6th6

Electron Microscopy
2.55Å resolution

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero 63-mer (preferred)
PDBe Complex ID:
PDB-CPX-250348 (preferred)
Entry contents:
58 distinct polypeptide molecules
3 distinct RNA molecules
Macromolecules (61 distinct):
Small ribosomal subunit protein uS2 Chain: Ab
Molecule details ›
Chain: Ab
Length: 201 amino acids
Theoretical weight: 23.04 KDa
Source organism: Thermococcus kodakarensis KOD1
UniProt:
  • Canonical: Q5JJD2 (Residues: 1-201; Coverage: 100%)
Gene names: TK1496, rps2
Sequence domains: Ribosomal protein S2
Small ribosomal subunit protein uS3 Chain: Ac
Molecule details ›
Chain: Ac
Length: 209 amino acids
Theoretical weight: 23.39 KDa
Source organism: Thermococcus kodakarensis KOD1
UniProt:
  • Canonical: Q5JDH5 (Residues: 1-209; Coverage: 100%)
Gene names: TK1536, rps3
Sequence domains:
Small ribosomal subunit protein eS1 Chain: Ad
Small ribosomal subunit protein uS4 Chain: Ae
Small ribosomal subunit protein eS4 Chain: Af
Small ribosomal subunit protein uS5 Chain: Ag
Small ribosomal subunit protein eS6 Chain: Ah
Small ribosomal subunit protein uS7 Chain: Ai
Small ribosomal subunit protein uS8 Chain: Aj
Small ribosomal subunit protein eS8 Chain: Ak
Small ribosomal subunit protein uS9 Chain: Al
Small ribosomal subunit protein uS10 Chain: Am
Small ribosomal subunit protein uS11 Chain: An
Small ribosomal subunit protein uS12 Chain: Ao
Small ribosomal subunit protein uS13 Chain: Ap
Small ribosomal subunit protein uS15 Chain: Aq
Small ribosomal subunit protein uS14 Chain: Ar
Small ribosomal subunit protein uS17 Chain: As
Small ribosomal subunit protein eS17 Chain: At
Small ribosomal subunit protein uS19 Chain: Au
Small ribosomal subunit protein eS19 Chain: Av
Small ribosomal subunit protein eS24 Chain: Aw
Small ribosomal subunit protein eS27 Chain: Ax
Small ribosomal subunit protein eS28 Chain: Ay
Double zinc ribbon protein TK0111 Chain: Az
Large ribosomal subunit protein uL2 Chain: BC
Large ribosomal subunit protein uL3 Chain: BD
Large ribosomal subunit protein uL4 Chain: BE
Large ribosomal subunit protein uL5 Chain: BF
Large ribosomal subunit protein uL6 Chain: BG
Large ribosomal subunit protein eL8 Chains: BH, BI
Large ribosomal subunit protein uL16 Chain: BJ
Large ribosomal subunit protein uL13 Chain: BK
Large ribosomal subunit protein uL14 Chain: BL
Large ribosomal subunit protein eL14 Chains: BM, BN
Large ribosomal subunit protein uL15 Chain: BO
Large ribosomal subunit protein eL15 Chain: BP
Large ribosomal subunit protein uL18 Chain: BQ
Large ribosomal subunit protein eL18 Chain: BR
Large ribosomal subunit protein eL19 Chain: BS
Large ribosomal subunit protein eL20 Chain: BT
Large ribosomal subunit protein eL21 Chain: BU
Large ribosomal subunit protein uL22 Chain: BV
Large ribosomal subunit protein uL23 Chain: BW
Large ribosomal subunit protein uL24 Chain: BX
Large ribosomal subunit protein eL24 Chain: BY
Large ribosomal subunit protein uL29 Chain: BZ
Large ribosomal subunit protein uL30 Chain: Ba
Large ribosomal subunit protein eL30 Chain: Bb
Large ribosomal subunit protein eL31 Chain: Bc
Large ribosomal subunit protein eL32 Chain: Bd
Large ribosomal subunit protein eL34 Chain: Be
Large ribosomal subunit protein eL43 Chain: Bg
Large ribosomal subunit protein eL37 Chain: Bh
Large ribosomal subunit protein eL39 Chain: Bi
Large ribosomal subunit protein eL40 Chain: Bj
Small ribosomal subunit protein eS32 Chain: Bk
Large ribosomal subunit protein eL42 Chain: Bl
16S ribosomal RNA Chain: Aa
23S ribosomal RNA Chain: BA
5S ribosomal RNA Chain: BB

Ligands and Environments

Experiments and Validation Details

Entry percentile scores
Resolution: 2.55Å
Relevant EMDB volumes: EMD-10503