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Prefusion-stabilized Nipah virus fusion protein complexed with Fab 1H1

Electron Microscopy
3Å resolution
PDB entry 7upb coloured by chain, front view.
PDB entry 7upb coloured by chain, side view.
PDB entry 7upb coloured by chain, top view.
Source organism: Mus musculus
Assembly composition:
hetero nonamer (preferred)
Entry contents: 3 distinct polypeptide molecules

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Fusion glycoprotein F1 and IG-heavy chain and IG-light kappa chain
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Multimeric state: hetero nonamer
Accessible surface area: 79988.15 Å2
Buried surface area: 28263.97 Å2
Dissociation area: 4,438.15 Å2
Dissociation energy (ΔGdiss): -5.02 kcal/mol
Dissociation entropy (TΔSdiss): 73.62 kcal/mol
Symmetry number: 3
PDBe Complex ID: PDB-CPX-212752

Macromolecules

Fusion glycoprotein F0
Chains: A, D, G
Length: 475 amino acids
Theoretical weight: 52.3 KDa
UniProt:
  • Canonical: Q9IH63 (Residues: 1-475; Coverage: 86%)
Gene name: F
Pfam: Fusion glycoprotein F0
InterPro: Precursor fusion glycoprotein F0, Paramyxoviridae
Fusion glycoprotein F0 in PDB entry 7upb, assembly 1, front view.
Fusion glycoprotein F0 in PDB entry 7upb, assembly 1, side view.
Fusion glycoprotein F0 in PDB entry 7upb, assembly 1, top view.
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Fab 1H1 heavy chain
Chains: B, C, H
Length: 120 amino acids
Theoretical weight: 13.19 KDa
Source organism: Mus musculus
Expression system: Homo sapiens
InterPro:
Fab 1H1 heavy chain in PDB entry 7upb, assembly 1, front view.
Fab 1H1 heavy chain in PDB entry 7upb, assembly 1, side view.
Fab 1H1 heavy chain in PDB entry 7upb, assembly 1, top view.
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Fab 1H1 light chain
Chains: E, F, L
Length: 106 amino acids
Theoretical weight: 11.68 KDa
Source organism: Mus musculus
Expression system: Homo sapiens
InterPro:
Fab 1H1 light chain in PDB entry 7upb, assembly 1, front view.
Fab 1H1 light chain in PDB entry 7upb, assembly 1, side view.
Fab 1H1 light chain in PDB entry 7upb, assembly 1, top view.
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