Assemblies
Multimeric state:
hetero 80-mer
PDBe Complex ID:
PDB-CPX-122190
Macromolecules
Chains: Ab, Bb
Length: 431 amino acids
Theoretical weight: 47.75 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Mediator complex subunit 2
InterPro: Mediator complex, subunit Med2, fungi
Length: 431 amino acids
Theoretical weight: 47.75 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: Q12124 (Residues: 1-431; Coverage: 100%)
Pfam: Mediator complex subunit 2
InterPro: Mediator complex, subunit Med2, fungi
Chains: Ac, Bc
Length: 397 amino acids
Theoretical weight: 43.12 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Mediator complex subunit 3 fungal
InterPro: Mediator of RNA polymerase II transcription subunit 3
Length: 397 amino acids
Theoretical weight: 43.12 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P40356 (Residues: 1-397; Coverage: 100%)
Pfam: Mediator complex subunit 3 fungal
InterPro: Mediator of RNA polymerase II transcription subunit 3
Chains: An, Bn
Length: 1082 amino acids
Theoretical weight: 123.5 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Mediator complex subunit MED14
InterPro: Mediator complex, subunit Med14
Length: 1082 amino acids
Theoretical weight: 123.5 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P19263 (Residues: 1-1082; Coverage: 100%)
Pfam: Mediator complex subunit MED14
InterPro: Mediator complex, subunit Med14
Chains: Ae, Be
Length: 1132 amino acids
Theoretical weight: 128.92 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Mediator complex subunit Med5
InterPro: Mediator complex, subunit Med5, fungi
Length: 1132 amino acids
Theoretical weight: 128.92 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P53114 (Residues: 1-1132; Coverage: 100%)
Pfam: Mediator complex subunit Med5
InterPro: Mediator complex, subunit Med5, fungi
Chains: Ap, Bp
Length: 974 amino acids
Theoretical weight: 111.42 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam:
InterPro: Mediator complex, subunit Med16, N-terminal
Length: 974 amino acids
Theoretical weight: 111.42 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P32259 (Residues: 1-974; Coverage: 100%)
Pfam:
InterPro: Mediator complex, subunit Med16, N-terminal
Chains: GA, GB
Length: 147 amino acids
Theoretical weight: 16.9 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
Pfam:
InterPro:
Length: 147 amino acids
Theoretical weight: 16.9 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
- Canonical: P04386 (Residues: 1-147; Coverage: 17%)
Pfam:
InterPro:
Chains: At, Bt
Length: 210 amino acids
Theoretical weight: 22.92 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: TATA-binding related factor (TRF) of subunit 20 of Mediator complex
InterPro:
Length: 210 amino acids
Theoretical weight: 22.92 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P34162 (Residues: 1-210; Coverage: 100%)
Pfam: TATA-binding related factor (TRF) of subunit 20 of Mediator complex
InterPro:
Chains: Ag, Bg
Length: 222 amino acids
Theoretical weight: 25.62 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: MED7 protein
InterPro:
Length: 222 amino acids
Theoretical weight: 25.62 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: Q08278 (Residues: 1-222; Coverage: 100%)
Pfam: MED7 protein
InterPro:
Chains: Ah, Bh
Length: 223 amino acids
Theoretical weight: 25.3 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Mediator of RNA polymerase II transcription complex subunit 8
InterPro: Mediator complex, subunit Med8, fungi/metazoa
Length: 223 amino acids
Theoretical weight: 25.3 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P38304 (Residues: 1-223; Coverage: 100%)
Pfam: Mediator of RNA polymerase II transcription complex subunit 8
InterPro: Mediator complex, subunit Med8, fungi/metazoa
Chains: Ai, Bi
Length: 149 amino acids
Theoretical weight: 17.4 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: RNA polymerase II transcription mediator complex subunit 9
InterPro: Mediator of RNA polymerase II transcription subunit 9
Length: 149 amino acids
Theoretical weight: 17.4 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P33308 (Residues: 1-149; Coverage: 100%)
Pfam: RNA polymerase II transcription mediator complex subunit 9
InterPro: Mediator of RNA polymerase II transcription subunit 9
Chains: Aj, Bj
Length: 157 amino acids
Theoretical weight: 17.93 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Transcription factor subunit Med10 of Mediator complex
InterPro: Mediator complex, subunit Med10
Length: 157 amino acids
Theoretical weight: 17.93 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: Q06213 (Residues: 1-157; Coverage: 100%)
Pfam: Transcription factor subunit Med10 of Mediator complex
InterPro: Mediator complex, subunit Med10
Chains: Ak, Bk
Length: 115 amino acids
Theoretical weight: 13.32 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Mediator complex protein
InterPro: Mediator complex, subunit Med11
Length: 115 amino acids
Theoretical weight: 13.32 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: Q99278 (Residues: 1-115; Coverage: 100%)
Pfam: Mediator complex protein
InterPro: Mediator complex, subunit Med11
Chains: Aq, Bq
Length: 687 amino acids
