News

More download options and antibody annotations on the PDBe-KB COVID-19 pages

More download options and antibody annotations on the PDBe-KB COVID-19 pages

We recently announced the new PDBe-KB COVID-19 data portal. We have now added annotations on antibody classifications and details of peptide inhibitor molecules to the interactions section. In addition, we have also extended the bulk download options to entries with specific ligands or…

Test the new sequence and ligand components at PDBe

Test the new sequence and ligand components at PDBe

  We are delighted to offer two new components available for beta testing on our PDBe entry pages: the ProtVista sequence component on the PDBe macromolecules pages and the LigEnv component on the ligands and environments pages.

Download service and similar proteins data added to PDBe-KB COVID-19 pages

Download service and similar proteins data added to PDBe-KB COVID-19 pages

We recently announced the new PDBe-KB COVID-19 data portal, allowing users to easily access a wealth of structural data from the SARS-CoV-2 virus.

New PDBe-KB COVID-19 Data Portal

New PDBe-KB COVID-19 Data Portal

Our new PDBe-KB COVID-19 data portal brings together all available PDB data from SARS-CoV-2 structures, to help researchers easily identify important structural features to support the development of treatments and vaccines.

wwPDB biocuration priorities during the COVID-19 pandemic

wwPDB biocuration priorities during the COVID-19 pandemic

The wwPDB is reviewing and prioritising its biocuration activities, in the face of potentially reduced staff capacity during the COVID-19 pandemic.

Improved visualisation and more at the aggregated views of proteins from PDBe-KB

Improved visualisation and more at the aggregated views of proteins from PDBe-KB

We have now introduced a number of visualisation improvements to the PDBe-KB aggregated views of proteins, including the new Mol* viewer.

Help us design PDBe-KB's aggregated views of small molecules

Help us design PDBe-KB's aggregated views of small molecules

PDBe-KB is a community-driven resource managed by the Protein Data Bank in Europe (PDBe) team, integrating functional annotations and structure data in the PDB archive.

Distribution of NMR data in a unified format at the PDB archive

Distribution of NMR data in a unified format at the PDB archive

The wwPDB partners are pleased to announce that as of March 2020 the OneDep system will begin accepting upload of NMR experimental data as a single file, either in NMR-STAR or NEF format.

EMDB policy and procedures document now available

EMDB policy and procedures document now available

A comprehensive policy and procedures document for the EMDB archive has been drawn up by the EMDB team in order to ensure consistent and coherent rules for its data. The document is now available to view on the EMDB website.

Time-stamped Copies of the wwPDB Archives Available

Time-stamped Copies of the wwPDB Archives Available

A snapshot of the PDB Core Archive (ftp://ftp.wwpdb.org) as of January 1, 2020 has been added to ftp://snapshots.w

2020 calendar: Emotions in Science

2020 calendar: Emotions in Science

'Tis the season for the new PDBe calendar! Our calendar for 2020 is now available to view and print - just in time for the New Year.

In memoriam, Cyrus Chothia (1942-2019)

In memoriam, Cyrus Chothia (1942-2019)

We noted with great sadness the passing of Cyrus Chothia. Cyrus has been a giant in understanding protein structures, their function and evolution over many years.