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sample_name:"bL34m"
Structure of the mitochondrial ribosome from Polytomella magna with tRNAs bound to the A and P sites
Release date: June 21, 2023
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8apo
Q-score: 0.231
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8apo
Q-score: 0.231
Tobiasson V, Berzina I, Amunts A
Nat Commun (2022) 13 pp. 6132-6132 [ Pubmed: 36253367 DOI: doi:10.1038/s41467-022-33582-5 ]
Sample:
- Mtlsu-3 (66 kDa, RNA from Polytomella magna)
- Ul30m (20 kDa, Protein from Polytomella magna)
- Ms106 (18 kDa, Protein from Polytomella magna)
- Us10m (45 kDa, Protein from Polytomella magna)
- Us3m (31 kDa, Protein from Polytomella magna)
- Us4m-2 (20 kDa, Protein from Polytomella magna)
- Ml43 (14 kDa, Protein from Polytomella magna)
- Ms114 (15 kDa, Protein from Polytomella magna)
- Ml127 (16 kDa, Protein from Polytomella magna)
- Ml116 (46 kDa, Protein from Polytomella magna)
- Bl28m (15 kDa, Protein from Polytomella magna)
- Mtlsu-8 (112 kDa, RNA from Polytomella magna)
- Ml105 (15 kDa, Protein from Polytomella magna)
- Ul14m (13 kDa, Protein from Polytomella magna)
- Us4m (25 kDa, Protein from Polytomella magna)
- Mtlsu-6 (35 kDa, RNA from Polytomella magna)
- Water (18 Da, Ligand)
- Ml46 (20 kDa, Protein from Polytomella magna)
- Bl32m (6 kDa, Protein from Polytomella magna)
- Ms33 (9 kDa, Protein from Polytomella magna)
- Ms109 (18 kDa, Protein from Polytomella magna)
- Us3m-2 (12 kDa, Protein from Polytomella magna)
- Ml120 (22 kDa, Protein from Polytomella magna)
- Ms45 (30 kDa, Protein from Polytomella magna)
- Unknown (3 kDa, Protein from Polytomella magna)
- Bs18m (10 kDa, Protein from Polytomella magna)
- Bl24m (13 kDa, Protein from Polytomella magna)
- Bs19m (10 kDa, Protein from Polytomella magna)
- Ms113 (7 kDa, Protein from Polytomella magna)
- Bl19m (19 kDa, Protein from Polytomella magna)
- Bl36m (5 kDa, Protein from Polytomella magna)
- Ul2m (33 kDa, Protein from Polytomella magna)
- Mitochondrial ribosome from polytomella magna in complex with a and p site trna as well as mrna (Complex from Polytomella magna)
- Us7m-2 (9 kDa, Protein from Polytomella magna)
- Ms108 (5 kDa, Protein from Polytomella magna)
- Bl17m (20 kDa, Protein from Polytomella magna)
- Ms38 (4 kDa, Protein from Polytomella magna)
- A-site trna anticodon loop (6 kDa, RNA from Polytomella magna)
- Unknown (1 kDa, Protein from Polytomella magna)
- Mtlsu-2 (26 kDa, RNA from Polytomella magna)
- Bs1m (27 kDa, Protein from Polytomella magna)
- Potassium ion (39 Da, Ligand)
- Ul23m (18 kDa, Protein from Polytomella magna)
- Mtssu-3 (122 kDa, RNA from Polytomella magna)
- Ml123 (45 kDa, Protein from Polytomella magna)
- Ul5m (21 kDa, Protein from Polytomella magna)
- Ul15m (22 kDa, Protein from Polytomella magna)
- Bl20m (13 kDa, Protein from Polytomella magna)
- Unknown (2 kDa, Protein from Polytomella magna)
- Us14m (13 kDa, Protein from Polytomella magna)
- Ul13m (21 kDa, Protein from Polytomella magna)
- Ml41 (10 kDa, Protein from Polytomella magna)
- Ml129 (8 kDa, Protein from Polytomella magna)
- Unknown (1 kDa, Protein from Polytomella magna)
- Us8m (43 kDa, Protein from Polytomella magna)
- Bl21m (22 kDa, Protein from Polytomella magna)
- Mtssu-2 (67 kDa, RNA from Polytomella magna)
- Us2m (26 kDa, Protein from Polytomella magna)
- Ms110 (11 kDa, Protein from Polytomella magna)
- Ms107 (42 kDa, Protein from Polytomella magna)
- Ul9m (6 kDa, Protein from Polytomella magna)
- Mtlsu-5 (43 kDa, RNA from Polytomella magna)
- Ul4m (33 kDa, Protein from Polytomella magna)
- Unknown (2 kDa, Protein from Polytomella magna)
- Ml64 (14 kDa, Protein from Polytomella magna)
- Ml125 (22 kDa, Protein from Polytomella magna)
- Ml126 (44 kDa, Protein from Polytomella magna)
- Bl33m (5 kDa, Protein from Polytomella magna)
- Ml63 (7 kDa, Protein from Polytomella magna)
- Unknown (5 kDa, Protein from Polytomella magna)
- Us9m (32 kDa, Protein from Polytomella magna)
- Unknown (783 Da, Protein from Polytomella magna)
- Ms26 (19 kDa, Protein from Polytomella magna)
- Bl31m (8 kDa, Protein from Polytomella magna)
- Bl25m (28 kDa, Protein from Polytomella magna)
- Us6m (13 kDa, Protein from Polytomella magna)
- Ml118 (40 kDa, Protein from Polytomella magna)
- Mtlsu-1 (35 kDa, RNA from Polytomella magna)
- Ul6m (27 kDa, Protein from Polytomella magna)
- Ms35 (19 kDa, Protein from Polytomella magna)
- Magnesium ion (24 Da, Ligand)
- Ms112 (7 kDa, Protein from Polytomella magna)
- Ms116 (10 kDa, Protein from Polytomella magna)
- Us15m (18 kDa, Protein from Polytomella magna)
- Bl35m (16 kDa, Protein from Polytomella magna)
- Us7m (12 kDa, Protein from Polytomella magna)
- Ul29m (14 kDa, Protein from Polytomella magna)
- Bs16m (14 kDa, Protein from Polytomella magna)
- Ul22m (21 kDa, Protein from Polytomella magna)
- Unknown (954 Da, Protein from Polytomella magna)
- Mtlsu-4 (23 kDa, RNA from Polytomella magna)
- Ms115 (40 kDa, Protein from Polytomella magna)
- Unknown (4 kDa, Protein from Polytomella magna)
- Ml121 (27 kDa, Protein from Polytomella magna)
- Ul16m (19 kDa, Protein from Polytomella magna)
- Ms34 (14 kDa, Protein from Polytomella magna)
- Ms23 (19 kDa, Protein from Polytomella magna)
- Bs21m (8 kDa, Protein from Polytomella magna)
- Ms29 (39 kDa, Protein from Polytomella magna)
- P-site trna anticodon loop (7 kDa, RNA from Polytomella magna)
- Ms111 (17 kDa, Protein from Polytomella magna)
- Ul3m (34 kDa, Protein from Polytomella magna)
- Ml128 (2 kDa, Protein from Polytomella magna)
- Ml124 (52 kDa, Protein from Polytomella magna)
- Mt-5s (22 kDa, RNA from Polytomella magna)
- Bl34m (6 kDa, Protein from Polytomella magna)
- Us11m (12 kDa, Protein from Polytomella magna)
- Unknown (6 kDa, Protein from Polytomella magna)
- Zinc ion (65 Da, Ligand)
- Us17m (15 kDa, Protein from Polytomella magna)
- Ml87 (16 kDa, Protein from Polytomella magna)
- Ml122 (7 kDa, Protein from Polytomella magna)
- Ms37 (9 kDa, Protein from Polytomella magna)
- Mrna (2 kDa, RNA from Polytomella magna)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Bl27m (16 kDa, Protein from Polytomella magna)