Theoretical weight: 78.58 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Subunit 17 of Mediator complex
InterPro: Mediator complex, subunit Med17
Length: 687 amino acids
Theoretical weight: 78.58 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P32569 (Residues: 1-687; Coverage: 100%)
Pfam: Subunit 17 of Mediator complex
InterPro: Mediator complex, subunit Med17
Chains: Ar, Br
Length: 307 amino acids
Theoretical weight: 34.32 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Med18 protein
InterPro: Mediator complex, subunit Med18
Length: 307 amino acids
Theoretical weight: 34.32 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P32585 (Residues: 1-307; Coverage: 100%)
Pfam: Med18 protein
InterPro: Mediator complex, subunit Med18
Chains: As, Bs
Length: 220 amino acids
Theoretical weight: 24.89 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Rox3 mediator complex subunit
InterPro: Mediator complex, subunit Med19, fungi
Length: 220 amino acids
Theoretical weight: 24.89 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P25046 (Residues: 1-220; Coverage: 100%)
Pfam: Rox3 mediator complex subunit
InterPro: Mediator complex, subunit Med19, fungi
Chains: Au, Bu
Length: 140 amino acids
Theoretical weight: 16.09 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Subunit 21 of Mediator complex
InterPro:
Length: 140 amino acids
Theoretical weight: 16.09 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P47822 (Residues: 1-140; Coverage: 100%)
Pfam: Subunit 21 of Mediator complex
InterPro:
Chains: Av, Bv
Length: 120 amino acids
Theoretical weight: 13.77 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Surfeit locus protein 5 subunit 22 of Mediator complex
InterPro:
Length: 120 amino acids
Theoretical weight: 13.77 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P32570 (Residues: 1-120; Coverage: 99%)
Pfam: Surfeit locus protein 5 subunit 22 of Mediator complex
InterPro:
Chains: Az, Bz
Length: 25 amino acids
Theoretical weight: 2.61 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: RNA polymerase Rpb1 C-terminal repeat
InterPro: RNA polymerase II, heptapeptide repeat, eukaryotic
Length: 25 amino acids
Theoretical weight: 2.61 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P04050 (Residues: 1666-1690; Coverage: 1%)
Pfam: RNA polymerase Rpb1 C-terminal repeat
InterPro: RNA polymerase II, heptapeptide repeat, eukaryotic
Chains: AA, BA
Length: 1453 amino acids
Theoretical weight: 162.95 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam:
Length: 1453 amino acids
Theoretical weight: 162.95 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P04050 (Residues: 1-1453; Coverage: 84%)
Pfam:
- RNA polymerase Rpb1, domain 1
- RNA polymerase Rpb1, domain 2
- RNA polymerase Rpb1, domain 3
- RNA polymerase Rpb1, domain 4
- RNA polymerase Rpb1, domain 5
- RNA polymerase Rpb1, domain 6
- RNA polymerase Rpb1, domain 7
- RNA polymerase Rpb1, clamp domain superfamily
- RNA polymerase Rpb1, domain 1
- DNA-directed RNA polymerase, subunit beta-prime
- RNA polymerase, N-terminal
- RNA polymerase, alpha subunit
- RNA polymerase Rpb1, domain 3
- RNA polymerase Rpb1, domain 3 superfamily
- RNA polymerase Rpb1, funnel domain superfamily
- RNA polymerase Rpb1, domain 4
- RNA polymerase Rpb1, domain 5
- RNA polymerase Rpb1, domain 6
- RNA polymerase Rpb1, domain 7
- RNA polymerase Rpb1, domain 7 superfamily
Chains: AB, BB
Length: 1224 amino acids
Theoretical weight: 138.94 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam:
Length: 1224 amino acids
Theoretical weight: 138.94 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P08518 (Residues: 1-1224; Coverage: 100%)
Pfam:
- RNA polymerase beta subunit
- RNA polymerase Rpb2, domain 2
- RNA polymerase Rpb2, domain 3
- RNA polymerase Rpb2, domain 4
- RNA polymerase Rpb2, domain 5
- RNA polymerase Rpb2, domain 6
- RNA polymerase Rpb2, domain 7
- DNA-directed RNA polymerase, subunit 2
- RNA polymerase, beta subunit, protrusion
- RNA polymerase Rpb2, domain 2
- RNA polymerase Rpb2, domain 2 superfamily
- RNA polymerase Rpb2, domain 3
- RNA polymerase Rpb2, domain 4
- RNA polymerase Rpb2, domain 5
- DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
- DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily
- RNA polymerase Rpb2, OB-fold
- RNA polymerase, beta subunit, conserved site
- RNA polymerase Rpb2, domain 7
Chains: AC, BC
Length: 318 amino acids
Theoretical weight: 35.33 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam:
InterPro:
Length: 318 amino acids
Theoretical weight: 35.33 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P16370 (Residues: 1-318; Coverage: 100%)
Pfam:
InterPro:
Chains: AD, BD
Length: 221 amino acids
Theoretical weight: 25.45 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: RNA polymerase Rpb4
InterPro:
Length: 221 amino acids
Theoretical weight: 25.45 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P20433 (Residues: 1-221; Coverage: 100%)
Pfam: RNA polymerase Rpb4
InterPro:
Chains: AF, BF
Length: 155 amino acids
Theoretical weight: 17.93 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: RNA polymerase Rpb6
InterPro:
Length: 155 amino acids
