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Crystal structure of beta-1,2-glucooligosaccharide binding protein in complex with sophorotetraose

X-ray diffraction
1.6Å resolution
PDB entry 5yse coloured by chain, front view.
PDB entry 5yse coloured by chain, side view.
PDB entry 5yse coloured by chain, top view.
Source organism: Listeria innocua Clip11262
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Lin1841 protein
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Multimeric state: monomeric
Accessible surface area: 16924.18 Å2
Buried surface area: 2638.27 Å2
Dissociation area: 539.77 Å2
Dissociation energy (ΔGdiss): -6.39 kcal/mol
Dissociation entropy (TΔSdiss): 5.96 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-187845
Assembly 2
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Assembly Name: Lin1841 protein
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Multimeric state: monomeric
Accessible surface area: 16916.03 Å2
Buried surface area: 1520.84 Å2
Dissociation area: 536.63 Å2
Dissociation energy (ΔGdiss): -6.89 kcal/mol
Dissociation entropy (TΔSdiss): 5.95 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-187845

Macromolecules

Lin1841 protein
Chains: A, B
Length: 397 amino acids
Theoretical weight: 44.58 KDa
Source organism: Listeria innocua Clip11262
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q92AS8 (Residues: 27-414; Coverage: 99%)
Gene name: lin1841
Pfam: Bacterial extracellular solute-binding protein
InterPro: Bacterial-type extracellular solute-binding protein
CATH: Periplasmic binding protein-like II
Lin1841 protein in PDB entry 5yse, assembly 1, front view.
Lin1841 protein in PDB entry 5yse, assembly 1, side view.
Lin1841 protein in PDB entry 5yse, assembly 1, top view.
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