- Ms31 (66 kDa, Protein from Polytomella magna)
- Us5m (25 kDa, Protein from Polytomella magna)
- Ul18m (12 kDa, Protein from Polytomella magna)
- Ml40 (10 kDa, Protein from Polytomella magna)
- Mtlsu-7 (171 kDa, RNA from Polytomella magna)
- Mtssu-4 (108 kDa, RNA from Polytomella magna)
- Us13m (12 kDa, Protein from Polytomella magna)
- Mtssu-1 (32 kDa, RNA from Polytomella magna)
- Unknown (4 kDa, Protein from Polytomella magna)
- Us12m (13 kDa, Protein from Polytomella magna)
55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
Release date: June 14, 2023
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8oin
Q-score: 0.384
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8oin
Q-score: 0.384
Saurer M, Leibundgut M, Nadimpalli HP, Scaiola A, Schonhut T, Lee RG, Siira SJ, Rackham O, Dreos R, Lenarcic T, Kummer E, Gatfield D, Filipovska A, Ban N
Science (2023) 380 pp. 531-536 [ DOI: doi:10.1126/science.adf9890 Pubmed: 37141370 ]
Sample:
- Zinc ion (65 Da, Ligand)
- Ul16m (28 kDa, Protein from Sus scrofa)
- N-formylmethionine (177 Da, Ligand)
- Small ribosomal subunit protein ms29 (46 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l13, mitochondrial (22 kDa, Protein from Sus scrofa)
- 12s rrna (308 kDa, RNA from Sus scrofa)
- Us9m (45 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l40 (19 kDa, Protein from Sus scrofa)
- Ml54 (15 kDa, Protein from Sus scrofa)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- 28s ribosomal protein s15, mitochondrial (29 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l15, mitochondrial (33 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s31, mitochondrial (43 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l23, mitochondrial (17 kDa, Protein from Sus scrofa)
- Spermidine (145 Da, Ligand)
- 28s ribosomal protein s16, mitochondrial (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s25 (19 kDa, Protein from Sus scrofa)
- Ul24m (24 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l57 (12 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l41, mitochondrial (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s26 (23 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l2 (33 kDa, Protein from Sus scrofa)
- Mrpl34 (18 kDa, Protein from Sus scrofa)
- Ribosomal protein (10 kDa, Protein from Sus scrofa)
- Ict1 (43 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l39 (38 kDa, Protein from Sus scrofa)
- Ml62 (ict1) (23 kDa, Protein from Sus scrofa)
- Small ribosomal subunit protein ms38 (22 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l52, mitochondrial (17 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s24 (18 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s2 (31 kDa, Protein from Sus scrofa)
- Potassium ion (39 Da, Ligand)
- Mitochondrial ribosomal protein s34 (55 kDa, Protein from Sus scrofa)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- 28s ribosomal protein s18b, mitochondrial (29 kDa, Protein from Sus scrofa)
- E-site trna (894 Da, RNA from Sus scrofa)
- Cp phe-trna (23 kDa, RNA from Sus scrofa)
- Ml64 (25 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l1, mitochondrial (34 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l11 (20 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l53 (12 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l10 (29 kDa, Protein from Sus scrofa)
- Spermine (202 Da, Ligand)
- Ms23 (21 kDa, Protein from Sus scrofa)
- Large ribosomal subunit protein ml51 (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l32 (23 kDa, Protein from Sus scrofa)
- Large ribosomal subunit protein bl34m (10 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s22 (43 kDa, Protein from Sus scrofa)
- Water (18 Da, Ligand)
- 55s mammalian mitochondrial ribosome with mtrf1 and p-site trna (2 MDa, Complex from Sus scrofa)
- Large ribosomal subunit protein ul30m (18 kDa, Protein from Sus scrofa)
- Ml42 (16 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l48, mitochondrial (29 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l14 (34 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l50 (22 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s27 (45 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s35, mitochondrial isoform 1 (41 kDa, Protein from Sus scrofa)
- Large ribosomal subunit protein bl33m (7 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s10 (23 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l55 (15 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l27, mitochondrial (15 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s17, mitochondrial (14 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l18 (21 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l47 (29 kDa, Protein from Sus scrofa)
- Ml44 (37 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l21 (23 kDa, Protein from Sus scrofa)
- 39s ribosomal protein s30, mitochondrial (49 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l35, mitochondrial (21 kDa, Protein from Sus scrofa)
- Large ribosomal subunit protein ml43 (17 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s21, mitochondrial (10 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s33 (16 kDa, Protein from Sus scrofa)
- 28s ribosomal protein s5, mitochondrial isoform x2 (48 kDa, Protein from Sus scrofa)
- Mitoribosomal protein ms28, mrps28 (21 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l46 (32 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s7 (28 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l20 (17 kDa, Protein from Sus scrofa)
- Bl17m (19 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l45 (35 kDa, Protein from Sus scrofa)
- P-site met-trna(fmet) (22 kDa, RNA from Homo sapiens)
- Mitochondrial ribosomal protein l9 (30 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l38 (44 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l4 (33 kDa, Protein from Sus scrofa)
- Mrna (2 kDa, RNA from Homo sapiens)
- Peptide chain release factor 1, mitochondrial (55 kDa, Protein from Homo sapiens)