Theoretical weight: 17.93 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P20435 (Residues: 1-155; Coverage: 100%)
Pfam: RNA polymerase Rpb6
InterPro:
Chains: AG, BG
Length: 171 amino acids
Theoretical weight: 19.08 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam:
InterPro:
Length: 171 amino acids
Theoretical weight: 19.08 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P34087 (Residues: 1-171; Coverage: 100%)
Pfam:
InterPro:
Chains: AH, BH
Length: 146 amino acids
Theoretical weight: 16.53 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: RNA polymerase Rpb8
InterPro:
Length: 146 amino acids
Theoretical weight: 16.53 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P20436 (Residues: 1-146; Coverage: 100%)
Pfam: RNA polymerase Rpb8
InterPro:
Chains: AI, BI
Length: 122 amino acids
Theoretical weight: 14.31 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam:
InterPro:
Length: 122 amino acids
Theoretical weight: 14.31 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P27999 (Residues: 1-122; Coverage: 100%)
Pfam:
InterPro:
Chains: AJ, BJ
Length: 70 amino acids
Theoretical weight: 8.29 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: RNA polymerases N / 8 kDa subunit
InterPro:
Length: 70 amino acids
Theoretical weight: 8.29 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P22139 (Residues: 1-70; Coverage: 100%)
Pfam: RNA polymerases N / 8 kDa subunit
InterPro:
Chains: AK, BK
Length: 120 amino acids
Theoretical weight: 13.63 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: RNA polymerase Rpb3/Rpb11 dimerisation domain
InterPro:
Length: 120 amino acids
Theoretical weight: 13.63 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P38902 (Residues: 1-120; Coverage: 100%)
Pfam: RNA polymerase Rpb3/Rpb11 dimerisation domain
InterPro:
Chains: AL, BL
Length: 70 amino acids
Theoretical weight: 7.73 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: DNA directed RNA polymerase, 7 kDa subunit
InterPro:
Length: 70 amino acids
Theoretical weight: 7.73 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P40422 (Residues: 1-70; Coverage: 100%)
Pfam: DNA directed RNA polymerase, 7 kDa subunit
InterPro:
Chains: AM, BM
Length: 345 amino acids
Theoretical weight: 38.26 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam:
InterPro:
Length: 345 amino acids
Theoretical weight: 38.26 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P29055 (Residues: 1-345; Coverage: 100%)
Pfam:
InterPro:
Chains: AP, BP
Length: 735 amino acids
Theoretical weight: 82.32 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
InterPro:
Length: 735 amino acids
Theoretical weight: 82.32 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P41895 (Residues: 1-735; Coverage: 100%)
Pfam: Transcription initiation factor IIF, alpha subunit (TFIIF-alpha)
InterPro:
Chains: AQ, BQ
Length: 400 amino acids
Theoretical weight: 46.68 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam:
InterPro:
Length: 400 amino acids
Theoretical weight: 46.68 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P41896 (Residues: 1-400; Coverage: 100%)
Pfam:
InterPro:
Chains: AS, BS
Length: 309 amino acids
Theoretical weight: 34.9 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
Pfam:
Length: 309 amino acids
Theoretical weight: 34.9 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
- Canonical: P07273 (Residues: 1-309; Coverage: 100%)
Pfam:
- Transcription factor S-II (TFIIS)
- TFIIS helical bundle-like domain
- Transcription factor S-II (TFIIS), central domain
- Zinc finger, TFIIS-type
- Transcription elongation factor, IIS-type
- TFIIS/LEDGF domain superfamily
- Transcription elongation factor, TFIIS
- Transcription factor IIS, N-terminal
- Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
- Transcription elongation factor S-II, central domain superfamily
- Transcription elongation factor S-II, central domain
Chains: Aa, Ba
Length: 566 amino acids
Theoretical weight: 64.31 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Mediator of RNA polymerase II transcription subunit 1
InterPro: Mediator complex, subunit Med1
Length: 566 amino acids
Theoretical weight: 64.31 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: Q12321 (Residues: 1-566; Coverage: 100%)
Pfam: Mediator of RNA polymerase II transcription subunit 1
InterPro: Mediator complex, subunit Med1
Chains: Ad, Bd
Length: 284 amino acids
Theoretical weight: 32.24 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: Vitamin-D-receptor interacting Mediator subunit 4
InterPro: Mediator complex, subunit Med4
Length: 284 amino acids
Theoretical weight: 32.24 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: Q12343 (Residues: 1-284; Coverage: 100%)
Pfam: Vitamin-D-receptor interacting Mediator subunit 4
InterPro: Mediator complex, subunit Med4
Chains: Af, Bf
Length: 295 amino acids
Theoretical weight: 32.84 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
Pfam: MED6 mediator sub complex component
InterPro:
Length: 295 amino acids
Theoretical weight: 32.84 KDa
Source organism: Saccharomyces cerevisiae S288C
UniProt:
- Canonical: P38782 (Residues: 1-295; Coverage: 100%)
Pfam: MED6 mediator sub complex component
InterPro: