi:10.1016/j.jmb.2021.166986 Pubmed: 33845086 ]
- Mlad domain-containing protein (16 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
- Probable permease of abc transporter (28 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
- Cryo-em structure of p.aeruginosa mlafebd (Complex from Pseudomonas aeruginosa PAO1)
- Probable atp-binding component of abc transporter (29 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
- 2-(hexadecanoyloxy)-1-[(phosphonooxy)methyl]ethyl hexadecanoate (648 Da, Ligand)
- Stas domain-containing protein (10 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
Cryo-EM structure of P.aeruginosa MlaFEBD with AMPPNP
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7cha
Q-score: 0.386
Zhou C, Shi H, Zhang M, Zhou L, Xiao L, Feng S, Im W, Zhou M, Zhang X, Huang Y
J Mol Biol (2021) 433 pp. 166986-166986 [ DOI: doi:10.1016/j.jmb.2021.166986 Pubmed: 33845086 ]
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Mlad domain-containing protein (16 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
- Probable atp-binding component of abc transporter,p.aeruginosa mla f (29 kDa, Protein from Pseudomonas aeruginosa PAO1)
- Cryo-em structure of p.aeruginosa mlafebd with amppnp (Complex from Pseudomonas aeruginosa PAO1)
- Probable permease of abc transporter (28 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))
- 2-(hexadecanoyloxy)-1-[(phosphonooxy)methyl]ethyl hexadecanoate (648 Da, Ligand)
- Stas domain-containing protein (10 kDa, Protein from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1))