- Mitochondrial ribosomal protein l12 (21 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l37 (47 kDa, Protein from Sus scrofa)
- Ms39 (78 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s18c (16 kDa, Protein from Sus scrofa)
- Mitoribosomal protein bs6m, mrps6 (14 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s14 (15 kDa, Protein from Sus scrofa)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Large ribosomal subunit protein ul22m (24 kDa, Protein from Sus scrofa)
- Magnesium ion (24 Da, Ligand)
- 16s rrna (504 kDa, RNA from Sus scrofa)
- 39s ribosomal protein l19, mitochondrial (34 kDa, Protein from Sus scrofa)
- Phenylalanine (165 Da, Ligand)
- Coiled-coil-helix-coiled-coil-helix domain containing 1 (13 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s11 (20 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l28 (30 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s18a (22 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s12 (15 kDa, Protein from Sus scrofa)
39S mammalian mitochondrial large ribosomal subunit with mtRF1 and P-site tRNA
Release date: June 14, 2023
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8oiq
Q-score: 0.44
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8oiq
Q-score: 0.44
Saurer M, Leibundgut M, Nadimpalli HP, Scaiola A, Schonhut T, Lee RG, Siira SJ, Rackham O, Dreos R, Lenarcic T, Kummer E, Gatfield D, Filipovska A, Ban N
Science (2023) 380 pp. 531-536 [ DOI: doi:10.1126/science.adf9890 Pubmed: 37141370 ]
Sample:
- 39s ribosomal protein l49, mitochondrial (18 kDa, Protein from Sus scrofa)
- Ict1 (43 kDa, Protein from Sus scrofa)
- Zinc ion (65 Da, Ligand)
- Large ribosomal subunit protein ul30m (18 kDa, Protein from Sus scrofa)
- Ml42 (16 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l48, mitochondrial (29 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l14 (34 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l50 (22 kDa, Protein from Sus scrofa)
- Bl17m (19 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l39 (38 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l45 (35 kDa, Protein from Sus scrofa)
- Ml62 (ict1) (23 kDa, Protein from Sus scrofa)
- Ul16m (28 kDa, Protein from Sus scrofa)
- P-site met-trna(fmet) (22 kDa, RNA from Homo sapiens)
- N-formylmethionine (177 Da, Ligand)
- Mitochondrial ribosomal protein l9 (30 kDa, Protein from Sus scrofa)
- Large ribosomal subunit protein bl33m (7 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l52, mitochondrial (17 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l38 (44 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l13, mitochondrial (22 kDa, Protein from Sus scrofa)
- Potassium ion (39 Da, Ligand)
- Mitochondrial ribosomal protein l4 (33 kDa, Protein from Sus scrofa)
- Peptide chain release factor 1, mitochondrial (55 kDa, Protein from Homo sapiens)
- Mitochondrial ribosomal protein l12 (21 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l55 (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l37 (47 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l40 (19 kDa, Protein from Sus scrofa)
- Ml54 (15 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l27, mitochondrial (15 kDa, Protein from Sus scrofa)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- E-site trna (894 Da, RNA from Sus scrofa)
- Cp phe-trna (23 kDa, RNA from Sus scrofa)
- Mitochondrial ribosomal protein l18 (21 kDa, Protein from Sus scrofa)
- Large ribosomal subunit protein ul22m (24 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l47 (29 kDa, Protein from Sus scrofa)
- Ml64 (25 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l1, mitochondrial (34 kDa, Protein from Sus scrofa)
- Ml44 (37 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l15, mitochondrial (33 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l21 (23 kDa, Protein from Sus scrofa)
- Magnesium ion (24 Da, Ligand)
- 39s ribosomal protein l23, mitochondrial (17 kDa, Protein from Sus scrofa)
- 16s rrna (504 kDa, RNA from Sus scrofa)
- Mitochondrial ribosomal protein l11 (20 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l19, mitochondrial (34 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l53 (12 kDa, Protein from Sus scrofa)
- Phenylalanine (165 Da, Ligand)
- 39s ribosomal protein s30, mitochondrial (49 kDa, Protein from Sus scrofa)
- Ul24m (24 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l35, mitochondrial (21 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l10 (29 kDa, Protein from Sus scrofa)
- Large ribosomal subunit protein ml43 (17 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l28 (30 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l57 (12 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l32 (23 kDa, Protein from Sus scrofa)
- 39s mammalian mitochondrial ribosome with mtrf1 and p-site trnamet (1 MDa, Complex from Sus scrofa)
- Large ribosomal subunit protein bl34m (10 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l2 (33 kDa, Protein from Sus scrofa)
- 39s ribosomal protein l41, mitochondrial (15 kDa, Protein from Sus scrofa)
- Large ribosomal subunit protein ml51 (15 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein s18a (22 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l46 (32 kDa, Protein from Sus scrofa)
- Mitochondrial ribosomal protein l20 (17 kDa, Protein from Sus scrofa)
- Ribosomal protein (10 kDa, Protein from Sus scrofa)
Structure of the mitochondrial ribosome from Polytomella magna
Release date: Nov. 16, 2022
Resolution: 2.91 Å
EM Method: Single-particle
Fitted PDBs: 8a22
Q-score: 0.438
Resolution: 2.91 Å
EM Method: Single-particle
Fitted PDBs: 8a22
Q-score: 0.438
Tobiasson V, Berzina I, Amunts A
Nat Commun (2022) 13 pp. 6132-6132 [ Pubmed: 36253367 DOI: doi:10.1038/s41467-022-33582-5 ]
Sample:
- Unknown (6 kDa, Protein from Polytomella magna)
- Ul30m (20 kDa, Protein from Polytomella magna)
- Ms106 (18 kDa, Protein from Polytomella magna)
- Us10m (45 kDa, Protein from Polytomella magna)
- Ml43 (14 kDa, Protein from Polytomella magna)
