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Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 8.5

Electron Microscopy
3.13Å resolution
PDB entry 7xpf coloured by chain, front view.
PDB entry 7xpf coloured by chain, side view.
PDB entry 7xpf coloured by chain, top view.
Source organism: Lake Sinai virus 2
Assembly composition:
homo 180-mer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Capsid protein alpha
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Multimeric state: homo 180-mer
Accessible surface area: 2793007.41 Å2
Buried surface area: 887703.5 Å2
Dissociation area: 86,003.97 Å2
Dissociation energy (ΔGdiss): -68.94 kcal/mol
Dissociation entropy (TΔSdiss): 1,026.9 kcal/mol
Symmetry number: 60
PDBe Complex ID: PDB-CPX-123728

Macromolecules

Capsid protein alpha
Chains: A, B, C
Length: 520 amino acids
Theoretical weight: 57.34 KDa
Source organism: Lake Sinai virus 2
Expression system: Escherichia coli
UniProt:
  • Canonical: F8TEV4 (Residues: 1-520; Coverage: 100%)
InterPro: Viral coat protein subunit
Capsid protein alpha in PDB entry 7xpf, assembly 1, front view.
Capsid protein alpha in PDB entry 7xpf, assembly 1, side view.
Capsid protein alpha in PDB entry 7xpf, assembly 1, top view.
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