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Introducing Mol*: fast, interactive 3D visualisation in your browser at RCSB PDB and PDBe

Introducing Mol*: fast, interactive 3D visualisation in your browser at RCSB PDB and PDBe

Access Mol*, a new 3D molecular viewer developed in collaboration between RCSB PDB, PDBe, and CEITEC, from RCSB PDB and PDBe pages. This new viewer allows fast visualisation of molecular structures and their corresponding data, along with high quality rendering within the browser window.

Updated PDBe tools and pages described in new publication

Updated PDBe tools and pages described in new publication

The recent updates and improvements to the PDBe website and tools have been reported in a new publication in Nucleic Acids Research.

Conservation and variation in PDBe-KB protein pages

Conservation and variation in PDBe-KB protein pages

The PDBe-KB aggregated views of proteins now have even more information, including sequence conservation, CATHb domains and UniProt variation data, along with faster loading times. 

Additional EM map validation now available through OneDep

Additional EM map validation now available through OneDep

The wwPDB validation reports provided in the OneDep system now have additional validation for electron microscopy (EM) maps to help users identify potential discrepancies in their data.

Linking UniProtKB proteins to structures via PDBe-KB

Linking UniProtKB proteins to structures via PDBe-KB

The PDBe and Protein Function teams at EMBL-EBI are pleased to announce that UniProtKB entry pages now have direct links to PDBe-KB’s aggregated views for proteins.

New publication describing the PDBe-KB resource

New publication describing the PDBe-KB resource

A new publication, describing the community-driven PDBe-KB resource, is now available in Nucleic Acids Research.

PDB DOIs now directed to wwPDB entry pages

PDB DOIs now directed to wwPDB entry pages

The wwPDB partners are pleased to announce an improved mechanism for the resolution of digital object identifiers (DOIs) associated with released PDB entries. We have launched new wwPDB landing web-pages for each released PDB entry.

Links added to raw experimental data at PDBe

Links added to raw experimental data at PDBe

The model file in the PDB is the culmination of much hard work and interpretation of raw experimental data.

Improve your previously released PDB coordinates with OneDep

Improve your previously released PDB coordinates with OneDep

The wwPDB are pleased to announce the availability of PDB versioning, allowing depositors to update their entries while retaining the same PDB accession code.

A celebration of the PDB Art project

A celebration of the PDB Art project

This week we celebrated the 4th year of the PDB Art project, at our public exhibition at the Micha

Mandatory mmCIF format for crystallographic depositions to the PDB

Mandatory mmCIF format for crystallographic depositions to the PDB

From today, July 1st 2019, submission of PDBx/mmCIF format files for crystallographic depositions to the PDB is mandatory.

Improvements to wwPDB validation reports

Improvements to wwPDB validation reports

The recent update made to the wwPDB validation reports gives much clearer validation information for ligands.