- Ms114 (15 kDa, Protein from Polytomella magna)
- Ml127 (16 kDa, Protein from Polytomella magna)
- Ml116 (46 kDa, Protein from Polytomella magna)
- Bl28m (15 kDa, Protein from Polytomella magna)
- Mtlsu-8 (112 kDa, RNA from Polytomella magna)
- Ml105 (15 kDa, Protein from Polytomella magna)
- Ul14m (13 kDa, Protein from Polytomella magna)
- Us4m (25 kDa, Protein from Polytomella magna)
- Mtlsu-5 (45 kDa, RNA from Polytomella magna)
- Water (18 Da, Ligand)
- Ml46 (20 kDa, Protein from Polytomella magna)
- Ms33 (9 kDa, Protein from Polytomella magna)
- Ms109 (18 kDa, Protein from Polytomella magna)
- Ml120 (22 kDa, Protein from Polytomella magna)
- Ms45 (30 kDa, Protein from Polytomella magna)
- Bs18m (10 kDa, Protein from Polytomella magna)
- Bl24m (13 kDa, Protein from Polytomella magna)
- Bs19m (10 kDa, Protein from Polytomella magna)
- Ms113 (7 kDa, Protein from Polytomella magna)
- Bl19m (19 kDa, Protein from Polytomella magna)
- Us4m-2 (fragment) (20 kDa, Protein from Polytomella magna)
- Bl36m (5 kDa, Protein from Polytomella magna)
- Ul2m (33 kDa, Protein from Polytomella magna)
- Ms108 (5 kDa, Protein from Polytomella magna)
- Bl17m (20 kDa, Protein from Polytomella magna)
- Ms38 (4 kDa, Protein from Polytomella magna)
- Unknown (1 kDa, Protein from Polytomella magna)
- Mtlsu-2 (26 kDa, RNA from Polytomella magna)
- Bs1m (27 kDa, Protein from Polytomella magna)
- Potassium ion (39 Da, Ligand)
- Ul23m (18 kDa, Protein from Polytomella magna)
- Mtssu-3 (122 kDa, RNA from Polytomella magna)
- Ml123 (45 kDa, Protein from Polytomella magna)
- Ul5m (21 kDa, Protein from Polytomella magna)
- Ul15m (22 kDa, Protein from Polytomella magna)
- Bl20m (13 kDa, Protein from Polytomella magna)
- Unknown (2 kDa, Protein from Polytomella magna)
- Unknown (6 kDa, Protein from Polytomella magna)
- Us14m (13 kDa, Protein from Polytomella magna)
- Ul13m (21 kDa, Protein from Polytomella magna)
- Ml41 (10 kDa, Protein from Polytomella magna)
- Us3m-2 (fragment) (12 kDa, Protein from Polytomella magna)
- Ml129 (8 kDa, Protein from Polytomella magna)
- Unknown (1 kDa, Protein from Polytomella magna)
- Us8m (43 kDa, Protein from Polytomella magna)
- Bl21m (22 kDa, Protein from Polytomella magna)
- Us2m (26 kDa, Protein from Polytomella magna)
- Ms110 (11 kDa, Protein from Polytomella magna)
- Ms107 (42 kDa, Protein from Polytomella magna)
- Ul9m (6 kDa, Protein from Polytomella magna)
- Ul4m (33 kDa, Protein from Polytomella magna)
- Unknown (2 kDa, Protein from Polytomella magna)
- Ml64 (14 kDa, Protein from Polytomella magna)
- Ml125 (22 kDa, Protein from Polytomella magna)
- Ml126 (44 kDa, Protein from Polytomella magna)
- Mtssu-2 (68 kDa, RNA from Polytomella magna)
- Bl33m (5 kDa, Protein from Polytomella magna)
- Ml63 (7 kDa, Protein from Polytomella magna)
- Us9m (32 kDa, Protein from Polytomella magna)
- Unknown (783 Da, Protein from Polytomella magna)
- Bl31m (6 kDa, Protein from Polytomella magna)
- Ms26 (19 kDa, Protein from Polytomella magna)
- Us7m-2 (fragment) (9 kDa, Protein from Polytomella magna)
- Bl31m (8 kDa, Protein from Polytomella magna)
- Bl25m (28 kDa, Protein from Polytomella magna)
- Us6m (13 kDa, Protein from Polytomella magna)
- Ml118 (40 kDa, Protein from Polytomella magna)
- Mtlsu-1 (35 kDa, RNA from Polytomella magna)
- Ul6m (27 kDa, Protein from Polytomella magna)
- Ms35 (19 kDa, Protein from Polytomella magna)
- Us3m (32 kDa, Protein from Polytomella magna)
- Magnesium ion (24 Da, Ligand)
- Ms112 (7 kDa, Protein from Polytomella magna)
- Mtlsu-3 (67 kDa, RNA from Polytomella magna)
- Ms116 (10 kDa, Protein from Polytomella magna)
- Us15m (18 kDa, Protein from Polytomella magna)
- Unknown (3 kDa, Protein from Polytomella magna)
- Bl35m (16 kDa, Protein from Polytomella magna)
- Us7m (12 kDa, Protein from Polytomella magna)
- Ul29m (14 kDa, Protein from Polytomella magna)
- Bs16m (14 kDa, Protein from Polytomella magna)
- Ul22m (21 kDa, Protein from Polytomella magna)
- Unknown (954 Da, Protein from Polytomella magna)
- Mtlsu-4 (23 kDa, RNA from Polytomella magna)
- Ms29 (39 kDa, Protein from Polytomella magna)
- Ms115 (40 kDa, Protein from Polytomella magna)
- Unknown (4 kDa, Protein from Polytomella magna)
- Ml121 (27 kDa, Protein from Polytomella magna)
- Ul16m (19 kDa, Protein from Polytomella magna)
- Ms34 (14 kDa, Protein from Polytomella magna)
- Ms23 (19 kDa, Protein from Polytomella magna)
- Bs21m (8 kDa, Protein from Polytomella magna)
- Ms111 (17 kDa, Protein from Polytomella magna)
- Ul3m (34 kDa, Protein from Polytomella magna)
- Ml128 (2 kDa, Protein from Polytomella magna)
- Ml124 (52 kDa, Protein from Polytomella magna)
- Mt-5s (22 kDa, RNA from Polytomella magna)
- Bl34m (6 kDa, Protein from Polytomella magna)
- Us11m (12 kDa, Protein from Polytomella magna)
- Mtlsu-6 (42 kDa, RNA from Polytomella magna)
- Zinc ion (65 Da, Ligand)
- Us17m (15 kDa, Protein from Polytomella magna)
- Ml87 (16 kDa, Protein from Polytomella magna)
- Ml122 (7 kDa, Protein from Polytomella magna)
- Ms37 (9 kDa, Protein from Polytomella magna)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Bl27m (16 kDa, Protein from Polytomella magna)
- Ms31 (66 kDa, Protein from Polytomella magna)
- Us5m (25 kDa, Protein from Polytomella magna)
- Mtlsu-7 (185 kDa, RNA from Polytomella magna)
- Ul18m (12 kDa, Protein from Polytomella magna)
- Mitochondrial ribosome from polytomella magna (Complex from Polytomella magna)
- Ml40 (10 kDa, Protein from Polytomella magna)
- Us13m (12 kDa, Protein from Polytomella magna)
- Mtssu-4 (112 kDa, RNA from Polytomella magna)
- Mtssu-1 (32 kDa, RNA from Polytomella magna)
- Unknown (4 kDa, Protein from Polytomella magna)
- Us12m (13 kDa, Protein from Polytomella magna)
Structure of the mitochondrial ribosome from Polytomella magna with tRNA bound to the P site
Release date: Nov. 16, 2022
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8apn
Q-score: 0.399
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8apn
Q-score: 0.399
Tobiasson V, Berzina I, Amunts A
Nat Commun (2022) 13 pp. 6132-6132 [ Pubmed: 36253367 DOI: doi:10.1038/s41467-022-33582-5 ]
