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Structure of 4-Hydroxy-tetrahydrodipicolinate Reductase from Vibrio vulnificus with 2,6 Pyridine Dicarboxylic and NADH

X-ray diffraction
2.2Å resolution
PDB entry 5tem coloured by chain, front view.
PDB entry 5tem coloured by chain, side view.
PDB entry 5tem coloured by chain, top view.
Source organism: Vibrio vulnificus CMCP6
Assembly composition:
homo tetramer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: 4-hydroxy-tetrahydrodipicolinate reductase
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Multimeric state: homo tetramer
Accessible surface area: 38688.31 Å2
Buried surface area: 19004.55 Å2
Dissociation area: 2,600.16 Å2
Dissociation energy (ΔGdiss): 33.19 kcal/mol
Dissociation entropy (TΔSdiss): 15.08 kcal/mol
Symmetry number: 4
PDBe Complex ID: PDB-CPX-184046

Macromolecules

4-hydroxy-tetrahydrodipicolinate reductase
Chains: A, C
Length: 269 amino acids
Theoretical weight: 28.67 KDa
Source organism: Vibrio vulnificus CMCP6
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q8DEM0 (Residues: 1-269; Coverage: 100%)
Gene names: VV1_0567, dapB
Pfam:
InterPro:
CATH:
4-hydroxy-tetrahydrodipicolinate reductase in PDB entry 5tem, assembly 1, front view.
4-hydroxy-tetrahydrodipicolinate reductase in PDB entry 5tem, assembly 1, side view.
4-hydroxy-tetrahydrodipicolinate reductase in PDB entry 5tem, assembly 1, top view.
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