PDB 9c81 biological assemblies and structure analysis ‹ Protein Data Bank in Europe (PDBe)

Assemblies

Assembly 1 (preferred)

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Assembly Name: Beta-lactamase
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Multimeric state: monomeric

Accessible surface area: 14389.27 Å²

Buried surface area: 0.0 Å²

Dissociation area: 0 Å²

Dissociation energy (ΔG^diss): 0 kcal/mol

Dissociation entropy (TΔS^diss): 0 kcal/mol

Symmetry number: 1

PDBe Complex ID: PDB-CPX-133599

$Monomeric assembly 1 of PDB entry 9c81 coloured by chemically distinct molecules, front view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>1 copy of Beta-lactamase;</li> <li class='image_legend_li'>1 copy of (2R)-2-phenoxy-3-{[(1S,2S,4S)-spiro[bicyclo[2.2.1]heptane-7,1'-cyclopropane]-2-carbonyl]amino}propanoic acid;</li> <li class='image_legend_li'>1 copy of water.</li></ul>}$

$Monomeric assembly 1 of PDB entry 9c81 coloured by chemically distinct molecules, side view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>1 copy of Beta-lactamase;</li> <li class='image_legend_li'>1 copy of (2R)-2-phenoxy-3-{[(1S,2S,4S)-spiro[bicyclo[2.2.1]heptane-7,1'-cyclopropane]-2-carbonyl]amino}propanoic acid;</li> <li class='image_legend_li'>1 copy of water.</li></ul>}$

$Monomeric assembly 1 of PDB entry 9c81 coloured by chemically distinct molecules, top view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>1 copy of Beta-lactamase;</li> <li class='image_legend_li'>1 copy of (2R)-2-phenoxy-3-{[(1S,2S,4S)-spiro[bicyclo[2.2.1]heptane-7,1'-cyclopropane]-2-carbonyl]amino}propanoic acid;</li> <li class='image_legend_li'>1 copy of water.</li></ul>}$

Assembly 2

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Assembly Name: Beta-lactamase
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Multimeric state: monomeric

Accessible surface area: 14175.46 Å²

Buried surface area: 0.0 Å²

Dissociation area: 0 Å²

Dissociation energy (ΔG^diss): 0 kcal/mol

Dissociation entropy (TΔS^diss): 0 kcal/mol

Symmetry number: 1

PDBe Complex ID: PDB-CPX-133599

$Monomeric assembly 2 of PDB entry 9c81 coloured by chemically distinct molecules, front view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>1 copy of Beta-lactamase;</li> <li class='image_legend_li'>1 copy of (2R)-2-phenoxy-3-{[(1S,2S,4S)-spiro[bicyclo[2.2.1]heptane-7,1'-cyclopropane]-2-carbonyl]amino}propanoic acid;</li> <li class='image_legend_li'>1 copy of water.</li></ul>}$

$Monomeric assembly 2 of PDB entry 9c81 coloured by chemically distinct molecules, side view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>1 copy of Beta-lactamase;</li> <li class='image_legend_li'>1 copy of (2R)-2-phenoxy-3-{[(1S,2S,4S)-spiro[bicyclo[2.2.1]heptane-7,1'-cyclopropane]-2-carbonyl]amino}propanoic acid;</li> <li class='image_legend_li'>1 copy of water.</li></ul>}$

$Monomeric assembly 2 of PDB entry 9c81 coloured by chemically distinct molecules, top view. This structure contains: <ul class='image_legend_ul'><li class='image_legend_li'>1 copy of Beta-lactamase;</li> <li class='image_legend_li'>1 copy of (2R)-2-phenoxy-3-{[(1S,2S,4S)-spiro[bicyclo[2.2.1]heptane-7,1'-cyclopropane]-2-carbonyl]amino}propanoic acid;</li> <li class='image_legend_li'>1 copy of water.</li></ul>}$

Macromolecules

Beta-lactamase

Chains: A, B
Length: 377 amino acids
Theoretical weight: 41.59 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:

Canonical: P00811 (Residues: 1-377; Coverage: 100%)

Gene names: JW4111, ampA, ampC, b4150
Pfam: Beta-lactamase

Beta-lactamase in PDB entry 9c81, assembly 1, front view.

Beta-lactamase in PDB entry 9c81, assembly 1, side view.

Beta-lactamase in PDB entry 9c81, assembly 1, top view.

FASTA Sequence


    >pdb|9c81|A B

MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGMAVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLSDPTTKYWPELTAKQWNGITLLHLATYTAGGLPLQVPDEVKSSSDLLRFYQNWQPAWAPGTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWGYREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLKPLDINEKTLQQGIQLAQSRYWQTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAITPPTPAVRASWVHKTGATGGFGSYVAFIPEKELGIVMLANKNYPNPARVDAAWQILNALQ

PDBe-KB: UniProt Coverage View: P00811

Molecule details ›

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FASTA (Protein chains A, B)
Compatible PDB file bundle (tar.gz)
Archive mmCIF file
Updated mmCIF file
PDBML
PDBML (ATOM lines)
PDBML (no atoms)
Structure Factors
SIFTS XML file with residue-level mappings

Search similar proteins

Similar 3D structures (PDBeFold)
Similar sequences

BLAST P00811 (UniProt)

Protein Data Bank in Europe

X-ray crystal structure of AmpC beta-lactamase with inhibitor

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Assemblies

Assembly 1 (preferred)

Assembly 2

Macromolecules

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PDBe › 9c81 › Structure analysis

X-ray crystal structure of AmpC beta-lactamase with inhibitor

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Assemblies

Assembly 1 (preferred)

Assembly 2

Macromolecules

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9c81 › Structure analysis