Sample:
- Mtlsu-3 (66 kDa, RNA from Polytomella magna)
- Ul30m (20 kDa, Protein from Polytomella magna)
- Ms106 (18 kDa, Protein from Polytomella magna)
- Ml116 (46 kDa, Protein from Polytomella magna)
- Us10m (45 kDa, Protein from Polytomella magna)
- Us4m-2 (20 kDa, Protein from Polytomella magna)
- Ml43 (14 kDa, Protein from Polytomella magna)
- Ms114 (15 kDa, Protein from Polytomella magna)
- Ml127 (16 kDa, Protein from Polytomella magna)
- Ml116 (46 kDa, Protein from Polytomella magna)
- Bl28m (15 kDa, Protein from Polytomella magna)
- Mtlsu-8 (112 kDa, RNA from Polytomella magna)
- Us4m (25 kDa, Protein from Polytomella magna)
- Mtlsu-6 (35 kDa, RNA from Polytomella magna)
- Water (18 Da, Ligand)
- Ml46 (20 kDa, Protein from Polytomella magna)
- Bl32m (6 kDa, Protein from Polytomella magna)
- Ms33 (9 kDa, Protein from Polytomella magna)
- Ms109 (18 kDa, Protein from Polytomella magna)
- Us3m-2 (12 kDa, Protein from Polytomella magna)
- Ml120 (22 kDa, Protein from Polytomella magna)
- Ms45 (30 kDa, Protein from Polytomella magna)
- Bs18m (10 kDa, Protein from Polytomella magna)
- Bl24m (13 kDa, Protein from Polytomella magna)
- P-site trna (23 kDa, RNA from Polytomella magna)
- Bs19m (10 kDa, Protein from Polytomella magna)
- Ms113 (7 kDa, Protein from Polytomella magna)
- Bl19m (19 kDa, Protein from Polytomella magna)
- Bl36m (5 kDa, Protein from Polytomella magna)
- Ul2m (33 kDa, Protein from Polytomella magna)
- Us7m-2 (9 kDa, Protein from Polytomella magna)
- Mrna (1 kDa, RNA from Polytomella magna)
- Ms108 (5 kDa, Protein from Polytomella magna)
- Bl17m (20 kDa, Protein from Polytomella magna)
- Ms38 (4 kDa, Protein from Polytomella magna)
- Unknown (1 kDa, Protein from Polytomella magna)
- Mtlsu-2 (26 kDa, RNA from Polytomella magna)
- Bs1m (27 kDa, Protein from Polytomella magna)
- Potassium ion (39 Da, Ligand)
- Ul23m (18 kDa, Protein from Polytomella magna)
- Mtssu-3 (122 kDa, RNA from Polytomella magna)
- Ml123 (45 kDa, Protein from Polytomella magna)
- Ul5m (21 kDa, Protein from Polytomella magna)
- Ul15m (22 kDa, Protein from Polytomella magna)
- Bl20m (13 kDa, Protein from Polytomella magna)
- Unknown (2 kDa, Protein from Polytomella magna)
- Us14m (13 kDa, Protein from Polytomella magna)
- Ul13m (21 kDa, Protein from Polytomella magna)
- Ml41 (10 kDa, Protein from Polytomella magna)
- Ml129 (8 kDa, Protein from Polytomella magna)
- Unknown (1 kDa, Protein from Polytomella magna)
- Us8m (43 kDa, Protein from Polytomella magna)
- Bl21m (22 kDa, Protein from Polytomella magna)
- Mtssu-2 (67 kDa, RNA from Polytomella magna)
- Us2m (26 kDa, Protein from Polytomella magna)
- Ms110 (11 kDa, Protein from Polytomella magna)
- Ms107 (42 kDa, Protein from Polytomella magna)
- Ul9m (6 kDa, Protein from Polytomella magna)
- Mtlsu-5 (43 kDa, RNA from Polytomella magna)
- Ul4m (33 kDa, Protein from Polytomella magna)
- Unknown (2 kDa, Protein from Polytomella magna)
- Ml64 (14 kDa, Protein from Polytomella magna)
- Ml125 (22 kDa, Protein from Polytomella magna)
- Ml126 (44 kDa, Protein from Polytomella magna)
- Bl33m (5 kDa, Protein from Polytomella magna)
- Ml63 (7 kDa, Protein from Polytomella magna)
- Unknown (5 kDa, Protein from Polytomella magna)
- Us9m (32 kDa, Protein from Polytomella magna)
- Unknown (783 Da, Protein from Polytomella magna)
- Ms26 (19 kDa, Protein from Polytomella magna)
- Bl31m (8 kDa, Protein from Polytomella magna)
- Bl25m (28 kDa, Protein from Polytomella magna)
- Us6m (13 kDa, Protein from Polytomella magna)
- Ml118 (40 kDa, Protein from Polytomella magna)
- Mtlsu-1 (35 kDa, RNA from Polytomella magna)
- Ul6m (27 kDa, Protein from Polytomella magna)
- Ms35 (19 kDa, Protein from Polytomella magna)
- Us3m (32 kDa, Protein from Polytomella magna)
- Magnesium ion (24 Da, Ligand)
- Ms112 (7 kDa, Protein from Polytomella magna)
- Ms116 (10 kDa, Protein from Polytomella magna)
- Us15m (18 kDa, Protein from Polytomella magna)
- Unknown (3 kDa, Protein from Polytomella magna)
- Bl35m (16 kDa, Protein from Polytomella magna)
- Us7m (12 kDa, Protein from Polytomella magna)
- Ul29m (14 kDa, Protein from Polytomella magna)
- Bs16m (14 kDa, Protein from Polytomella magna)
- Ul22m (21 kDa, Protein from Polytomella magna)
- Unknown (954 Da, Protein from Polytomella magna)
- Mtlsu-4 (23 kDa, RNA from Polytomella magna)
- Ms29 (39 kDa, Protein from Polytomella magna)
- Ms115 (40 kDa, Protein from Polytomella magna)
- Unknown (4 kDa, Protein from Polytomella magna)
- Ml121 (27 kDa, Protein from Polytomella magna)
- Ul16m (19 kDa, Protein from Polytomella magna)
- Ms34 (14 kDa, Protein from Polytomella magna)
- Ms23 (19 kDa, Protein from Polytomella magna)
- Bs21m (8 kDa, Protein from Polytomella magna)
- Ms111 (17 kDa, Protein from Polytomella magna)
- Ul3m (34 kDa, Protein from Polytomella magna)
- Ml128 (2 kDa, Protein from Polytomella magna)
- Ml124 (52 kDa, Protein from Polytomella magna)
- Mt-5s (22 kDa, RNA from Polytomella magna)
- Bl34m (6 kDa, Protein from Polytomella magna)
- Us11m (12 kDa, Protein from Polytomella magna)
- Hypothetical protein (13 kDa, Protein from Polytomella magna)
- Mitochondrial ribosome from polytomella magna in complex with p-site trna as well as mrna (Complex from Polytomella magna)
- Ml105 (15 kDa, Protein from Polytomella magna)
- Unknown (6 kDa, Protein from Polytomella magna)
- Us17m (15 kDa, Protein from Polytomella magna)
- Zinc ion (65 Da, Ligand)
- Ml87 (16 kDa, Protein from Polytomella magna)
- Ml122 (7 kDa, Protein from Polytomella magna)
- Ms37 (9 kDa, Protein from Polytomella magna)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Bl27m (16 kDa, Protein from Polytomella magna)
- Ms31 (66 kDa, Protein from Polytomella magna)
- Us5m (25 kDa, Protein from Polytomella magna)
- Ul18m (12 kDa, Protein from Polytomella magna)
- Ml116 (43 kDa, Protein from Polytomella magna)
- Ml40 (10 kDa, Protein from Polytomella magna)
- Mtlsu-7 (171 kDa, RNA from Polytomella magna)
- Mtssu-4 (108 kDa, RNA from Polytomella magna)
- Us13m (12 kDa, Protein from Polytomella magna)
- Mtssu-1 (32 kDa, RNA from Polytomella magna)
