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Crystal structure of the hydroxynitrile lyase from almond

X-ray diffraction
1.47Å resolution
PDB entry 1ju2 coloured by chain, front view.
PDB entry 1ju2 coloured by chain, side view.
PDB entry 1ju2 coloured by chain, top view.
Source organism: Prunus dulcis
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: (R)-mandelonitrile lyase 2
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Multimeric state: monomeric
Accessible surface area: 19295.93 Å2
Buried surface area: 4799.67 Å2
Dissociation area: 128.67 Å2
Dissociation energy (ΔGdiss): -3.79 kcal/mol
Dissociation entropy (TΔSdiss): -0.38 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-188191
Assembly 2
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Assembly Name: (R)-mandelonitrile lyase 2
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Multimeric state: monomeric
Accessible surface area: 19135.07 Å2
Buried surface area: 4636.47 Å2
Dissociation area: 128.32 Å2
Dissociation energy (ΔGdiss): -3.76 kcal/mol
Dissociation entropy (TΔSdiss): -0.38 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-188191

Macromolecules

(R)-mandelonitrile lyase 2
Chains: A, B
Length: 536 amino acids
Theoretical weight: 58.09 KDa
Source organism: Prunus dulcis
UniProt:
  • Canonical: Q945K2 (Residues: 28-563; Coverage: 100%)
Gene names: HNL1, MDL2
Pfam:
InterPro:
CATH:
SCOP:
(R)-mandelonitrile lyase 2 in PDB entry 1ju2, assembly 1, front view.
(R)-mandelonitrile lyase 2 in PDB entry 1ju2, assembly 1, side view.
(R)-mandelonitrile lyase 2 in PDB entry 1ju2, assembly 1, top view.
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