Electron Microscopy Data Bank

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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primary_citation_author:"Venugopal H" AND citation_journal_name:"J BIOL CHEM"

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EMD-22682

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Plasmodium vivax M17 leucyl aminopeptidase Pv-M17

Release date: Dec. 16, 2020
Resolution: 2.66 Å
EM Method: Single-particle
Fitted PDBs: 7k5k
Q-score: 0.618

Malcolm TR, Belousoff MJ, Venugopal H, Borg NA, Drinkwater N, Atkinson SC, McGowan S

J Biol Chem (2020) 296 pp. 100173-100173 [ Pubmed: 33303633 DOI: doi:10.1074/jbc.RA120.016313 ]

Sample:

Pvm17-hexamer (Complex from Plasmodium vivax)
M17 leucyl aminopeptidase, putative (60 kDa, Protein from Plasmodium vivax)
Carbonate ion (60 Da, Ligand)
Manganese (ii) ion (54 Da, Ligand)

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EMD-22422

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Structure of an endocytic receptor

Release date: Dec. 9, 2020
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7jpt
Q-score: 0.456

Gully BS, Venugopal H, Fulcher AJ, Fu Z, Li J, Deuss FA, Llerena C, Heath WR, Lahoud MH, Caminschi I, Rossjohn J, Berry R

J Biol Chem (2020) 296 pp. 100127-100127 [ DOI: doi:10.1074/jbc.RA120.016451 Pubmed: 33257321 ]

Sample:

Lymphocyte antigen 75 (195 kDa, Protein from Homo sapiens)
Lymphocyte antigen 75, dec205, cd205 (200 kDa, Cellular component from Homo sapiens)
2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)

EMD-22423

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Structure of an endocytic receptor

Release date: Dec. 9, 2020
Resolution: 5.0 Å
EM Method: Single-particle
Fitted PDBs: 7jpu
Q-score: 0.161

Gully BS, Venugopal H, Fulcher AJ, Fu Z, Li J, Deuss FA, Llerena C, Heath WR, Lahoud MH, Caminschi I, Rossjohn J, Berry R

J Biol Chem (2020) 296 pp. 100127-100127 [ Pubmed: 33257321 DOI: doi:10.1074/jbc.RA120.016451 ]

Sample:

Lymphocyte antigen 75, dec205, cd205 (200 kDa, Cellular component from Homo sapiens)
Lymphocyte antigen 75 (198 kDa, Protein from Homo sapiens)

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