- Unknown (4 kDa, Protein from Polytomella magna)
- Us12m (13 kDa, Protein from Polytomella magna)
Large subunit of the Chlamydomonas reinhardtii mitoribosome
Release date: June 15, 2022
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7pkt
Q-score: 0.486
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 7pkt
Q-score: 0.486
Waltz F, Salinas-Giege T, Englmeier R, Meichel H, Soufari H, Kuhn L, Pfeffer S, Forster F, Engel BD, Giege P, Drouard L, Hashem Y
Nat Commun (2021) 12 pp. 7176-7176 [ DOI: doi:10.1038/s41467-021-27200-z Pubmed: 34887394 ]
Sample:
- Mitochondrial ribosomal protein l13 (29 kDa, Protein from Chlamydomonas reinhardtii)
- Ribosomal_tl5_c domain-containing protein (38 kDa, Protein from Chlamydomonas reinhardtii)
- Bl35m (17 kDa, Protein from Chlamydomonas reinhardtii)
- L4 rrna (38 kDa, RNA from Chlamydomonas reinhardtii)
- Ribosomal_l16 domain-containing protein (27 kDa, Protein from Chlamydomonas reinhardtii)
- Ribosomal_l30 domain-containing protein (24 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l19 (33 kDa, Protein from Chlamydomonas reinhardtii)
- Kow domain-containing protein,ul24m (31 kDa, Protein from Chlamydomonas reinhardtii)
- Bl27m (18 kDa, Protein from Chlamydomonas reinhardtii)
- Unk2 (4 kDa, Protein from Chlamydomonas reinhardtii)
- L3b rrna (59 kDa, RNA from Chlamydomonas reinhardtii)
- Plastid ribosomal protein l6 (22 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l17,bl17m (21 kDa, Protein from Chlamydomonas reinhardtii)
- Ul5m (23 kDa, Protein from Chlamydomonas reinhardtii)
- Bl34m (29 kDa, Protein from Chlamydomonas reinhardtii)
- Ml40 (17 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l23 (25 kDa, Protein from Chlamydomonas reinhardtii)
- Ml41 (12 kDa, Protein from Chlamydomonas reinhardtii)
- L5 rrna (47 kDa, RNA from Chlamydomonas reinhardtii)
- Ml119 (36 kDa, Protein from Chlamydomonas reinhardtii)
- 50s ribosomal protein l20 (13 kDa, Protein from Chlamydomonas reinhardtii)
- Ml87 (23 kDa, Protein from Chlamydomonas reinhardtii)
- Zinc ion (65 Da, Ligand)
- Ribosomal_l2_c domain-containing protein (41 kDa, Protein from Chlamydomonas reinhardtii)
- Unk1 (2 kDa, Protein from Chlamydomonas reinhardtii)
- L1 rrna (51 kDa, RNA from Chlamydomonas reinhardtii)
- L2a rrna (27 kDa, RNA from Chlamydomonas reinhardtii)
- Ribosomal_l18e/l15p domain-containing protein (35 kDa, Protein from Chlamydomonas reinhardtii)
- L8 rrna (132 kDa, RNA from Chlamydomonas reinhardtii)
- Ul22m (39 kDa, Protein from Chlamydomonas reinhardtii)
- Ml59/64 (14 kDa, Protein from Chlamydomonas reinhardtii)
- Ul14m (13 kDa, Protein from Chlamydomonas reinhardtii)
- Ml63/57/60 (14 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l33 (6 kDa, Protein from Chlamydomonas reinhardtii)
- Ml114 (48 kDa, Protein from Chlamydomonas reinhardtii)
- Bl21m (40 kDa, Protein from Chlamydomonas reinhardtii)
- Ml115 (72 kDa, Protein from Chlamydomonas reinhardtii)
- Mitochondrial ribosomal protein l17 (27 kDa, Protein from Chlamydomonas reinhardtii)
- Ml117 (75 kDa, Protein from Chlamydomonas reinhardtii)
- Ml118 (64 kDa, Protein from Chlamydomonas reinhardtii)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Ul3m (44 kDa, Protein from Chlamydomonas reinhardtii)
- L3a rrna (5s) (24 kDa, RNA from Chlamydomonas reinhardtii)
- Bl36m (3 kDa, Protein from Chlamydomonas reinhardtii)
- Ml43 (16 kDa, Protein from Chlamydomonas reinhardtii)
- Ml116 (53 kDa, Protein from Chlamydomonas reinhardtii)
- Ml80 (27 kDa, Protein from Chlamydomonas reinhardtii)
- Ppr* (14 kDa, Protein from Chlamydomonas reinhardtii)
- L6 rrna (43 kDa, RNA from Chlamydomonas reinhardtii)
- Ul4m (45 kDa, Protein from Chlamydomonas reinhardtii)
- Ml113 (84 kDa, Protein from Chlamydomonas reinhardtii)
- L7 rrna (186 kDa, RNA from Chlamydomonas reinhardtii)
- Large subunit of the mitochondrial ribosome of chlamydomonas reinhardtii (Complex from Chlamydomonas reinhardtii)
- Bl28m (17 kDa, Protein from Chlamydomonas reinhardtii)
- Ul29m (14 kDa, Protein from Chlamydomonas reinhardtii)
- Bl32m (13 kDa, Protein from Chlamydomonas reinhardtii)
- 50s ribosomal protein l9, chloroplastic (30 kDa, Protein from Chlamydomonas reinhardtii)
Structure of the yeast mitochondrial ribosome - Class A
Release date: Feb. 15, 2017
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 5mrc
Q-score: 0.443
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 5mrc
Q-score: 0.443
Desai N, Brown A, Amunts A, Ramakrishnan V
Science (2017) 355 pp. 528-531 [ Pubmed: 28154081 DOI: doi:10.1126/science.aal2415 ]
Sample:
- Bs16m (13 kDa, Protein from Baker's yeast)
- Ul3m (27 kDa, Protein from Baker's yeast)
- Ul14m (14 kDa, Protein from Baker's yeast)
- Ul30m (9 kDa, Protein from Baker's yeast)
- Bl34m (5 kDa, Protein from Baker's yeast)
- Bl28m (25 kDa, Protein from Baker's yeast)
- Ms23 (27 kDa, Protein from Baker's yeast)
- Ul6m (21 kDa, Protein from Baker's yeast)
- Ms29 (45 kDa, Protein from Baker's yeast)
- Ms45 (36 kDa, Protein from Baker's yeast)
- Ml59 (18 kDa, Protein from Baker's yeast)
- Bl21m (13 kDa, Protein from Baker's yeast)
- Ms33 (11 kDa, Protein from Baker's yeast)
- Us13m (13 kDa, Protein from Baker's yeast)
- Us17m (27 kDa, Protein from Baker's yeast)
- Us8m (17 kDa, Protein from Baker's yeast)
- Ul24m (33 kDa, Protein from Baker's yeast)
- Ul16m (22 kDa, Protein from Baker's yeast)
- Ul4m (28 kDa, Protein from Baker's yeast)
- Ms35 (32 kDa, Protein from Baker's yeast)
- 15s ribosomal rna (528 kDa, RNA from Baker's yeast)
- Bl27m (39 kDa, Protein from Baker's yeast)
- Ml38 (40 kDa, Protein from Baker's yeast)
- Bl9m (8 kDa, Protein from Baker's yeast)
- Sodium ion (22 Da, Ligand)
- Us19m (9 kDa, Protein from Baker's yeast)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Bl32m (13 kDa, Protein from Baker's yeast)
- Bl17m (26 kDa, Protein from Baker's yeast)
- Ml41 (14 kDa, Protein from Baker's yeast)
- Ms38 (4 kDa, Protein from Baker's yeast)
- Ml58 (20 kDa, Protein from Baker's yeast)
- Us10m (21 kDa, Protein from Baker's yeast)
- Ms26 (26 kDa, Protein from Baker's yeast)
