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Cell surface protein YwfG protein complexed with mannose

X-ray diffraction
3Å resolution
PDB entry 7yl5 coloured by chain, front view.
PDB entry 7yl5 coloured by chain, side view.
PDB entry 7yl5 coloured by chain, top view.
Source organism: Lactococcus lactis subsp. lactis
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Gram-positive cocci surface proteins LPxTG domain-containing protein
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Multimeric state: monomeric
Accessible surface area: 22831.27 Å2
Buried surface area: 1871.63 Å2
Dissociation area: 174.41 Å2
Dissociation energy (ΔGdiss): 2.26 kcal/mol
Dissociation entropy (TΔSdiss): 2.55 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-217882
Assembly 2
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Assembly Name: Gram-positive cocci surface proteins LPxTG domain-containing protein
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Multimeric state: monomeric
Accessible surface area: 18256.18 Å2
Buried surface area: 2982.95 Å2
Dissociation area: 149.83 Å2
Dissociation energy (ΔGdiss): -1.17 kcal/mol
Dissociation entropy (TΔSdiss): 2.51 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-217882

Macromolecules

Gram-positive cocci surface proteins LPxTG domain-containing protein
Chains: A, B
Length: 505 amino acids
Theoretical weight: 54.04 KDa
Source organism: Lactococcus lactis subsp. lactis
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: S6FKX6 (Residues: 28-511; Coverage: 52%)
Gene names: O9U_11750, llmg_2465
Pfam:
Gram-positive cocci surface proteins LPxTG domain-containing protein in PDB entry 7yl5, assembly 1, front view.
Gram-positive cocci surface proteins LPxTG domain-containing protein in PDB entry 7yl5, assembly 1, side view.
Gram-positive cocci surface proteins LPxTG domain-containing protein in PDB entry 7yl5, assembly 1, top view.
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