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Literature for family C1

Family

Summary Holotypes Alignment Tree Genomes Structure Literature H-seq M-seq Architecture

C1A

Summary Holotypes Alignment Tree Genomes Literature

C1B

Summary Holotypes Alignment Tree Genomes Literature

(Topics flags: S Structure, A Assay, I Inhibitor, V Review. To select only the references relevant to a single topic, click the link above. See explanation.)

    2024
  1. Duran,S., Ustuntanir Dede,A.F., Dundar Orhan,Y. and Arslanyolu,M. \<br\>Genome-wide identification and in-silico analysis of papain-family cysteine protease encoding genes in Tetrahymena thermophila\<br\>Eur J Protistol (2024) 92, 126033. PubMed  Europe PubMed DOI
  2. Xie,Q., Yao,T., Sun,X., Liu,X. and Wang,X. \<br\>Whole genome identification of olive flounder (Paralichthys olivaceus) cathepsin genes: Provides insights into its regulation on biotic and abiotic stresses response\<br\>Aquat Toxicol (2024) 266, 106783. PubMed  Europe PubMed DOI
    3. 2023
  3. Nicolau,I., Hadade,N.D., Matache,M. and Funeriu,D.P. \<br\>Synthetic Approaches of Epoxysuccinate Chemical Probes\<br\>Chembiochem (2023) e202300157. PubMed  Europe PubMed DOI  V
    4. 2022
  4. Li,Y., Li,X., Zhang,P., Chen,D., Tao,X., Cao,M., Li,C. and Fu,Q. \<br\>Genome-Wide Identification, Evolutionary Analysis, and Expression Patterns of Cathepsin Superfamily in Black Rockfish (Sebastes schlegelii) following Aeromonas salmonicida Infection\<br\>Mar Drugs (2022) 20, PubMed  Europe PubMed DOI  PMC  EPMC
  5. Petushkova,A.I., Savvateeva,L.V. and Zamyatnin,A.A., Jr. \<br\>Structure determinants defining the specificity of papain-like cysteine proteases\<br\>Comput Struct Biotechnol J (2022) 20, 6552-6569. PubMed  Europe PubMed DOI  PMC  EPMC
    6. 2021
  6. Romero,A., Novoa,B. and Figueras,A. \<br\>Genomic and transcriptomic identification of the cathepsin superfamily in the Mediterranean mussel Mytilus galloprovincialis\<br\>Dev Comp Immunol (2021) 127, 104286. PubMed  Europe PubMed DOI
    7. 2019
  7. Liu,C., Barrett,T.M., Chen,X., Ferrie,J.J. and Petersson,E.J. \<br\>Fluorescent probes for studying thioamide positional effects on proteolysis reveal insight into resistance to cysteine proteases\<br\>Chembiochem (2019) 20, 2059-2062. PubMed  Europe PubMed DOI  I
  8. Zhang,S., Xu,Z., Sun,H., Sun,L., Shaban,M., Yang,X. and Zhu,L. \<br\>Genome-wide identification of papain-like cysteine proteases in Gossypium hirsutum and functional characterization in response to Verticillium dahliae\<br\>Front Plant Sci (2019) 10, 134. PubMed  Europe PubMed DOI  PMC  EPMC
    9. 2018
  9. Gong,X., Zhao,X., Zhang,W., Wang,J., Chen,X., Hameed,M.F., Zhang,N. and Ge,H. \<br\>Structural characterization of the hypothetical protein Lpg2622, a new member of the C1 family peptidases from Legionella pneumophila\<br\>FEBS Lett (2018) 592, 2798-2810. PubMed  Europe PubMed DOI
  10. Liu,C.L., Guo,J., Zhang,X., Sukhova,G.K., Libby,P. and Shi,G.P. \<br\>Cysteine protease cathepsins in cardiovascular disease: from basic research to clinical trials\<br\>Nat Rev Cardiol (2018) 15, 351-370. PubMed  Europe PubMed DOI
  11. Liu,H., Hu,M., Wang,Q., Cheng,L. and Zhang,Z. \<br\>Role of papain-like cysteine proteases in plant development\<br\>Front Plant Sci (2018) 9, 1717. PubMed  Europe PubMed DOI  PMC  EPMC
    12. 2017
  12. Zou,Z., Xie,G. and Yang,L. \<br\>Papain-like cysteine protease encoding genes in rubber (Hevea brasiliensis): comparative genomics, phylogenetic, and transcriptional profiling analysis\<br\>Planta (2017) 246, 999-1018. PubMed  Europe PubMed DOI
    13. 2015
  13. Riesgo,A., Maldonado,M., Lopez-Legentil,S. and Giribet,G. \<br\>A proposal for the evolution of cathepsin and silicatein in sponges\<br\>J Mol Evol (2015) 80, 278-291. PubMed  Europe PubMed DOI
  14. Zhou,J., Zhang,Y.Y., Li,Q.Y. and Cai,Z.H. \<br\>Evolutionary history of cathepsin L (L-like) family genes in vertebrates\<br\>Int J Biol Sci (2015) 11, 1016-1025. PubMed  Europe PubMed DOI  PMC  EPMC
    15. 2014
  15. Semashko,T.A., Vorotnikova,E.A., Sharikova,V.F., Vinokurov,K.S., Smirnova,Y.A., Dunaevsky,Y.E., Belozersky,M.A., Oppert,B., Elpidina,E.N. and Filippova,I.Y. \<br\>Selective chromogenic and fluorogenic peptide substrates for the assay of cysteine peptidases in complex mixtures\<br\>Anal Biochem (2014) 449, 179-187. PubMed  Europe PubMed DOI  A