- 21s ribosomal rna (1 MDa, RNA from Baker's yeast)
- Us12m (13 kDa, Protein from Baker's yeast)
- Unknown protein sequence 2 (12 kDa, Protein from Baker's yeast)
- Us4m (56 kDa, Protein from Baker's yeast)
- Us7m (18 kDa, Protein from Baker's yeast)
- Ml46 (32 kDa, Protein from Baker's yeast)
- Ml40 (13 kDa, Protein from Baker's yeast)
- Ms44 (39 kDa, Protein from Baker's yeast)
- Ul13m (18 kDa, Protein from Baker's yeast)
- Ml49 (12 kDa, Protein from Baker's yeast)
- Bs21m (10 kDa, Protein from Baker's yeast)
- Ul23m (24 kDa, Protein from Baker's yeast)
- Bs6m (14 kDa, Protein from Baker's yeast)
- Bl31m (20 kDa, Protein from Baker's yeast)
- Us5m (33 kDa, Protein from Baker's yeast)
- Trna (24 kDa, RNA from Baker's yeast)
- Ul29m (26 kDa, Protein from Baker's yeast)
- Ms42 (29 kDa, Protein from Baker's yeast)
- Bl19m (17 kDa, Protein from Baker's yeast)
- Magnesium ion (24 Da, Ligand)
- Ul15m (24 kDa, Protein from Baker's yeast)
- Ms43 (36 kDa, Protein from Baker's yeast)
- Us11m (16 kDa, Protein from Baker's yeast)
- Unknown protein sequence 1 (8 kDa, Protein from Baker's yeast)
- Bs1m (39 kDa, Protein from Baker's yeast)
- Yeast mitochondrial ribosome - class a (Complex from Saccharomyces cerevisiae)
- Us9m (27 kDa, Protein from Baker's yeast)
- Ul22m (25 kDa, Protein from Baker's yeast)
- Ml57 (23 kDa, Protein from Baker's yeast)
- Us3m (47 kDa, Protein from Baker's yeast)
- Bl36m (4 kDa, Protein from Baker's yeast)
- Ml50 (30 kDa, Protein from Baker's yeast)
- Ml44 (36 kDa, Protein from Baker's yeast)
- Us2m (29 kDa, Protein from Baker's yeast)
- Ms47 (51 kDa, Protein from Baker's yeast)
- Zinc ion (65 Da, Ligand)
- Ml60 (14 kDa, Protein from Baker's yeast)
- Ul2m (43 kDa, Protein from Baker's yeast)
- Bl33m (7 kDa, Protein from Baker's yeast)
- Us14m (13 kDa, Protein from Baker's yeast)
- Ms41 (11 kDa, Protein from Baker's yeast)
- Ml67 (25 kDa, Protein from Baker's yeast)
- Ms46 (18 kDa, Protein from Baker's yeast)
- Ms37 (10 kDa, Protein from Baker's yeast)
- Bs18m (11 kDa, Protein from Baker's yeast)
- Ml43 (15 kDa, Protein from Baker's yeast)
- Ul5m (31 kDa, Protein from Baker's yeast)
- Bl35m (7 kDa, Protein from Baker's yeast)
- Us15m (29 kDa, Protein from Baker's yeast)
Structure of the yeast mitochondrial ribosome - Class B
Release date: Feb. 15, 2017
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 5mre
Q-score: 0.368
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 5mre
Q-score: 0.368
Desai N, Brown A, Amunts A, Ramakrishnan V
Science (2017) 355 pp. 528-531 [ Pubmed: 28154081 DOI: doi:10.1126/science.aal2415 ]
Sample:
- Bs6m (14 kDa, Protein from Saccharomyces cerevisiae)
- Us9m (27 kDa, Protein from Saccharomyces cerevisiae)
- Ms38 (4 kDa, Protein from Saccharomyces cerevisiae)
- Us19m (9 kDa, Protein from Saccharomyces cerevisiae)
- Bl21m (13 kDa, Protein from Saccharomyces cerevisiae)
- Ul16m (22 kDa, Protein from Saccharomyces cerevisiae)
- Ul5m (31 kDa, Protein from Saccharomyces cerevisiae)
- Ml50 (30 kDa, Protein from Saccharomyces cerevisiae)
- Ul4m (28 kDa, Protein from Saccharomyces cerevisiae)
- Bs1m (39 kDa, Protein from Saccharomyces cerevisiae)
- Ul29m (26 kDa, Protein from Saccharomyces cerevisiae)
- Yeast mitochondrial ribosome - class b (Complex from Saccharomyces cerevisiae)
- Bl27m (39 kDa, Protein from Saccharomyces cerevisiae)
- Ms41 (11 kDa, Protein from Saccharomyces cerevisiae)
- Unknown protein sequence 2 (12 kDa, Protein from Saccharomyces cerevisiae)
- Ul22m (25 kDa, Protein from Saccharomyces cerevisiae)
- Us17m (27 kDa, Protein from Saccharomyces cerevisiae)
- Us5m (33 kDa, Protein from Saccharomyces cerevisiae)
- Bs16m (13 kDa, Protein from Saccharomyces cerevisiae)
- Ms42 (29 kDa, Protein from Saccharomyces cerevisiae)
- Bl31m (20 kDa, Protein from Saccharomyces cerevisiae)
- Bl34m (5 kDa, Protein from Saccharomyces cerevisiae)
- Ul15m (24 kDa, Protein from Saccharomyces cerevisiae)
- Bs21m (10 kDa, Protein from Saccharomyces cerevisiae)
- Ml57 (23 kDa, Protein from Saccharomyces cerevisiae)
- Ms47 (51 kDa, Protein from Saccharomyces cerevisiae)
- Ms44 (39 kDa, Protein from Saccharomyces cerevisiae)
- Us4m (56 kDa, Protein from Saccharomyces cerevisiae)
- Ms45 (36 kDa, Protein from Saccharomyces cerevisiae)
- Bl33m (7 kDa, Protein from Saccharomyces cerevisiae)
- Ms26 (26 kDa, Protein from Saccharomyces cerevisiae)
- Ul6m (21 kDa, Protein from Saccharomyces cerevisiae)
- Ml58 (20 kDa, Protein from Saccharomyces cerevisiae)
- Bl19m (17 kDa, Protein from Saccharomyces cerevisiae)
- Sodium ion (22 Da, Ligand)
- Trna (24 kDa, RNA from Saccharomyces cerevisiae)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Ml44 (36 kDa, Protein from Saccharomyces cerevisiae)
- Bl28m (25 kDa, Protein from Saccharomyces cerevisiae)
- Us12m (13 kDa, Protein from Saccharomyces cerevisiae)
- Us10m (21 kDa, Protein from Saccharomyces cerevisiae)
- Ul24m (33 kDa, Protein from Saccharomyces cerevisiae)
- Ms23 (27 kDa, Protein from Saccharomyces cerevisiae)
- Bl36m (4 kDa, Protein from Saccharomyces cerevisiae)
- Ml41 (14 kDa, Protein from Saccharomyces cerevisiae)
- Ul30m (9 kDa, Protein from Saccharomyces cerevisiae)
- Unknown protein sequence 1 (8 kDa, Protein from Saccharomyces cerevisiae)
- Ms29 (45 kDa, Protein from Saccharomyces cerevisiae)
- Ml49 (12 kDa, Protein from Saccharomyces cerevisiae)
- Us14m (13 kDa, Protein from Saccharomyces cerevisiae)
- Us15m (29 kDa, Protein from Saccharomyces cerevisiae)
- Ul23m (24 kDa, Protein from Saccharomyces cerevisiae)
- Us2m (29 kDa, Protein from Saccharomyces cerevisiae)
- Ul14m (14 kDa, Protein from Saccharomyces cerevisiae)
- Ml46 (32 kDa, Protein from Saccharomyces cerevisiae)
- Ms33 (11 kDa, Protein from Saccharomyces cerevisiae)
- Ml60 (14 kDa, Protein from Saccharomyces cerevisiae)
- Ul13m (18 kDa, Protein from Saccharomyces cerevisiae)
- Ml67 (25 kDa, Protein from Saccharomyces cerevisiae)
- 15s ribosomal rna (528 kDa, RNA from Saccharomyces cerevisiae)
- Us11m (16 kDa, Protein from Saccharomyces cerevisiae)
