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Structure of S79 Fab in complex with IgV domain of human PD-L1

X-ray diffraction
2.794Å resolution
PDB entry 8rpb coloured by chain, front view.
PDB entry 8rpb coloured by chain, side view.
PDB entry 8rpb coloured by chain, top view.
Source organism: Homo sapiens
Assembly composition:
hetero trimer (preferred)
Entry contents: 3 distinct polypeptide molecules

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Programmed cell death 1 ligand 1 and IG-heavy chain and IG-light lambda chain
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Multimeric state: hetero trimer
Accessible surface area: 24528.16 Å2
Buried surface area: 6934.76 Å2
Dissociation area: 913.55 Å2
Dissociation energy (ΔGdiss): 4.22 kcal/mol
Dissociation entropy (TΔSdiss): 12.02 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-246103

Macromolecules

heavy chain of S79 fab
Chain: H
Length: 223 amino acids
Theoretical weight: 23.47 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
heavy chain of S79 fab in PDB entry 8rpb, assembly 1, front view.
heavy chain of S79 fab in PDB entry 8rpb, assembly 1, side view.
heavy chain of S79 fab in PDB entry 8rpb, assembly 1, top view.
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light chain of S79 fab
Chain: L
Length: 217 amino acids
Theoretical weight: 22.93 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
light chain of S79 fab in PDB entry 8rpb, assembly 1, front view.
light chain of S79 fab in PDB entry 8rpb, assembly 1, side view.
light chain of S79 fab in PDB entry 8rpb, assembly 1, top view.
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Programmed cell death 1 ligand 1
Chain: P
Length: 125 amino acids
Theoretical weight: 14.34 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
Programmed cell death 1 ligand 1 in PDB entry 8rpb, assembly 1, front view.
Programmed cell death 1 ligand 1 in PDB entry 8rpb, assembly 1, side view.
Programmed cell death 1 ligand 1 in PDB entry 8rpb, assembly 1, top view.
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