Atopobium rimae

Taxonomy
Taxonomy database identifier: 1383
Superkingdom Bacteria
Phylum Firmicutes
Class Actinobacteria
Subclass Coriobacteridae
Order Coriobacteriales
Suborder Coriobacterineae
Family Coriobacteriaceae
Genus Atopobium
Species rimae
Peptidase View peptidase sequences from Atopobium rimae
Count of known and putative peptidases: 26, non-peptidase homologues 6
Completely sequences genomes from subspecies and strains Protein coding genes

To show all strains with completely sequenced genomes, click here.

Clan Family MEROPS ID Peptidase or homologue (subtype) MERNUM Gene Link Locus Megabases
AC A8 non-peptidase homologue family A8 non-peptidase homologues MER0401555 lspA ATORI0001_0192
AD A24 unassigned subfamily A24A unassigned peptidases MER0624545 ATORI0001_1573
CA C1 C01.086 aminopeptidase C MER0168781 ATORI0001_0683
CA C1 unassigned subfamily C1B unassigned peptidases MER0168507 ATORI0001_0685
CF C15 C15.001 pyroglutamyl-peptidase I (prokaryote) MER0168834 pcp ATORI0001_1550
CL C60 unassigned subfamily C60B unassigned peptidases MER0300054
CL C82 unassigned subfamily C82A unassigned peptidases MER0186455 ATORI0001_0338
CO C40 unassigned family C40 unassigned peptidases MER0168731
MA M3 unassigned subfamily M3B unassigned peptidases MER0166517 pepF ATORI0001_1069
MA M32 unassigned family M32 unassigned peptidases MER0168887 ATORI0001_1584
MA M41 unassigned family M41 unassigned peptidases MER0363170 ftsH ATORI0001_0196
ME M16 unassigned subfamily M16C unassigned peptidases MER0166730 ATORI0001_0122
MG M24 unassigned subfamily M24A unassigned peptidases MER0166470 map ATORI0001_0876
MG M24 unassigned subfamily M24B unassigned peptidases MER0166934 ATORI0001_0210
MH M18 unassigned family M18 unassigned peptidases MER1168027
MH M18 unassigned family M18 unassigned peptidases MER1167853
MH M18 unassigned family M18 unassigned peptidases MER0168566 ATORI0001_0636
MH M18 unassigned family M18 unassigned peptidases MER0166878 ATORI0001_0082
MH M20 non-peptidase homologue subfamily M20A non-peptidase homologues MER0854529 ATORI0001_0125
MH M20 unassigned subfamily M20A unassigned peptidases MER0831541 ATORI0001_0452
MH M20 unassigned subfamily M20A unassigned peptidases MER0370070 ATORI0001_0047
MH M20 unassigned subfamily M20B unassigned peptidases MER0370720 pepT ATORI0001_1390
MH M20 unassigned subfamily M20B unassigned peptidases MER0166672 pepT ATORI0001_0074
MH M20 unassigned family M20 unassigned peptidases MER0852376 ATORI0001_0698
MH M20 unassigned family M20 unassigned peptidases MER0473118
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0865029 pyrC
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0871703 hydA
MJ M38 non-peptidase homologue family M38 non-peptidase homologues MER0874518 nagA
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0896148 ATORI0001_0489
MM M50 non-peptidase homologue subfamily M50B non-peptidase homologues MER0895938 ATORI0001_0499
MQ M29 unassigned family M29 unassigned peptidases MER0294207 ATORI0001_1232
PA S1 unassigned subfamily S1B unassigned peptidases MER0961687 ATORI0001_0707
PB C44 C44.001 amidophosphoribosyltransferase precursor MER0166414 purF ATORI0001_1287
PB C44 non-peptidase homologue family C44 non-peptidase homologues MER0166779
PB T2 unassigned family T2 unassigned peptidases MER0280745 ATORI0001_0699
PC C26 C26.957 GMP synthase MER0441347
PC C26 C26.964 CTP synthetase MER0451083 pyrG
PC C26 unassigned family C26 unassigned peptidases MER0448296
PC C56 non-peptidase homologue family C56 non-peptidase homologues MER0166829 ATORI0001_0168
PC S51 non-peptidase homologue family S51 non-peptidase homologues MER1357074
PC S51 unassigned family S51 unassigned peptidases MER0166624 ATORI0001_0981
PD N11 unassigned family N11 unassigned peptide lyases MER0195397 ATORI0001_1018
SB S8 unassigned subfamily S8A unassigned peptidases MER0247065 ATORI0001_1046
SE S11 unassigned family S11 unassigned peptidases MER0351935 ATORI0001_0450
SF S24 S24.001 repressor LexA MER0168448 lexA ATORI0001_0520
SF S24 non-peptidase homologue family S24 non-peptidase homologues MER1043426 ATORI0001_1208
SF S24 unassigned family S24 unassigned peptidases MER1042487 ATORI0001_1026
SF S26 S26.024 signal peptidase (Mycobacterium tuberculosis-type) MER0168622 lepB ATORI0001_0438
SK S14 S14.001 peptidase Clp (type 1) MER0358355 clpP ATORI0001_0570
SK S14 non-peptidase homologue family S14 non-peptidase homologues MER0166350 clpP ATORI0001_1180
U- U32 unassigned family U32 unassigned peptidases MER0168675 ATORI0001_0758

GENOME ANALYSIS: Comparison with 17 completely sequenced genomes from order Coriobacteriales
Family Comment
C60 significant decrease in homologues (1 homologues)
N11 significant presence (1 homologues)
T2 significant presence (1 homologues)