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Crystal structure of Bacteroides thetaiotamicron EndoBT-3987 in complex with Man9GlcNAc2Asn substrate

X-ray diffraction
1.311Å resolution
PDB entry 6tcv coloured by chain, front view.
PDB entry 6tcv coloured by chain, side view.
PDB entry 6tcv coloured by chain, top view.
Source organism: Bacteroides thetaiotaomicron VPI-5482
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: BT-3987-like N-terminal domain-containing protein
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Multimeric state: monomeric
Accessible surface area: 16146.12 Å2
Buried surface area: 3795.52 Å2
Dissociation area: 132.67 Å2
Dissociation energy (ΔGdiss): 0.26 kcal/mol
Dissociation entropy (TΔSdiss): 1.09 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-183596

Macromolecules

BT-3987-like N-terminal domain-containing protein
Chain: B
Length: 451 amino acids
Theoretical weight: 49.13 KDa
Source organism: Bacteroides thetaiotaomicron VPI-5482
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8A0N4 (Residues: 27-476; Coverage: 99%)
Gene name: BT_3987
Pfam: BT_3987-like, N-terminal domain
InterPro:
BT-3987-like N-terminal domain-containing protein in PDB entry 6tcv, assembly 1, front view.
BT-3987-like N-terminal domain-containing protein in PDB entry 6tcv, assembly 1, side view.
BT-3987-like N-terminal domain-containing protein in PDB entry 6tcv, assembly 1, top view.
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