    16. 2013
  16. Novinec,M. and Lenarcic,B. \<br\>Papain-like peptidases: structure, function, and evolution\<br\>Biomol Concept (2013) 4, 287-308. PubMed  Europe PubMed DOI
    17. 2008
  17. Mladenovic,M., Fink,R.F., Thiel,W., Schirmeister,T. and Engels,B. \<br\>On the origin of the stabilization of the zwitterionic resting state of cysteine proteases: a theoretical study\<br\>J Am Chem Soc (2008) 130, 8696-8705. PubMed  Europe PubMed DOI
    18. 2004
  18. Papamichael,E.M., Theodorou,L.G. and Bieth,J.G. \<br\>Insight into catalytic mechanism of papain-like cysteine proteinases: the case of D158\<br\>Appl Biochem Biotechnol (2004) 118, 171-175. PubMed  Europe PubMed DOI
    19. 2002
  19. Bromme,D. and Kaleta,J. \<br\>Thiol-dependent cathepsins: pathophysiological implications and recent advances in inhibitor design\<br\>Curr Pharm Des (2002) 8, 1639-1658. PubMed  Europe PubMed DOI  V
  20. Leung-Toung,R., Li,W., Tam,T.F. and Karimian,K. \<br\>Thiol-dependent enzymes and their inhibitors: a review\<br\>Curr Med Chem (2002) 9, 979-1002. PubMed  Europe PubMed  I
    21. 2000
  21. Brinkworth,R.I., Tort,J.F., Brindley,P.J. and Dalton,J.P. \<br\>Phylogenetic relationships and theoretical model of human cathepsin W (lymphopain), a cysteine proteinase from cytotoxic T lymphocytes\<br\>Int J Biochem Cell Biol (2000) 32, 373-384. PubMed  Europe PubMed DOI
    22. 1999
  22. McGrath,M.E. \<br\>The lysosomal cysteine proteases\<br\>Annu Rev Biophys Biomol Struct (1999) 28, 181-204. PubMed  Europe PubMed DOI  S
  23. [YEAR:13-4-1999]Nagler,D.K., Tam,W., Storer,A.C., Krupa,J.C., Mort,J.S. and Menard,R. \<br\>Interdependency of sequence and positional specificities for cysteine proteases of the papain family\<br\>Biochemistry (13-4-1999) 38, 4868-4874. PubMed  Europe PubMed DOI
    24. 1998
  24. [YEAR:26-5-1998]Shimizu,K., Cha,J., Stucky,G.D. and Morse,D.E. \<br\>Silicatein alpha: cathepsin L-like protein in sponge biosilica\<br\>Proc Natl Acad Sci U S A (26-5-1998) 95, 6234-6238. PubMed  Europe PubMed DOI  PMC  EPMC
    25. 1997
  25. Cygler,M. and Mort,J.S. \<br\>Proregion structure of members of the papain superfamily. Mode of inhibition of enzymatic activity\<br\>Biochimie (1997) 79, 645-652. PubMed  Europe PubMed DOI
  26. Ward,W., Alvarado,L., Rawlings,N.D., Engel,J.C., Franklin,C. and McKerrow,J.H. \<br\>A primitive enzyme for a primitive cell: the protease required for excystation of Giardia\<br\>Cell (1997) 89, 437-444. PubMed  Europe PubMed DOI
    27. 1996
  27. Storer,A.C. and Menard,R. \<br\>Recent insights into cysteine protease specificity: lessons for drug design\<br\>Perspect Drug Discov Design (1996) 6, 33-46.
    28. 1995
  28. Berti,P.J. and Storer,A.C. \<br\>Alignment/phylogeny of the papain superfamily of cysteine proteases\<br\>J Mol Biol (1995) 246, 273-283. PubMed  Europe PubMed DOI
    29. 1994
  29. Storer,A.C. and Menard,R. \<br\>Catalytic mechanism in papain family of cysteine peptidases\<br\>Methods Enzymol (1994) 244, 486-500. PubMed  Europe PubMed DOI  V
    30. 1991
  30. Keillor,J.W. and Brown,R.S. \<br\>Reaction of a distorted amide with nucleophilic thiolate-containing zwitterions produced from thiolamines. A model for the acylation step in cysteine proteases and transglutaminases\<br\>J Am Chem Soc (1991) 113, 5114-5116.
    31. 1990
  31. Shaw,E. \<br\>Cysteinyl proteinases and their selective inactivation\<br\>Adv Enzymol Relat Areas Mol Biol (1990) 63, 271-347. PubMed  Europe PubMed  V  I
    32. 1987
  32. Brocklehurst,K., Willenbrock,F. and Salih,E. \<br\>Cysteine proteinases\<br\> (1987) 39-158.
    33. 1985
  33. Kamphuis,I.G., Drenth,J. and Baker,E.N. \<br\>Thiol proteases. Comparative studies based on the high-resolution structures of papain and actinidin, and on amino acid sequence information for cathepsins B and H, and stem bromelain\<br\>J Mol Biol (1985) 182, 317-329. PubMed  Europe PubMed  S
    34. 1982
  34. Barrett,A.J., Kembhavi,A.A., Brown,M.A., Kirschke,H., Knight,C.G., Tamai,M. and Hanada,K. \<br\>L-trans-Epoxysuccinyl-leucylamido(4-guanidino)butane (E-64) and its analogues as inhibitors of cysteine proteinases including cathepsins B, H and L\<br\>Biochem J (1982) 201, 189-198. PubMed  Europe PubMed  PMC  EPMC  I
    35. 1976
  35. Lowe,G. \<br\>The cysteine proteinases\<br\>Tetrahedron (1976) 32, 291-302.  V

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