- Ml43 (15 kDa, Protein from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- Ml40 (13 kDa, Protein from Saccharomyces cerevisiae)
- Ul2m (43 kDa, Protein from Saccharomyces cerevisiae)
- Ms37 (10 kDa, Protein from Saccharomyces cerevisiae)
- Ml38 (40 kDa, Protein from Saccharomyces cerevisiae)
- Ml59 (18 kDa, Protein from Saccharomyces cerevisiae)
- Us7m (18 kDa, Protein from Saccharomyces cerevisiae)
- Bl35m (7 kDa, Protein from Saccharomyces cerevisiae)
- Us3m (47 kDa, Protein from Saccharomyces cerevisiae)
- 21s ribosomal rna (1 MDa, RNA from Saccharomyces cerevisiae)
- Ms43 (36 kDa, Protein from Saccharomyces cerevisiae)
- Bl17m (26 kDa, Protein from Saccharomyces cerevisiae)
- Bl9m (8 kDa, Protein from Saccharomyces cerevisiae)
- Ms35 (32 kDa, Protein from Saccharomyces cerevisiae)
- Us13m (13 kDa, Protein from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- Us8m (17 kDa, Protein from Saccharomyces cerevisiae)
- Ms46 (18 kDa, Protein from Saccharomyces cerevisiae)
- Bs18m (11 kDa, Protein from Saccharomyces cerevisiae)
- Ul3m (27 kDa, Protein from Saccharomyces cerevisiae)
- Bl32m (13 kDa, Protein from Saccharomyces cerevisiae)
Structure of the yeast mitochondrial ribosome - Class C
Release date: Feb. 15, 2017
Resolution: 4.97 Å
EM Method: Single-particle
Fitted PDBs: 5mrf
Q-score: 0.241
Resolution: 4.97 Å
EM Method: Single-particle
Fitted PDBs: 5mrf
Q-score: 0.241
Desai N, Brown A, Amunts A, Ramakrishnan V
Science (2017) 355 pp. 528-531 [ Pubmed: 28154081 DOI: doi:10.1126/science.aal2415 ]
Sample:
- Bs6m (14 kDa, Protein from Saccharomyces cerevisiae)
- Us9m (27 kDa, Protein from Saccharomyces cerevisiae)
- Ms38 (4 kDa, Protein from Saccharomyces cerevisiae)
- Us19m (9 kDa, Protein from Saccharomyces cerevisiae)
- Bl21m (13 kDa, Protein from Saccharomyces cerevisiae)
- Ul16m (22 kDa, Protein from Saccharomyces cerevisiae)
- Ul5m (31 kDa, Protein from Saccharomyces cerevisiae)
- Ml50 (30 kDa, Protein from Saccharomyces cerevisiae)
- Ul4m (28 kDa, Protein from Saccharomyces cerevisiae)
- Bs1m (39 kDa, Protein from Saccharomyces cerevisiae)
- Ul29m (26 kDa, Protein from Saccharomyces cerevisiae)
- Bl27m (39 kDa, Protein from Saccharomyces cerevisiae)
- Ms41 (11 kDa, Protein from Saccharomyces cerevisiae)
- Unknown protein sequence 2 (12 kDa, Protein from Saccharomyces cerevisiae)
- Ul22m (25 kDa, Protein from Saccharomyces cerevisiae)
- Us17m (27 kDa, Protein from Saccharomyces cerevisiae)
- Us5m (33 kDa, Protein from Saccharomyces cerevisiae)
- Bs16m (13 kDa, Protein from Saccharomyces cerevisiae)
- Ms42 (29 kDa, Protein from Saccharomyces cerevisiae)
- Bl31m (20 kDa, Protein from Saccharomyces cerevisiae)
- Bl34m (5 kDa, Protein from Saccharomyces cerevisiae)
- Ul15m (24 kDa, Protein from Saccharomyces cerevisiae)
- Bs21m (10 kDa, Protein from Saccharomyces cerevisiae)
- Ml57 (23 kDa, Protein from Saccharomyces cerevisiae)
- Ms47 (51 kDa, Protein from Saccharomyces cerevisiae)
- Ms44 (39 kDa, Protein from Saccharomyces cerevisiae)
- Us4m (56 kDa, Protein from Saccharomyces cerevisiae)
- Ms45 (36 kDa, Protein from Saccharomyces cerevisiae)
- Bl33m (7 kDa, Protein from Saccharomyces cerevisiae)
- Ms26 (26 kDa, Protein from Saccharomyces cerevisiae)
- Ul6m (21 kDa, Protein from Saccharomyces cerevisiae)
- Ml58 (20 kDa, Protein from Saccharomyces cerevisiae)
- Bl19m (17 kDa, Protein from Saccharomyces cerevisiae)
- Sodium ion (22 Da, Ligand)
- Trna (24 kDa, RNA from Saccharomyces cerevisiae)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Ml44 (36 kDa, Protein from Saccharomyces cerevisiae)
- Bl28m (25 kDa, Protein from Saccharomyces cerevisiae)
- Us12m (13 kDa, Protein from Saccharomyces cerevisiae)
- Us10m (21 kDa, Protein from Saccharomyces cerevisiae)
- Ul24m (33 kDa, Protein from Saccharomyces cerevisiae)
- Ms23 (27 kDa, Protein from Saccharomyces cerevisiae)
- Bl36m (4 kDa, Protein from Saccharomyces cerevisiae)
- Ml41 (14 kDa, Protein from Saccharomyces cerevisiae)
- Ul30m (9 kDa, Protein from Saccharomyces cerevisiae)
- Unknown protein sequence 1 (8 kDa, Protein from Saccharomyces cerevisiae)
- Ms29 (45 kDa, Protein from Saccharomyces cerevisiae)
- Ml49 (12 kDa, Protein from Saccharomyces cerevisiae)
- Us14m (13 kDa, Protein from Saccharomyces cerevisiae)
- Us15m (29 kDa, Protein from Saccharomyces cerevisiae)
- Ul23m (24 kDa, Protein from Saccharomyces cerevisiae)
- Us2m (29 kDa, Protein from Saccharomyces cerevisiae)
- Ul14m (14 kDa, Protein from Saccharomyces cerevisiae)
- Ml46 (32 kDa, Protein from Saccharomyces cerevisiae)
- Ms33 (11 kDa, Protein from Saccharomyces cerevisiae)
- Ml60 (14 kDa, Protein from Saccharomyces cerevisiae)
- Ul13m (18 kDa, Protein from Saccharomyces cerevisiae)
- Ml67 (25 kDa, Protein from Saccharomyces cerevisiae)
- 15s ribosomal rna (528 kDa, RNA from Saccharomyces cerevisiae)
- Us11m (16 kDa, Protein from Saccharomyces cerevisiae)
- Yeast mitochondrial ribosome - class c (Complex from Saccharomyces cerevisiae)
- Ml43 (15 kDa, Protein from Saccharomyces cerevisiae)
- Magnesium ion (24 Da, Ligand)
- Ml40 (13 kDa, Protein from Saccharomyces cerevisiae)
- Ul2m (43 kDa, Protein from Saccharomyces cerevisiae)
- Ms37 (10 kDa, Protein from Saccharomyces cerevisiae)
- Ml38 (40 kDa, Protein from Saccharomyces cerevisiae)
- Ml59 (18 kDa, Protein from Saccharomyces cerevisiae)
- Us7m (18 kDa, Protein from Saccharomyces cerevisiae)
- Bl35m (7 kDa, Protein from Saccharomyces cerevisiae)
- Us3m (47 kDa, Protein from Saccharomyces cerevisiae)
- 21s ribosomal rna (1 MDa, RNA from Saccharomyces cerevisiae)
- Ms43 (36 kDa, Protein from Saccharomyces cerevisiae)
- Bl17m (26 kDa, Protein from Saccharomyces cerevisiae)
- Bl9m (8 kDa, Protein from Saccharomyces cerevisiae)
- Ms35 (32 kDa, Protein from Saccharomyces cerevisiae)
- Us13m (13 kDa, Protein from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- Us8m (17 kDa, Protein from Saccharomyces cerevisiae)
- Ms46 (18 kDa, Protein from Saccharomyces cerevisiae)
- Bs18m (11 kDa, Protein from Saccharomyces cerevisiae)
- Ul3m (27 kDa, Protein from Saccharomyces cerevisiae)
- Bl32m (13 kDa, Protein from Saccharomyces cerevisiae)